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FFCP PHASE1:Mm9::chr18:35931025..35931141,+: Difference between revisions

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(Created page with "{{FFCP |id=chr18:35931025..35931141,+ |short_description=p1@Ube2d2 |description=CAGE_peak_1_at_Ube2d2_5end |association_with_transcript=-71bp_to_ENSMUST00000170693,NM_0199...")
 
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{{FFCP
{{FFCP
|id=chr18:35931025..35931141,+
|DHSsupport=NA
|short_description=p1@Ube2d2
|DPIdataset=NA
|description=CAGE_peak_1_at_Ube2d2_5end
|association_with_transcript=-71bp_to_ENSMUST00000170693,NM_019912,uc012bbj.1_5end
|EntrezGene=56550
|EntrezGene=56550
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=P62838,Q3UT95,Q9D7F5
|UniProt=P62838,Q3UT95,Q9D7F5
|association_with_transcript=-71bp_to_ENSMUST00000170693,NM_019912,uc012bbj.1_5end
|cluster_id=chr18:35931025..35931141,+
|description=CAGE_peak_1_at_Ube2d2_5end
|id=chr18:35931025..35931141,+
|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000221!1.90e-12!44;CL:0000133!1.90e-12!44;CL:0002319!3.72e-12!43;CL:0000540!7.26e-12!33;CL:0000047!7.26e-12!33;CL:0000031!7.26e-12!33;CL:0000404!7.26e-12!33;CL:0000055!9.96e-08!50;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-14,23;CL:0000337,1.25e-14,23;CL:0000221,1.90e-12,44;CL:0000133,1.90e-12,44;CL:0002319,3.72e-12,43;CL:0000540,7.26e-12,33;CL:0000047,7.26e-12,33;CL:0000031,7.26e-12,33;CL:0000404,7.26e-12,33;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.10e-22!73;UBERON:0005743!1.10e-22!73;UBERON:0000073!2.65e-22!75;UBERON:0001016!2.65e-22!75;UBERON:0004121!5.09e-22!102;UBERON:0000924!5.09e-22!102;UBERON:0006601!5.09e-22!102;UBERON:0000033!2.97e-21!63;UBERON:0002346!5.28e-21!71;UBERON:0003075!5.28e-21!71;UBERON:0007284!5.28e-21!71;UBERON:0001049!4.61e-19!52;UBERON:0005068!4.61e-19!52;UBERON:0006241!4.61e-19!52;UBERON:0007135!4.61e-19!52;UBERON:0000955!8.87e-18!50;UBERON:0006238!8.87e-18!50;UBERON:0002616!2.17e-17!49;UBERON:0003056!3.17e-17!49;UBERON:0000153!3.17e-16!94;UBERON:0007811!1.01e-14!86;UBERON:0003080!7.20e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0002020!2.08e-12!34;UBERON:0002791!6.98e-10!29;UBERON:0003528!6.98e-10!29;UBERON:0001893!6.98e-10!29
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.65e-23,95;UBERON:0000924,8.65e-23,95;UBERON:0006601,8.65e-23,95;UBERON:0001017,1.10e-22,73;UBERON:0002346,2.07e-22,64;UBERON:0003075,2.07e-22,64;UBERON:0007284,2.07e-22,64;UBERON:0001016,2.65e-22,75;UBERON:0000073,3.55e-20,54;UBERON:0010371,4.37e-20,73;UBERON:0001049,4.61e-19,52;UBERON:0005068,4.61e-19,52;UBERON:0006241,4.61e-19,52;UBERON:0007135,4.61e-19,52;UBERON:0003056,3.17e-17,49;UBERON:0010314,5.69e-17,92;UBERON:0000955,4.57e-16,47;UBERON:0006238,4.57e-16,47;UBERON:0002616,1.10e-15,46;UBERON:0003080,7.20e-14,40;UBERON:0002780,2.76e-13,39;UBERON:0001890,2.76e-13,39;UBERON:0006240,2.76e-13,39;UBERON:0002020,2.08e-12,34;UBERON:0003528,6.98e-10,29;UBERON:0002791,6.98e-10,29;UBERON:0001893,6.98e-10,29
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|phase1_expression=13.6126520039075,2.09385244583617,2.72999543633722,3.32710632437513,3.00537437967808,2.51818907867835,1.40167584357315,6.84353614240354,11.6854639385883,8.42632294759177,4.10923123741212,2.55270908785077,8.56003649656029,6.29426897416781,3.66420737997229,4.04950534779652,3.49780939064073,7.5710919685977,7.81552271552711,7.21462408056651,42.3515584952328,5.06383851124515,2.61199789138935,1.43993180514066,2.98232065387321,1.14846392823004,1.29228598847722,3.23206849028834,1.90023419456374,1.76421090831952,2.88249663851896,2.54012269383853,3.69038872550742,0,2.02196133825892,2.1610503896604,2.6542016314108,11.7188856606334,7.0320181007142,8.89990364755457,8.2352408324342,14.3439551841274,7.2826552954673,3.02152363141385,4.66333883609767,3.30384153891027,17.2126095756