FFCP PHASE1:Mm9::chrX:34529652..34529669,-: Difference between revisions
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{{FFCP|EntrezGene=56526|HGNC=|UniProt=Q9R1T4|association_with_transcript=-1bp_to_ENSMUST00000053456,ENSMUST00000060474,ENSMUST00000115239_5end|description=CAGE_peak_5_at_Sept6_5end|id=chrX:34529652..34529669,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,5.20e-07,23;CL:0000337,5.20e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.97e-14!71;UBERON:0003075!2.97e-14!71;UBERON:0007284!2.97e-14!71;UBERON:0000033!7.11e-10!63;UBERON:0000153!9.67e-10!94;UBERON:0001049!2.20e-09!52;UBERON:0005068!2.20e-09!52;UBERON:0006241!2.20e-09!52;UBERON:0007135!2.20e-09!52;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0003056!1.58e-08!49;UBERON:0007811!2.97e-08!86;UBERON:0002616!7.43e-08!49;UBERON:0001017!7.51e-08!73;UBERON:0005743!7.51e-08!73;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0000073!1.76e-07!75;UBERON:0001016!1.76e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.89e-20,92;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0010371,5.05e-12,73;UBERON:0000073,2.09e-11,54;UBERON:0001049,5.73e-11,52;UBERON:0005068,5.73e-11,52;UBERON:0006241,5.73e-11,52;UBERON:0007135,5.73e-11,52;UBERON:0001017,6.93e-11,73;UBERON:0001016,2.73e-10,75;UBERON:0004121,5.14e-10,95;UBERON:0000924,5.14e-10,95;UBERON:0006601,5.14e-10,95;UBERON:0002616,2.07e-09,46;UBERON:0000955,4.86e-09,47;UBERON:0006238,4.86e-09,47;UBERON:0003056,7.16e-09,49;UBERON:0002020,2.00e-07,34;UBERON:0003080,3.40e-07,40;UBERON:0002780,9.86e-07,39;UBERON:0001890,9.86e-07,39;UBERON:0006240,9.86e-07,39|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0,1.03298658753261,1.12630977721333,0.70219357896598,0.34243593645101,0.159544317990673,0.856003649656029,0.699363219351979,0.333109761815663,0.202475267389826,0,0.473193248037357,1.50825876966313,0.84877930359606,0.340173160604279,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0.588231488031014,2.04913645487534,1.45653105909346,0.629484089877886,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,1.32521124570968,1.34739879136449,0.670918297127655,0,0,3.44755812830007,1.53606533256243,2.37395317914349,1.18933936683133,1.56274011167028,3.07101298901519,1.68828783009504,2.13917546887534,0.883885756421003,1.56608848879013,1.67759501242771,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0.280888840263504,1.02258193546835,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,1.7813056687779,0.520455980298408,1.21786191324856,0.691846491768175,1.20578112442098,1.17588707135705,1.38233250462643,0,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,4.68449275218475,3.14170060220183,1.02182822083437,0.479260498023681,0,0.381210681219194,1.3481157546434,2.28750301409313,0.628271760564322,2.25971616249959,2.55715457330331,2.90903262383384,1.78465389374533,1.2220723662038,0.248813941220186,0,1.05220927943237,1.69156575851515,1.37941262660084,1.44049703844279,1.20563854268572,0.680364991513279,0.640568601424249,1.03071897015702,0.776110112217047,1.29340795759705,1.89106080167819,2.28736461413134,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,0.414251545071004,1.87620847984877,1.2604344302271,3.55117103377815,2.95146347621106,1.69693824176116,1.39520366850245,1.60964040839772,1.63471479314037,1.48103864922132,1.14917224855367,0.891756905004413,0.438599962275997,0.658650345873152,0.536825675041487,1.05144974282064,0.92614151141356,0.330418782983798,0.528901133327089,0.639864751605702,0.232236671860439,0.515469845288373,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,1.16978452271472,0,0.432276099749388,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,0.203651327845314,1.16371492300575,0.561086559122548,0.442655759869801,0.147610147979602,0.470996183524124,0.246794327843601,0,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,2.08440552947533,1.46668478797823,0.339490171550376,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.945810864637146,0.221464689648775,0.956728611944923,0,0.345369963731791,0.289298117163023,0,0,0,0.551873492609465,2.88991061978026,2.69586879162067,0.819674726883377,0.252470927204373,1.26203287766503,0.780877488593277,1.50796378412959,0,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0.283880170416537,1.6025904330053,0.81443479676788,0.82485061486267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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56526 