FFCP PHASE1:Hg19::chrX:80370650..80370666,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:80370650..80370666,- | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_at_chrX:80370650..80370666,- | |||
|id=chrX:80370650..80370666,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.24e-16!51;DOID:0060083!2.24e-16!51;DOID:1240!6.50e-14!39;DOID:162!3.78e-13!235;DOID:14566!7.58e-13!239;DOID:8692!2.03e-11!31;DOID:0050686!1.97e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.56e-13;39!DOID:2531;1.96e-12;51!DOID:0060083;1.96e-12;51!DOID:8692;3.86e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.98e-19,51;DOID:0060083,2.98e-19,51;DOID:1240,3.45e-16,39;DOID:162,1.57e-10,235;DOID:14566,4.73e-10,239;DOID:8692,1.88e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-12!57;UBERON:0005068!3.55e-12!57;UBERON:0006241!3.55e-12!57;UBERON:0007135!3.55e-12!57;UBERON:0003080!5.72e-12!42;UBERON:0002780!1.44e-11!41;UBERON:0001890!1.44e-11!41;UBERON:0006240!1.44e-11!41;UBERON:0001017!1.04e-10!82;UBERON:0005743!2.28e-10!86;UBERON:0000073!3.63e-10!94;UBERON:0001016!3.63e-10!94;UBERON:0002346!1.22e-09!90;UBERON:0002616!2.16e-09!59;UBERON:0002020!4.83e-09!34;UBERON:0003528!4.83e-09!34;UBERON:0007023!8.40e-09!115;UBERON:0003075!9.07e-09!86;UBERON:0007284!9.07e-09!86;UBERON:0003056!2.71e-08!61;UBERON:0000955!3.17e-08!69;UBERON:0006238!3.17e-08!69;UBERON:0001893!3.95e-08!34;UBERON:0002791!4.07e-08!33;UBERON:0001869!1.46e-07!32;UBERON:0001737!9.07e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.03e-10;9!UBERON:0001557;2.03e-10;9!UBERON:0002780;1.16e-09;41!UBERON:0001890;1.16e-09;41!UBERON:0003296;2.49e-09;4!UBERON:0010133;2.49e-09;4!UBERON:0003528;6.87e-08;34!UBERON:0002020;6.87e-08;34!UBERON:0001894;1.04e-07;7!UBERON:0000125;1.73e-07;9!UBERON:0002308;1.73e-07;9!UBERON:0000073;1.87e-07;53!UBERON:0002616;1.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.12e-13,56;UBERON:0005068,4.12e-13,56;UBERON:0006241,4.12e-13,56;UBERON:0007135,4.12e-13,56;UBERON:0002780,1.69e-11,41;UBERON:0001890,1.69e-11,41;UBERON:0003080,1.69e-11,41;UBERON:0006240,1.69e-11,41;UBERON:0000073,2.38e-11,53;UBERON:0002616,2.38e-11,53;UBERON:0002346,4.97e-11,86;UBERON:0001737,3.62e-10,9;UBERON:0001017,7.38e-10,81;UBERON:0003528,1.93e-09,34;UBERON:0002020,1.93e-09,34;UBERON:0003296,2.61e-09,4;UBERON:0010133,2.61e-09,4;UBERON:0001016,3.24e-09,89;UBERON:0003075,5.36e-09,82;UBERON:0007284,5.36e-09,82;UBERON:0003056,2.57e-08,61;UBERON:0001894,7.30e-08,7;UBERON:0006222,7.30e-08,7;UBERON:0000955,1.38e-07,68;UBERON:0006238,1.38e-07,68;UBERON:0002791,1.66e-07,32;UBERON:0000125,1.99e-07,9;UBERON:0002308,1.99e-07,9;UBERON:0010371,3.15e-07,104;UBERON:0001893,6.44e-07,34;UBERON:0007023,7.34e-07,114 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,3.20936304141395,3.28402357799783,3.93553906568396,0,0,0,0,0,0,2.71135202031056,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.567208902984407,1.33037638477538,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0.624320153660641,0,0.896692083310806,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.673344455816265,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.286804595389004,0.975789649036763,0.132529768321485,0.580969714347592,0.725627385107593,0.504641701751257,0,0,0,0,0,0,1.18306800039844,0.842923450390509,3.13314338848527,0.661763836394364,1.08939722046203,1.18635309555548,1.61797569792197,1.37355025587742,1.53898862778556,0,0,0,0,1.26755034821831,0,2.36315962672562,3.09024169590255,0.122988438543114,0.343135620597051,0,0,1.00528972411631,0,0,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,1.97065295158377,0.352193736052904,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,1.50677127429638,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0.76228387266739,0,0.773288812777695,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