FFCP PHASE1:Mm9::chr18:5592429..5592467,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:5592429..5592467,-
|short_description=p1@Gm10125
|description=CAGE_peak_1_at_Gm10125_5end
|association_with_transcript=0bp_to_ENSMUST00000161096,NR_033552...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=791318 | |EntrezGene=791318 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=F6USB6 | |UniProt=F6USB6 | ||
|association_with_transcript=0bp_to_ENSMUST00000161096,NR_033552,uc008dyv.2,uc008dyw.1_5end | |||
|cluster_id=chr18:5592429..5592467,- | |||
|description=CAGE_peak_1_at_Gm10125_5end | |||
|id=chr18:5592429..5592467,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.55e-15!71;UBERON:0003075!3.55e-15!71;UBERON:0007284!3.55e-15!71;UBERON:0001017!4.47e-15!73;UBERON:0005743!4.47e-15!73;UBERON:0004121!1.11e-14!102;UBERON:0000924!1.11e-14!102;UBERON:0006601!1.11e-14!102;UBERON:0000073!1.16e-14!75;UBERON:0001016!1.16e-14!75;UBERON:0000033!5.49e-14!63;UBERON:0001049!9.31e-13!52;UBERON:0005068!9.31e-13!52;UBERON:0006241!9.31e-13!52;UBERON:0007135!9.31e-13!52;UBERON:0000955!1.67e-12!50;UBERON:0006238!1.67e-12!50;UBERON:0002616!6.87e-12!49;UBERON:0003056!6.57e-11!49;UBERON:0000153!5.74e-09!94;UBERON:0003080!1.05e-08!40;UBERON:0002020!1.86e-08!34;UBERON:0002780!3.70e-08!39;UBERON:0001890!3.70e-08!39;UBERON:0006240!3.70e-08!39;UBERON:0007811!1.13e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.56e-15,64;UBERON:0003075,5.56e-15,64;UBERON:0007284,5.56e-15,64;UBERON:0001017,8.24e-15,73;UBERON:0004121,2.50e-14,95;UBERON:0000924,2.50e-14,95;UBERON:0006601,2.50e-14,95;UBERON:0001016,2.84e-14,75;UBERON:0010371,6.12e-14,73;UBERON:0000073,6.63e-14,54;UBERON:0001049,1.41e-12,52;UBERON:0005068,1.41e-12,52;UBERON:0006241,1.41e-12,52;UBERON:0007135,1.41e-12,52;UBERON:0003056,1.40e-10,49;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002616,7.78e-10,46;UBERON:0010314,8.69e-10,92;UBERON:0003080,2.98e-08,40;UBERON:0002020,6.28e-08,34;UBERON:0002780,1.09e-07,39;UBERON:0001890,1.09e-07,39;UBERON:0006240,1.09e-07,39 | |||
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|phase1_expression=2.40223270657191,0,0,0,0,0,0,1.29123323441576,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.513602189793617,1.83582845079895,0.333109761815663,1.01237633694913,0.699561878128147,0.630924330716475,0.685572168028694,0,3.656861476496,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,0,0.629484089877886,0.608261587317087,0.183546752161682,1.56478268869608,0.218025156380447,0.878744730937887,0.777719596297134,0.55994568650145,0,0.671130424230945,2.17608642603403,4.03312558970957,0.514518872071894,0.573066879877513,0.515672092277442,2.02316460859598,2.64495489636016,0.633831403506179,1.0165335962074,0,0,0,0,1.49800055259202,0.384218305321555,1.14058573539325,0.540023753326763,0.630974884054146,3.14216082844184,3.97563373712904,1.5923803897944,1.24599112323707,0.919218786610021,9.91042928994498,7.15049093277051,6.60508093001847,1.97829431595291,2.8361169516747,2.6045668527838,2.79182999001381,5.06486349028512,4.43114918552749,3.53554302568401,2.98980529678116,3.35519002485541,0.605809546665472,1.66257432234928,3.47837386442013,1.72084775396277,0,0,0,0,1.12355536105401,0.852151612890289,0.519572009205738,0.35333957451034,1.69012103732017,2.56652954828636,2.54805239706646,0,0,0,0,0.45673551887624,1.55362730188303,1.63286352971307,1.38788261412909,1.21786191324856,2.07553947530453,1.20578112442098,3.17489509266403,1.13099932196708,0.247194967734374,1.01219549843938,2.65383165584962,1.13236794963186,1.98757366614354,0,0,7.31951992528868,5.44561437714983,0.766371165625774,0.359445373517761,0,0.254140454146129,7.78911324905078,5.94750783664214,2.26177833803156,4.17178368461463,2.04572365864264,6.2336413367868,4.38051410282946,3.46253837091075,1.49288364732112,0.252722758433675,2.73574412652416,2.08192708740326,2.06911893990126,1.80062129805349,2.56198190320716,2.99360