569,11.1192829754028,10.3252505885202,8.1660557611199,11.0589273084036,17.2503077237966,9.73139115134871,10.1550699881588,10.7550015725588,6.94600477297057,5.44413535883638,3.6097046459421,48.7582670671631,39.1453324661304,44.3681982454325,6.43804610931351,9.78224275722253,11.2487464660175,6.92206453796882,9.2362414942993,12.583204641773,10.7581125490035,33.3880551633298,30.106324247967,26.2906201689228,18.852964970651,20.0990372265968,29.5202826108039,26.357504530015,23.8996884518605,20.9220173898839,24.3882815742709,24.2698322544865,45.8964281301075,39.522662036241,35.4221091978597,22.6138229191119,19.6966913511088,21.0861581931998,20.3293723976831,20.9286370774681,36.7206908275842,9.69295274664756,8.91744409260069,4.63783181922684,4.30211938490693,4.0798280022465,2.15881276655127,2.59910566979068,4.48026887097336,7.44355426698285,6.30592193538814,7.53379413348319,7.42013106471715,13.8026551381147,3.84979432242953,2.54805239706646,0,2.59789249213457,2.02687892380079,2.02209778005913,7.65031994117702,8.2860122767095,10.984718290797,10.235634279202,6.08930956624282,6.6878494204257,8.44046787094686,10.4653949350777,12.0639927676488,6.17987419335935,8.09756398751505,5.30766331169925,13.2648816956876,11.2629174414801,7.27312879702833,3.72783522436244,11.4184510834503,11.3101221679266,3.32094171771169,8.02761334189666,7.19883277192089,9.14905634926066,26.9623150928681,16.0125210986519,27.5183031127173,16.5133104182663,10.4843337505436,22.648896856992,17.3598151482501,17.0071737630028,7.0911973247753,5.05445516867349,11.3638602178696,10.9301172088671,19.0818746679783,21.0672691872259,19.8930359543144,20.751132241155,19.2170580427275,19.9584673312222,12.4177617954728,19.6166873568886,18.7215019366141,14.4279921814438,13.8093311429372,7.50727572909114,13.2335823278423,10.906453229621,14.52950147775,7.72434506044558,7.20574139921202,6.81992398549422,11.1847917169171,11.4917769390737,9.00310307305074,10.180023630164,9.83821158737019,8.17615698303105,9.06882384526591,8.31647544338819,11.0927075248811,9.87359099480883,8.37254066803386,8.51222500231485,7.89479932096795,7.46470391989572,5.77087600669599,11.565947171027,35.5020912708531,2.31293148088659,4.23120906661671,11.3042772783674,8.82499353069666,8.24751752461397,6.25218926332362,6.0042071838115,6.84812254005213,3.32170343081158,6.58795818896044,6.03204501120647,5.37182474511107,5.26403035221624,6.29173586057955,5.18731319699266,3.78368419183298,17.0701110857774,11.3106027483632,6.76246414038483,10.1825663922657,9.30971938404604,11.5724102819026,8.60016904889899,5.01874503130647,3.61097074035162,3.08492909804501,2.07516838961004,5.5058884886311,6.6830058338489,3.59779379815766,4.66578279193557,3.13530307678142,3.05551022137704,3.16465751195892,6.16113861745134,2.47105271869273,31.629005436018,4.83783231969054,1.87222603868736,4.2938409251009,2.87035861635059,1.92977408545347,9.23765950833023,14.5908387063273,10.7556884451737,8.82674446030978,11.4998221661366,9.71536293162531,9.99783291721258,11.7080188714679,12.9260818167077,12.6234873099802,11.6401981119966,6.22680595919804,8.97961905702657,5.93061140184197,4.52373851817817,7.07077388964322,8.85175691434265,6.89841865761831,22.7981837782665,24.3800308111783,6.06559297893699,7.32165688892682,11.3582958989852,9.76096860741596,9.47862950024315,8.84184552424442,8.68914828921337,15.8522857241746,6.47697122679831,8.18316402151673,8.30104333687699,15.4234231882467,11.7810270722863,15.4917075190512,18.0804524882469,11.5479086080775,5.30980553359851,10.1967867185092,6.04647113929502,5.28094223316515,9.15435867930396,5.22639751504677,9.8202751403924,14.5413491791002,8.19943970284859,6.0046984007805,5.27093042874994,5.15677716240934,13.6175842301515,15.4852540866927,14.4881725836685,15.6466035573062,13.3005175231705,12.4858172321449,12.5057255657612,19.1812917942198,7.04015124191131,7.20229040936989,2.8668691