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9R1T4 | |||
|association_with_transcript=-1bp_to_ENSMUST00000053456,ENSMUST00000060474,ENSMUST00000115239_5end | |||
|cluster_id=chrX:34529652..34529669,- | |||
|description=CAGE_peak_5_at_Sept6_5end | |||
|id=chrX:34529652..34529669,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.20e-07,23;CL:0000337,5.20e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.97e-14!71;UBERON:0003075!2.97e-14!71;UBERON:0007284!2.97e-14!71;UBERON:0000033!7.11e-10!63;UBERON:0000153!9.67e-10!94;UBERON:0001049!2.20e-09!52;UBERON:0005068!2.20e-09!52;UBERON:0006241!2.20e-09!52;UBERON:0007135!2.20e-09!52;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0003056!1.58e-08!49;UBERON:0007811!2.97e-08!86;UBERON:0002616!7.43e-08!49;UBERON:0001017!7.51e-08!73;UBERON:0005743!7.51e-08!73;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0000073!1.76e-07!75;UBERON:0001016!1.76e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.89e-20,92;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0010371,5.05e-12,73;UBERON:0000073,2.09e-11,54;UBERON:0001049,5.73e-11,52;UBERON:0005068,5.73e-11,52;UBERON:0006241,5.73e-11,52;UBERON:0007135,5.73e-11,52;UBERON:0001017,6.93e-11,73;UBERON:0001016,2.73e-10,75;UBERON:0004121,5.14e-10,95;UBERON:0000924,5.14e-10,95;UBERON:0006601,5.14e-10,95;UBERON:0002616,2.07e-09,46;UBERON:0000955,4.86e-09,47;UBERON:0006238,4.86e-09,47;UBERON:0003056,7.16e-09,49;UBERON:0002020,2.00e-07,34;UBERON:0003080,3.40e-07,40;UBERON:0002780,9.86e-07,39;UBERON:0001890,9.86e-07,39;UBERON:0006240,9.86e-07,39 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0,1.03298658753261,1.12630977721333,0.70219357896598,0.34243593645101,0.159544317990673,0.856003649656029,0.699363219351979,0.333109761815663,0.202475267389826,0,0.473193248037357,1.50825876966313,0.84877930359606,0.340173160604279,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0.588231488031014,2.04913645487534,1.45653105909346,0.629484089877886,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,0.856952953211411,1.32521124570968,1.34739879136449,0.670918297127655,0,0,3.44755812830007,1.53606533256243,2.37395317914349,1.18933936683133,1.56274011167028,3.07101298901519,1.68828783009504,2.13917546887534,0.883885756421003,1.56608848879013,1.67759501242771,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0.280888840263504,1.02258193546835,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,1.7813056687779,0.520455980298408,1.21786191324856,0.691846491768175,1.20578112442098,1.17588707135705,1.38233250462643,0,0.289198713839823,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,4.68449275218475,3.14170060220183,1.02182822083437,0.479260498023681,0,0.381210681219194,1.3481157546434,2.28750301409313,0.628271760564322,2.25971616249959,2.55715457330331,2.90903262383384,1.78465389374533,1.2220723662038,0.248813941220186,0,1.05220927943237,1.69156575851515,1.37941262660084,1.44049703844279,1.20563854268572,0.680364991513279,0.640568601424249,1.03071897015702,0.776110112217047,1.29340795759705,1.89106080167819,2.28736461413134,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0.796137067273973,0,0.257347907114715,0.284163499395593,0.414251545071004,1.87620847984877,1.2604344302271,3.55117103377815,2.95146347621106,1.69693824176116,1.39520366850245,1.60964040839772,1.63471479314037,1.48103864922132,1.14917224