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FFCP PHASE1:Mm9::chr18:46358492..46358517,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:46358492..46358517,-
|DHSsupport=NA
|short_description=p2@Trim36
|DPIdataset=NA
|description=CAGE_peak_2_at_Trim36_5end
|association_with_transcript=-20bp_to_ENSMUST00000167364,NM_001170855,uc012bcp.1_5end
|EntrezGene=28105
|EntrezGene=28105
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=E9Q3A0,Q80WG7
|UniProt=E9Q3A0,Q80WG7
|association_with_transcript=-20bp_to_ENSMUST00000167364,NM_001170855,uc012bcp.1_5end
|cluster_id=chr18:46358492..46358517,-
|description=CAGE_peak_2_at_Trim36_5end
|id=chr18:46358492..46358517,-
|ontology_enrichment_celltype=CL:0000540!9.11e-14!33;CL:0000047!9.11e-14!33;CL:0000031!9.11e-14!33;CL:0000404!9.11e-14!33;CL:0000117!2.70e-13!23;CL:0000337!2.70e-13!23;CL:0000393!1.08e-09!39;CL:0000211!1.08e-09!39;CL:0000221!3.19e-09!44;CL:0000133!3.19e-09!44;CL:0002319!5.89e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-32,23;CL:0000337,1.11e-32,23;CL:0000540,8.00e-24,33;CL:0000047,8.00e-24,33;CL:0000031,8.00e-24,33;CL:0000404,8.00e-24,33;CL:0000393,2.11e-19,39;CL:0000211,2.11e-19,39;CL:0002319,3.84e-17,43;CL:0000221,1.21e-16,44;CL:0000133,1.21e-16,44;CL:0002321,7.48e-11,70;CL:0002612,3.28e-08,3;CL:0002613,7.75e-08,3;CL:0002608,2.44e-07,3;CL:0002610,9.34e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.14e-10!102;UBERON:0000924!6.14e-10!102;UBERON:0006601!6.14e-10!102;UBERON:0000073!8.14e-10!75;UBERON:0001016!8.14e-10!75;UBERON:0001017!1.52e-09!73;UBERON:0005743!1.52e-09!73;UBERON:0002346!3.35e-09!71;UBERON:0003075!3.35e-09!71;UBERON:0007284!3.35e-09!71;UBERON:0002020!3.56e-09!34;UBERON:0000033!2.92e-08!63;UBERON:0001049!1.68e-07!52;UBERON:0005068!1.68e-07!52;UBERON:0006241!1.68e-07!52;UBERON:0007135!1.68e-07!52;UBERON:0003056!7.86e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002240,8.32e-15,6;UBERON:0005174,8.32e-15,6;UBERON:0001137,8.32e-15,6;UBERON:0001017,7.54e-13,73;UBERON:0001948,9.34e-13,5;UBERON:0002315,9.34e-13,5;UBERON:0004121,1.30e-12,95;UBERON:0000924,1.30e-12,95;UBERON:0006601,1.30e-12,95;UBERON:0000073,1.55e-12,54;UBERON:0001016,2.35e-12,75;UBERON:0002346,2.43e-12,64;UBERON:0003075,2.43e-12,64;UBERON:0007284,2.43e-12,64;UBERON:0002020,2.57e-12,34;UBERON:0003076,4.70e-12,12;UBERON:0003057,4.70e-12,12;UBERON:0001049,1.43e-10,52;UBERON:0005068,1.43e-10,52;UBERON:0006241,1.43e-10,52;UBERON:0007135,1.43e-10,52;UBERON:0010371,3.49e-10,73;UBERON:0002257,3.28e-08,3;UBERON:0002420,3.57e-07,8;UBERON:0007245,3.57e-07,8;UBERON:0010009,3.57e-07,8;UBERON:0010011,3.57e-07,8;UBERON:0000454,3.57e-07,8;UBERON:0010314,4.77e-07,92;UBERON:0004684,9.34e-07,3;UBERON:0002275,9.34e-07,3
|phase1_expression=0.640595388419176,0,1.36499771816861,0,1.00179145989269,0.503637815735669,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,89.3804979487743,0.198581902401771,0,0.47997726838022,0,0.57423196411502,0.430761996159075,0,0,0.504060259519861,0,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0,2.63011399117477,3.1739458756322,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.829516898467821,1.4850653216486,0.841299845405528,6.56997264128748,5.07997644188711,1.34739879136449,1.53352753629178,2.75765635983006,1.10115880999389,1.14918604276669,1.38245879930619,2.76961204233407,1.9212405156506,3.12548022334056,1.95428099300967,0,1.68078072554491,3.83017161115768,4.9830088279686,2.79599168737951,0.37863096666592,0.377857800533928,0.289864488701678,0,0,0,0,0,9.55022056895913,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,12.5602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0.889491589511453,0.149790639404823,0,0.502617408451458,0.869121600961382,0.255715457330331,0.62336413367868,0.324482526135515,0.203678727700633,0.622034853050465,2.27450482590307,1.05220927943237,0.130120442962704,1.14951052216736,1.44049703844279,0.90422890701429,0.816437989815934,0.2562274405697,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0,0,0.134206418760372,0.630869845692382,1.23485534855141,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.316182685621286,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.0871576698413,2.34423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.690999869022119,0,0.158167996790568,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0,0.648074866458964,0.621339313086926,679.249991114449,0.149516546043979,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.13020438484395,0.314578033277133,8.93861247056222,233.592335075129,0.316011120628178,0,0.205421914329655,0.389762468933385,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0,0,0,0,0.269141569828427,0.503653849092235,0.386379188064381,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.729320151204882,0.419226325255965,0.183843508450014,0,0.412070114477788,0,1.01078884705519,0.50695859978048,0.377252682772152,0.280924522409647,0.704276676453562,0.631790158511746,0,1.0429589335037,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.282328141245992,0.676916863133412,0.73171189149109,0,0,0,0.355905054372522,0.591026894253381,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=0.640595388419176,0,1.36499771816861,0,1.00179145989269,0.503637815735669,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.473193248037357,0.274228867211478,0.42438965179803,89.3804979487743,0.198581902401771,0,0.47997726838022,0,0.57423196411502,0.430761996159075,0,0,0.504060259519861,0,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0,2.63011399117477,3.1739458756322,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.829516898467821,1.4850653216486,0.841299845405528,6.56997264128748,5.07997644188711,1.34739879136449,1.53352753629178,2.75765635983006,1.10115880999389,1.14918604276669,1.38245879930619,2.76961204233407,1.9212405156506,3.12548022334056,1.95428099300967,0,1.68078072554491,3.83017161115768,4.9830088279686,2.79599168737951,0.37863096666592,0.377857800533928,0.289864488701678,0,0,0,0,0,9.55022056895913,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,12.5602267690966,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0.585561594023094,0,0.510914110417183,0.11981512450592,0.599902730993408,0.889491589511453,0.149790639404823,0,0.502617408451458,0.869121600961382,0.255715457330331,0.62336413367868,0.324482526135515,0.203678727700633,0.622034853050465,2.27450482590307,1.05220927943237,0.130120442962704,1.14951052216736,1.44049703844279,0.90422890701429,0.816437989815934,0.2562274405697,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0,0,0.134206418760372,0.630869845692382,1.23485534855141,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.316182685621286,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.0871576698413,2.34423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,2.59595422814714,0,0,0,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.690999869022119,0,0.158167996790568,0.609958401380546,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0,0.648074866458964,0.621339313086926,679.249991114449,0.149516546043979,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.13020438484395,0.314578033277133,8.93861247056222,233.592335075129,0.316011120628178,0,0.205421914329655,0.389762468933385,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0,0,0,0,0.269141569828427,0.503653849092235,0.386379188064381,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.729320151204882,0.419226325255965,0.183843508450014,0,0.412070114477788,0,1.01078884705519,0.50695859978048,0.377252682772152,0.280924522409647,0.704276676453562,0.631790158511746,0,1.0429589335037,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.282328141245992,0.676916863133412,0.73171189149109,0,0,0,0.355905054372522,0.591026894253381,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p2@Trim36
}}
}}