747145,7.25499512942512,10.333723308538,7.2375509913787,7.28171298419132,6.56563598980245,2.33184669303881,33.9328302679233,4.95525554313773,11.9704383418669,7.59297562215818,3.95573759709851,5.60446333656203,5.26189798375002,10.1987057996313,8.25713568709582,8.56839837587428,7.63736494412091,13.2861117304077,9.96265388921559,9.28845931067491,7.52717865652087,6.55087691238533,8.90104686139817,7.60411792673091,4.18809507174447,4.79575401179634,10.5627683224777,303.266801012094,11.0642244072544,13.0712207461107,12.8337784307071,13.6909412886395,10.9821481569006,15.256441023948,15.754730566118,14.4705895307481,55.5643477899814,111.755642428052,9.48033361884535,6.48720688928525,10.681939545142,6.88580361782314,13.0689487837261,12.715606706001,8.05309511783791,9.7475087935221,9.99567854486662,9.67826444518498,10.2842708839577,9.64833019323549,9.62118416403295,9.70078288107022,6.34845074122592,6.65957860122194,4.66512054369274,5.54019234001459,8.88672132548076,5.06742683718191,9.34073283763052,6.43105137237198,5.517293144389,11.2950368523413,14.2700823317225,17.7597609166213,18.2164373284309,10.2762377965596,10.5755145634558,6.07520250208625,11.7083512838297,10.4222754066367,11.9084871702919,23.6635152491923,21.5473431636557,16.0489589408886,10.2104821168684,16.5594398476106,12.501358574601,10.8900896622791,9.47761263298913,10.2694147069381,8.84440241173291,7.35089969681695,12.0720858487089,9.55143376192801,10.756225604018,10.5681262878328,8.09699275181225,11.9360855723201,14.2752823143142,7.82963211526283,9.27353196846703,10.6289468239479,5.32427418478012,7.39152188836695,6.83128158171944,9.69326618277905,9.56145069175945,11.5244622909847,6.05060336307039,9.77789619690205,10.661703161497,11.3889617399207,11.0325020260631,9.00308294973317,10.5357052006457,10.4169569929816,14.4890135204009,11.462648813825,11.3881658645598,14.5379132372321,14.3384422427685,14.1439379728457
|short_description=p1@Ube2d2
}}
}}

Latest revision as of 05:00, 27 September 2015

Short description:p1@Ube2d2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ube2d2_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -71bp_to_ENSMUST00000170693, NM_019912, uc012bbj.1_5end
EntrezGene:Ube2d2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ube2d2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.73
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C348.76
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C744.37
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D533.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.33
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.72
Mouse Schwann, donor1.CNhs12507.11728-123D99.69
Mouse Schwann, donor2.CNhs12573.11746-123F98.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.65
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C110.47
adrenal gland, neonate N25.CNhs11223.1377-27I312.06
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F513.26
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I211.31
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.15
corpora quadrigemina, adult.CNhs10501.16-22A426.96
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F127.52
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F222.65
diencephalon, neonate N30.CNhs11201.1388-42B217.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C610.93
eyeball, embryo E14.CNhs10521.399-16E219.08
eyeball, embryo E15.CNhs10593.426-16C921.07
eyeball, embryo E17.CNhs11023.1261-18D419.89
eyeball, neonate N00.CNhs11207.633-15C620.75
eyeball, neonate N01.CNhs11140.1532-43E719.22
eyeball, neonate N02.CNhs11205.1551-44G819.96
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E219.62
forelimb, embryo E12.CNhs10600.359-14H218.72
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E911.18
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E311.09
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G18.51