855367,0.891756905004413,0.438599962275997,0.658650345873152,0.536825675041487,1.05144974282064,0.92614151141356,0.330418782983798,0.528901133327089,0.639864751605702,0.232236671860439,0.515469845288373,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.397912944082302,1.16978452271472,0,0.432276099749388,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,0.203651327845314,1.16371492300575,0.561086559122548,0.442655759869801,0.147610147979602,0.470996183524124,0.246794327843601,0,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,2.08440552947533,1.46668478797823,0.339490171550376,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0.945810864637146,0.221464689648775,0.956728611944923,0,0.345369963731791,0.289298117163023,0,0,0,0.551873492609465,2.88991061978026,2.69586879162067,0.819674726883377,0.252470927204373,1.26203287766503,0.780877488593277,1.50796378412959,0,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0.283880170416537,1.6025904330053,0.81443479676788,0.824850614862677,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0.948110273807448,0,0,0.680879211507576,1.44048875225048,0.258717367565509,0.428674070063185,0.709360934569094,1.42695054081656,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0,0.328281799490123,1.1659233465194,1.48340241608408,0,1.23832120777933,0.185194527369712,0.565105371014073,0.546776910884101,0.457556346413045,0.679913719975421,0.559805809294632,0.690999869022119,0.954670618015114,0.949007980743406,0.813277868507395,0.108005340821801,0.418176592028937,0.436725127492355,0.539457385539283,0.826534557253359,0,0.518459893167171,0,0.56369293868419,0.299033092087958,0.827292452285488,0.388902376688095,1.29159823477731,0.675824501963113,0.234714477291508,1.0416350787516,2.83120229949419,0.724752362478018,1.72818003754719,0.632022241256357,0.405450430580328,0.616265742988964,0.51968329191118,0.358053391334963,0.39736270956253,0.721172697119813,0.738447635872886,0.403865799792591,0.914481679859998,0.504130925684203,0.584747284438515,0.577271049841977,1.05189211963412,0.906921534460845,0,0,0.167884616364078,0.19318959403219,0.187682475451182,0.915758121336325,0,0,3.3885110557024,0.920650473014354,1.14579102687879,1.71853182343688,2.05524755931193,0.755393897389701,0,2.70192721934532,1.35942722695261,1.03552062350364,1.97195960409936,1.99512436700516,0.341467211508268,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.824140228955577,0.64183841918363,0.758091635291392,0,0.754505365544305,0.0936415074698824,0.512201219238954,0.287177344778066,0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| |||
|short_description=p5@Sept6 | |||
}} |
Latest revision as of 20:03, 1 October 2015
Short description: | p5@Sept6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sept6_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENSMUST00000053456, ENSMUST00000060474, ENSMUST00000115239_5end |
EntrezGene: | Sept6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.20e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.20e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.89e-20 | 92 |
neurectoderm | 1.56e-13 | 64 |
neural plate | 1.56e-13 | 64 |
presumptive neural plate | 1.56e-13 | 64 |
ecto-epithelium | 5.05e-12 | 73 |
regional part of nervous system | 2.09e-11 | 54 |
neural tube | 5.73e-11 | 52 |
neural rod | 5.73e-11 | 52 |
future spinal cord | 5.73e-11 | 52 |
neural keel | 5.73e-11 | 52 |
central nervous system | 6.93e-11 | 73 |
nervous system | 2.73e-10 | 75 |
ectoderm-derived structure | 5.14e-10 | 95 |
ectoderm | 5.14e-10 | 95 |
presumptive ectoderm | 5.14e-10 | 95 |
regional part of brain | 2.07e-09 | 46 |
brain | 4.86e-09 | 47 |
future brain | 4.86e-09 | 47 |
pre-chordal neural plate | 7.16e-09 | 49 |
gray matter | 2.00e-07 | 34 |
anterior neural tube | 3.40e-07 | 40 |
regional part of forebrain | 9.86e-07 | 39 |
forebrain | 9.86e-07 | 39 |
future forebrain | 9.86e-07 | 39 |