FFCP PHASE1:Mm9::chr7:6282837..6282892,-: Difference between revisions
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{{FFCP|EntrezGene=213011|HGNC=|MCL_coexpression_id=1|UniProt=Q3V080,D3YXW6|association_with_transcript=0bp_to_ENSMUST00000062765,ENSMUST00000123868,ENSMUST00000127658,uc009fbd.2_5end|description=CAGE_peak_1_at_Zfp583_5end|id=chr7:6282837..6282892,-|ontology_enrichment_celltype=CL:0000540!2.21e-11!33;CL:0000047!2.21e-11!33;CL:0000031!2.21e-11!33;CL:0000404!2.21e-11!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39;CL:0000117!2.09e-08!23;CL:0000337!2.09e-08!23;CL:0002319!3.99e-07!43;CL:0000221!4.21e-07!44;CL:0000133!4.21e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,1.66e-11,33;CL:0000047,1.66e-11,33;CL:0000031,1.66e-11,33;CL:0000404,1.66e-11,33;CL:0000393,3.47e-09,39;CL:0000211,3.47e-09,39;CL:0000117,1.71e-08,23;CL:0000337,1.71e-08,23;CL:0002319,4.43e-07,43;CL:0000221,4.67e-07,44;CL:0000133,4.67e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.93e-20!73;UBERON:0005743!2.93e-20!73;UBERON:0000073!7.74e-20!75;UBERON:0001016!7.74e-20!75;UBERON:0004121!2.08e-16!102;UBERON:0000924!2.08e-16!102;UBERON:0006601!2.08e-16!102;UBERON:0002346!4.06e-15!71;UBERON:0003075!4.06e-15!71;UBERON:0007284!4.06e-15!71;UBERON:0001049!4.69e-15!52;UBERON:0005068!4.69e-15!52;UBERON:0006241!4.69e-15!52;UBERON:0007135!4.69e-15!52;UBERON:0000955!2.27e-14!50;UBERON:0006238!2.27e-14!50;UBERON:0002616!8.94e-14!49;UBERON:0000033!1.78e-13!63;UBERON:0002020!1.39e-12!34;UBERON:0003056!5.20e-12!49;UBERON:0003080!5.94e-12!40;UBERON:0002780!1.66e-11!39;UBERON:0001890!1.66e-11!39;UBERON:0006240!1.66e-11!39;UBERON:0000468!7.94e-11!333;UBERON:0002791!3.59e-10!29;UBERON:0003528!3.59e-10!29;UBERON:0001893!3.59e-10!29;UBERON:0000922!6.38e-10!328;UBERON:0000153!7.19e-10!94;UBERON:0007811!2.78e-08!86;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0000956!1.56e-07!21;UBERON:0001869!1.56e-07!21;UBERON:0000203!1.56e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-20,73;UBERON:0001016,6.69e-20,75;UBERON:0004121,8.79e-17,95;UBERON:0000924,8.79e-17,95;UBERON:0006601,8.79e-17,95;UBERON:0000073,2.80e-16,54;UBERON:0002346,5.30e-16,64;UBERON:0003075,5.30e-16,64;UBERON:0007284,5.30e-16,64;UBERON:0001049,4.65e-15,52;UBERON:0005068,4.65e-15,52;UBERON:0006241,4.65e-15,52;UBERON:0007135,4.65e-15,52;UBERON:0010314,5.31e-14,92;UBERON:0010371,3.14e-13,73;UBERON:0000955,6.56e-13,47;UBERON:0006238,6.56e-13,47;UBERON:0002020,1.14e-12,34;UBERON:0002616,2.52e-12,46;UBERON:0003056,4.24e-12,49;UBERON:0003080,4.88e-12,40;UBERON:0002780,1.38e-11,39;UBERON:0001890,1.38e-11,39;UBERON:0006240,1.38e-11,39;UBERON:0000922,1.26e-10,320;UBERON:0003528,3.12e-10,29;UBERON:0002791,3.12e-10,29;UBERON:0001893,3.12e-10,29;UBERON:0002021,9.08e-08,10;UBERON:0000411,9.08e-08,10;UBERON:0001950,9.08e-08,10;UBERON:0000956,1.46e-07,21;UBERON:0001869,1.46e-07,21;UBERON:0000203,1.46e-07,21|phase1_expression=2.5623815536767,0,0,0,0,0.33575854382378,0,0.516493293766305,0,0.468129052643987,1.19852577757853,1.19658238493005,1.36960583944965,1.31130603628496,1.33243904726265,1.01237633694913,2.09868563438444,1.89277299214943,2.19383093769182,0.42438965179803,2.46625541438102,0.496454756004426,1.30599894569468,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0.485510353031154,0.881277725829041,0.912392380975631,2.0190142737785,1.56478268869