,1.53481913652154,0.522870902049801,0.769350375349168,0,0,0.206082023295445,2.38080608527693,0.907604499126468,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0.0890320356467374,0.330569830721956,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0.962479855263359,1.47024129588619,3.15865397713722,1.73123055571734,2.63224820389132,4.14508309094938,0,0.191505370132367,0.846694330895531,1.62310970137278,2.80797178113459,0.456469358066384,5.79715614360186,2.50634477090067,0.677167111206413,0.1605880751037,0.201799707191048,0,2.06103206853459,2.15068535015921,1.78940886313933,1.83534055883099,0.390776190804081,3.89768643453339,1.23087398947712,0.811367035427949,0.66614393599564,4.22961015263549,0,0.293016358543788,0.970884173996107,3.78907506543426,0,0,0,0,0.994147647766298,1.40669416410513,0,0,1.05562704063997,0,0,1.51159648712566,0.511343412510774,0.738508832766417,0,0.0898683511473268,0,0,0.493217028184668,0,0,0,0.463840490809256,0,0.260427761085233,0.61221999997337,0.724999575434793,0.1137934482855,1.5255219017566,0.236387681767936,1.03423011972439,4.08246458736556,0,1.77148277162768,0.482385754501632,0,0.552896299656123,0,0.87754158861589,0.435753854075961,0,0.307801034015188,0,0,0.269272933229316,0,0,0,0,0,0.31396051279005,0.498635045700469,0.225595660617181,0.19606253431774,0.503464760927528,2.46679852541441,1.74830236878417,0.843992258112108,0,0,3.46221823587346,0,0.0884575645033392,0,0,0.617819694732514,0.730953646538188,0.202203398942031,0.802577647298789,0.234264445725339,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.311064574191741,0,0.330991955875499,0,0,0.569219092059585,0.970722711091971,0.173559738335131,0,0,0.698906672968121,0.687944129886466,3.67674058898524,4.38535902517113,3.61308011034121,0,0.176512253383001,0,0,0,0.379864775735272,1.56441106187842,0.160317640503067,0.213452994739353,0,0.144090417154106,0,0.857974989309823,0.288109595976299,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,1.20084057741958,1.50595916781192,0,0,1.05154941711726,0,0.916641696046735,0,0,0,0,0.134366944973453,0,0,0,0,0,0.295282444544246,4.06431993915765,1.59045937961861,1.63444087333891,0,1.10031549277787,1.24632101408756,0.4499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| |||
|short_description=p@chrX:80370650..80370666,- | |||
}} |
Latest revision as of 09:44, 1 August 2015
Short description: | p@chrX:80370650..80370666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:80370650..80370666, - |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.12e-13 | 56 |
neural rod | 4.12e-13 | 56 |
future spinal cord | 4.12e-13 | 56 |
neural keel | 4.12e-13 | 56 |
regional part of forebrain | 1.69e-11 | 41 |
forebrain | 1.69e-11 | 41 |
anterior neural tube | 1.69e-11 | 41 |
future forebrain | 1.69e-11 | 41 |
regional part of nervous system | 2.38e-11 | 53 |
regional part of brain | 2.38e-11 | 53 |
neurectoderm | 4.97e-11 | 86 |
larynx | 3.62e-10 | 9 |
central nervous system | 7.38e-10 | 81 |
brain grey matter | 1.93e-09 | 34 |
gray matter | 1.93e-09 | 34 |
gland of diencephalon | 2.61e-09 | 4 |
neuroendocrine gland | 2.61e-09 | 4 |
nervous system | 3.24e-09 | 89 |
neural plate | 5.36e-09 | 82 |
presumptive neural plate | 5.36e-09 | 82 |
pre-chordal neural plate | 2.57e-08 | 61 |
diencephalon | 7.30e-08 | 7 |
future diencephalon | 7.30e-08 | 7 |
brain | 1.38e-07 | 68 |
future brain | 1.38e-07 | 68 |
regional part of telencephalon | 1.66e-07 | 32 |
neural nucleus | 1.99e-07 | 9 |
nucleus of brain | 1.99e-07 | 9 |
ecto-epithelium | 3.15e-07 | 104 |
telencephalon | 6.44e-07 | 34 |
adult organism | 7.34e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.98e-19 | 51 |
immune system cancer | 2.98e-19 | 51 |
leukemia | 3.45e-16 | 39 |
cancer | 1.57e-10 | 235 |
disease of cellular proliferation | 4.73e-10 | 239 |
myeloid leukemia | 1.88e-09 | 31 |