heart, neonate N20.CNhs11127.821-26I67.89
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G135.50
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I511.30
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D88.25
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I917.07
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G711.57
kidney, neonate N10.CNhs11206.758-6D58.60
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G214.59
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C611.71
lung, neonate N06.CNhs11212.683-20E512.93
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C222.80
medulla oblongata, neonate N30.CNhs11200.1396-42A324.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I418.08
oviduct, adult pregnant day01.CNhs10500.988-6G611.55
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C714.49
pituitary gland, embryo E14.CNhs11037.398-44A515.65
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F612.49
pituitary gland, embryo E17.CNhs11039.1265-44F512.51
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H37.24
skin, neonate N06.CNhs11097.693-20I57.28
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C933.93
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G35.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.57
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E313.29
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D49.29
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B88.90
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G5303.27
testis, embryo E13.CNhs11031.389-23F511.06
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G512.83
testis, embryo E17.CNhs11029.486-18I513.69
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I415.75
testis, neonate N10.CNhs11204.763-44D914.47
testis, neonate N20.CNhs11110.839-18H355.56
testis, neonate N30.CNhs11130.1391-42E2111.76
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C56.89
thymus, embryo E17.CNhs10581.478-18C113.07
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F88.05
thymus, neonate N03.CNhs11137.2104-43C79.75
thymus, neonate N06.CNhs11197.681-26C410.00
thymus, neonate N07.CNhs11211.713-19D39.68
thymus, neonate N10.CNhs11194.748-24E410.28
thymus, neonate N20.CNhs11186.820-7A29.65
thymus, neonate N25.CNhs11125.1362-25G79.62
thymus, neonate N30.CNhs11132.1393-42G29.70
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I823.66
whole body, embryo E12.CNhs10587.857-27C921.55
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I514.49
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C614.54
whole body, neonate N06.CNhs10515.692-21D114.34
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.25e-1423
neuroblast (sensu Vertebrata)1.25e-1423
ectodermal cell1.90e-1244
neurectodermal cell1.90e-1244
neural cell3.72e-1243
neuron7.26e-1233
neuronal stem cell7.26e-1233
neuroblast7.26e-1233
electrically signaling cell7.26e-1233
electrically responsive cell1.61e-0739
electrically active cell1.61e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.65e-2395
ectoderm8.65e-2395
presumptive ectoderm8.65e-2395
central nervous system1.10e-2273
neurectoderm2.07e-2264
neural plate2.07e-2264
presumptive neural plate2.07e-2264
nervous system2.65e-2275
regional part of nervous system3.55e-2054
ecto-epithelium4.37e-2073
neural tube4.61e-1952
neural rod4.61e-1952
future spinal cord4.61e-1952
neural keel4.61e-1952
pre-chordal neural plate3.17e-1749
structure with developmental contribution from neural crest5.69e-1792
brain4.57e-1647
future brain4.57e-1647
regional part of brain1.10e-1546
anterior neural tube7.20e-1440
regional part of forebrain2.76e-1339
forebrain2.76e-1339
future forebrain2.76e-1339
gray matter2.08e-1234
brain grey matter6.98e-1029
regional part of telencephalon6.98e-1029
telencephalon6.98e-1029
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