608,0.65407546914134,0.439372365468944,1.36100929351998,1.25987779462826,2.87505128729943,0.503347818173209,0,2.01656279485478,2.82985379639542,6.01720223871389,2.06268836910977,5.46254444320914,6.34789175126439,8.87363964908651,1.0165335962074,0.889294796111139,0.899899717281399,0.988866362566974,2.8419204597844,1.19840044207362,1.15265491596466,5.08079100311541,4.18518408828241,4.83747411108179,7.14127461009509,5.74258206474195,4.65465037016825,3.25874601462004,4.5960939330501,9.91042928994498,6.12899222808901,5.83704826373725,4.87979264601717,5.76372154695181,7.29278718779464,5.02529398202486,4.50210088025344,8.09830713217094,8.54422897873636,7.11858403995515,7.26957838718672,1.51452386666368,4.1564358058732,3.18850937571846,0,0,0,0,0.448026887097336,1.12355536105401,0.511290967734173,0.259786004602869,0.35333957451034,3.38024207464033,0,0,0,0.216491041011214,0.253359865475099,0,0.79928715803342,4.66088190564909,3.85949561568544,3.81667718885499,3.04465478312141,2.30615497256059,2.71300752994721,2.4693628498498,3.26733137457156,1.97755974187499,5.35017620603673,1.76922110389975,2.75003644910596,2.42925670306433,2.90925151881133,0,7.31951992528868,6.49284791121711,1.02182822083437,0.838705871541442,0.599902730993408,0.762421362438388,6.44099749440738,7.77751024791665,5.6544458450789,7.99591872884472,6.13717097592793,5.40248915854856,5.67844420737152,3.25885964321012,1.99051152976149,1.26361379216837,3.15662783829711,5.98554037628437,3.67843367093557,4.32149111532838,5.72678307775717,2.78949646520444,3.20284300712124,3.5606655332697,3.10444044886819,2.37124792226126,8.13156144721623,4.92663147659057,4.60311038097907,7.507275729091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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213011 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V080,D3YXW6 | |||
|association_with_transcript=0bp_to_ENSMUST00000062765,ENSMUST00000123868,ENSMUST00000127658,uc009fbd.2_5end | |||
|cluster_id=chr7:6282837..6282892,- | |||
|description=CAGE_peak_1_at_Zfp583_5end | |||
|id=chr7:6282837..6282892,- | |||
|ontology_enrichment_celltype=CL:0000540!2.21e-11!33;CL:0000047!2.21e-11!33;CL:0000031!2.21e-11!33;CL:0000404!2.21e-11!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39;CL:0000117!2.09e-08!23;CL:0000337!2.09e-08!23;CL:0002319!3.99e-07!43;CL:0000221!4.21e-07!44;CL:0000133!4.21e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.66e-11,33;CL:0000047,1.66e-11,33;CL:0000031,1.66e-11,33;CL:0000404,1.66e-11,33;CL:0000393,3.47e-09,39;CL:0000211,3.47e-09,39;CL:0000117,1.71e-08,23;CL:0000337,1.71e-08,23;CL:0002319,4.43e-07,43;CL:0000221,4.67e-07,44;CL:0000133,4.67e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.93e-20!73;UBERON:0005743!2.93e-20!73;UBERON:0000073!7.74e-20!75;UBERON:0001016!7.74e-20!75;UBERON:0004121!2.08e-16!102;UBERON:0000924!2.08e-16!102;UBERON:0006601!2.08e-16!102;UBERON:0002346!4.06e-15!71;UBERON:0003075!4.06e-15!71;UBERON:0007284!4.06e-15!71;UBERON:0001049!4.69e-15!52;UBERON:0005068!4.69e-15!52;UBERON:0006241!4.69e-15!52;UBERON:0007135!4.69e-15!52;UBERON:0000955!2.27e-14!50;UBERON:0006238!2.27e-14!50;UBERON:0002616!8.94e-14!49;UBERON:0000033!1.78e-13!63;UBERON:0002020!1.39e-12!34;UBERON:0003056!5.20e-12!49;UBERON:0003080!5.94e-12!40;UBERON:0002780!1.66e-11!39;UBERON:0001890!1.66e-11!39;UBERON:0006240!1.66e-11!39;UBERON:0000468