Latest revision as of 07:40, 27 September 2015

Short description:p2@Trim36
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trim36_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -20bp_to_ENSMUST00000167364, NM_001170855, uc012bcp.1_5end
EntrezGene:Trim36
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trim36

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A389.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.56
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G5679.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E2233.59
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
spinal cord8.32e-156
dorsal region element8.32e-156
dorsum8.32e-156
central nervous system7.54e-1373
regional part of spinal cord9.34e-135
gray matter of spinal cord9.34e-135
ectoderm-derived structure1.30e-1295
ectoderm1.30e-1295
presumptive ectoderm1.30e-1295
regional part of nervous system1.55e-1254
nervous system2.35e-1275
neurectoderm2.43e-1264
neural plate2.43e-1264
presumptive neural plate2.43e-1264
gray matter2.57e-1234
posterior neural tube4.70e-1212
chordal neural plate4.70e-1212
neural tube1.43e-1052
neural rod1.43e-1052
future spinal cord1.43e-1052
neural keel1.43e-1052
ecto-epithelium3.49e-1073
ventral horn of spinal cord3.28e-083
basal ganglion3.57e-078
nuclear complex of neuraxis3.57e-078
aggregate regional part of brain3.57e-078
collection of basal ganglia3.57e-078
cerebral subcortex3.57e-078
structure with developmental contribution from neural crest4.77e-0792
raphe nuclei9.34e-073
reticular formation9.34e-073
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