FFCP PHASE1:Mm9::chr16:32877723..32877760,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:32877723..32877760,-
|short_description=p4@1700021K19Rik
|description=CAGE_peak_4_at_1700021K19Rik_5end
|association_with_transcript=91bp_to_ENSMUST000001...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100502698 | |EntrezGene=100502698 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z7B1,Q80U62 | |UniProt=D3Z7B1,Q80U62 | ||
|association_with_transcript=91bp_to_ENSMUST00000119810,ENSMUST00000171595,uc007yzn.1_5end | |||
|cluster_id=chr16:32877723..32877760,- | |||
|description=CAGE_peak_4_at_1700021K19Rik_5end | |||
|id=chr16:32877723..32877760,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.03e-13,73;UBERON:0000073,3.95e-13,54;UBERON:0004121,4.11e-13,95;UBERON:0000924,4.11e-13,95;UBERON:0006601,4.11e-13,95;UBERON:0002346,5.94e-13,64;UBERON:0003075,5.94e-13,64;UBERON:0007284,5.94e-13,64;UBERON:0001016,1.00e-12,75;UBERON:0001049,4.66e-12,52;UBERON:0005068,4.66e-12,52;UBERON:0006241,4.66e-12,52;UBERON:0007135,4.66e-12,52;UBERON:0010314,9.09e-12,92;UBERON:0010371,1.48e-11,73;UBERON:0000025,1.93e-11,114;UBERON:0004111,3.85e-11,122;UBERON:0000955,1.01e-10,47;UBERON:0006238,1.01e-10,47;UBERON:0002616,3.85e-10,46;UBERON:0002020,8.07e-10,34;UBERON:0003056,1.24e-08,49;UBERON:0003528,1.76e-08,29;UBERON:0002791,1.76e-08,29;UBERON:0001893,1.76e-08,29;UBERON:0003080,4.23e-08,40;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0000479,9.18e-07,349 | |||
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| ||
|short_description=p4@1700021K19Rik | |||
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Latest revision as of 21:51, 1 October 2015
Short description: | p4@1700021K19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_1700021K19Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENSMUST00000119810, ENSMUST00000171595, uc007yzn.1_5end |
EntrezGene: | 1700021K19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.03e-13 | 73 |
regional part of nervous system | 3.95e-13 | 54 |
ectoderm-derived structure | 4.11e-13 | 95 |
ectoderm | 4.11e-13 | 95 |
presumptive ectoderm | 4.11e-13 | 95 |
neurectoderm | 5.94e-13 | 64 |
neural plate | 5.94e-13 | 64 |
presumptive neural plate | 5.94e-13 | 64 |
nervous system | 1.00e-12 | 75 |
neural tube | 4.66e-12 | 52 |
neural rod | 4.66e-12 | 52 |
future spinal cord | 4.66e-12 | 52 |
neural keel | 4.66e-12 | 52 |
structure with developmental contribution from neural crest | 9.09e-12 | 92 |
ecto-epithelium | 1.48e-11 | 73 |
tube | 1.93e-11 | 114 |
anatomical conduit | 3.85e-11 | 122 |
brain | 1.01e-10 | 47 |
future brain | 1.01e-10 | 47 |
regional part of brain | 3.85e-10 | 46 |
gray matter | 8.07e-10 | 34 |
pre-chordal neural plate | 1.24e-08 | 49 |
brain grey matter | 1.76e-08 | 29 |
regional part of telencephalon | 1.76e-08 | 29 |
telencephalon | 1.76e-08 | 29 |
anterior neural tube | 4.23e-08 | 40 |
regional part of forebrain | 1.44e-07 | 39 |
forebrain | 1.44e-07 | 39 |
future forebrain | 1.44e-07 | 39 |
tissue | 9.18e-07 | 349 |