!7.94e-11!333;UBERON:0002791!3.59e-10!29;UBERON:0003528!3.59e-10!29;UBERON:0001893!3.59e-10!29;UBERON:0000922!6.38e-10!328;UBERON:0000153!7.19e-10!94;UBERON:0007811!2.78e-08!86;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0000956!1.56e-07!21;UBERON:0001869!1.56e-07!21;UBERON:0000203!1.56e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-20,73;UBERON:0001016,6.69e-20,75;UBERON:0004121,8.79e-17,95;UBERON:0000924,8.79e-17,95;UBERON:0006601,8.79e-17,95;UBERON:0000073,2.80e-16,54;UBERON:0002346,5.30e-16,64;UBERON:0003075,5.30e-16,64;UBERON:0007284,5.30e-16,64;UBERON:0001049,4.65e-15,52;UBERON:0005068,4.65e-15,52;UBERON:0006241,4.65e-15,52;UBERON:0007135,4.65e-15,52;UBERON:0010314,5.31e-14,92;UBERON:0010371,3.14e-13,73;UBERON:0000955,6.56e-13,47;UBERON:0006238,6.56e-13,47;UBERON:0002020,1.14e-12,34;UBERON:0002616,2.52e-12,46;UBERON:0003056,4.24e-12,49;UBERON:0003080,4.88e-12,40;UBERON:0002780,1.38e-11,39;UBERON:0001890,1.38e-11,39;UBERON:0006240,1.38e-11,39;UBERON:0000922,1.26e-10,320;UBERON:0003528,3.12e-10,29;UBERON:0002791,3.12e-10,29;UBERON:0001893,3.12e-10,29;UBERON:0002021,9.08e-08,10;UBERON:0000411,9.08e-08,10;UBERON:0001950,9.08e-08,10;UBERON:0000956,1.46e-07,21;UBERON:0001869,1.46e-07,21;UBERON:0000203,1.46e-07,21 | |||
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| |||
|short_description=p1@Zfp583 | |||
}} |
Latest revision as of 23:40, 26 September 2015
Short description: | p1@Zfp583 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp583_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000062765, ENSMUST00000123868, ENSMUST00000127658, uc009fbd.2_5end |
EntrezGene: | Zfp583 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.66e-11 | 33 |
neuronal stem cell | 1.66e-11 | 33 |
neuroblast | 1.66e-11 | 33 |
electrically signaling cell | 1.66e-11 | 33 |
electrically responsive cell | 3.47e-09 | 39 |
electrically active cell | 3.47e-09 | 39 |
CNS neuron (sensu Vertebrata) | 1.71e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-08 | 23 |
neural cell | 4.43e-07 | 43 |
ectodermal cell | 4.67e-07 | 44 |
neurectodermal cell | 4.67e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.52e-20 | 73 |
nervous system | 6.69e-20 | 75 |
ectoderm-derived structure | 8.79e-17 | 95 |
ectoderm | 8.79e-17 | 95 |
presumptive ectoderm | 8.79e-17 | 95 |
regional part of nervous system | 2.80e-16 | 54 |
neurectoderm | 5.30e-16 | 64 |
neural plate | 5.30e-16 | 64 |
presumptive neural plate | 5.30e-16 | 64 |
neural tube | 4.65e-15 | 52 |
neural rod | 4.65e-15 | 52 |
future spinal cord | 4.65e-15 | 52 |
neural keel | 4.65e-15 | 52 |
structure with developmental contribution from neural crest | 5.31e-14 | 92 |
ecto-epithelium | 3.14e-13 | 73 |
brain | 6.56e-13 | 47 |
future brain | 6.56e-13 | 47 |
gray matter | 1.14e-12 | 34 |
regional part of brain | 2.52e-12 | 46 |
pre-chordal neural plate | 4.24e-12 | 49 |
anterior neural tube | 4.88e-12 | 40 |
regional part of forebrain | 1.38e-11 | 39 |
forebrain | 1.38e-11 | 39 |
future forebrain | 1.38e-11 | 39 |
embryo | 1.26e-10 | 320 |
brain grey matter | 3.12e-10 | 29 |
regional part of telencephalon | 3.12e-10 | 29 |
telencephalon | 3.12e-10 | 29 |
occipital lobe | 9.08e-08 | 10 |
visual cortex | 9.08e-08 | 10 |
neocortex | 9.08e-08 | 10 |
cerebral cortex | 1.46e-07 | 21 |
cerebral hemisphere | 1.46e-07 | 21 |
pallium | 1.46e-07 | 21 |