596265843,1.7935920839879,2.90475346135159,4.39795730256327,0.646703978798527,2.26927296201383,3.87092473160687,2.19195732427575,2.22437799380478,2.089512999133,4.11564272815887,4.37875387000685,0,0.772043721344145,0,0.414251545071004,0.234526059981096,1.62055855314913,1.89395788468168,0.590292695242212,0.925602677324269,0.697601834251224,1.07309360559848,1.5179494507732,1.31647879930784,0.32833492815819,1.13496333364198,1.31579988682799,0.658650345873152,1.8788898626452,3.15434922846191,1.64647379806855,0,0.264450566663544,1.06644125267617,2.09013004674395,1.15980715189884,2.21851877085677,0.444756087689741,1.14135375667535,0,0.658795818896044,1.50801125280162,1.98956472041151,0.779856348476481,0,0,0,0.948339504765408,1.5994791765362,1.1270773567308,3.46207257337034,1.35766741017338,1.75339549725796,1.83385957660346,1.62371162777562,1.255989822731,0.616985819609003,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,2.03228509183265,1.89491411770485,0.977789858652155,0.678980343100753,0.938760993154008,1.34005005953453,2.38043640886014,1.95133647857799,1.7339865851681,0.8858587585951,1.75400245523236,2.78567635016755,1.38147985492716,1.3018415272336,0,0,0,0.275936746304732,5.45872005958493,5.39173758324135,0.491804836130026,0.757412781613119,1.57754109708128,0.780877488593277,4.09304455692318,2.15071918157297,2.89638276307112,3.39691836946599,1.61924280669958,2.04579100537918,2.37172666767914,8.9969968598106,1.56134093729095,2.49291845134157,3.4206261464251,2.14461159864296,0,1.94224508923985,0.906970670894253,1.32023555829129,1.47650946440386,3.07435147943927,1.29214146584111,1.45413491791002,0,1.8962205476149,0,0,2.7235168460303,1.98067203434441,1.4229455216103,1.50035924522115,2.30542303734956,1.24858172321449,1.81003922662333,2.74018454203139,0.23467170806371,0.42366414172764,0,1.48397627647332,1.61464426695906,1.02531972377865,2.26807453605959,1.31312719796049,0.291480836629851,5.56275906031529,0.512612642393558,1.65109494370578,1.85194527369712,0.941842285023455,0.956859594047176,0.457556346413045,0.509935289981566,0.69975726161829,1.10559979043539,0.954670618015114,1.73984796469624,1.42323626988794,1.18805874903981,1.88179466413022,0.655087691238533,1.34864346384821,1.32245529160537,1.04702376793612,0.777689839750757,0,8.45539408026285,1.64468200648377,1.32366792365678,4.083474955225,3.7456348808542,3.37912250981556,4.69428954583016,2.8644964665669,1.78260885523708,6.52277126230216,3.16833006883652,1.26404448251271,0.608175645870493,0.718976700153791,0.649604114888975,0.537080087002444,0.39736270956253,0.600977247599844,0.738447635872886,0.807731599585181,0.914481679859998,1.00826185136841,0.194915761479505,0.962118416403295,0.818138315270983,0.906921534460845,0,0,0,1.15913756419314,0.750729901804728,2.56412273974171,0.428736758158132,0,5.64751842617067,4.14292712856459,4.58316410751517,1.54667864109319,2.7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| ||
|short_description=p1@Gm10125 | |||
}} | }} |
Latest revision as of 11:49, 1 October 2015
Short description: | p1@Gm10125 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10125_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 0bp_to_ENSMUST00000161096, NR_033552, uc008dyv.2, uc008dyw.1_5end |
EntrezGene: | Gm10125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.56e-15 | 64 |
neural plate | 5.56e-15 | 64 |
presumptive neural plate | 5.56e-15 | 64 |
central nervous system | 8.24e-15 | 73 |
ectoderm-derived structure | 2.50e-14 | 95 |
ectoderm | 2.50e-14 | 95 |
presumptive ectoderm | 2.50e-14 | 95 |
nervous system | 2.84e-14 | 75 |
ecto-epithelium | 6.12e-14 | 73 |
regional part of nervous system | 6.63e-14 | 54 |
neural tube | 1.41e-12 | 52 |
neural rod | 1.41e-12 | 52 |
future spinal cord | 1.41e-12 | 52 |
neural keel | 1.41e-12 | 52 |
pre-chordal neural plate | 1.40e-10 | 49 |
brain | 1.91e-10 | 47 |
future brain | 1.91e-10 | 47 |
regional part of brain | 7.78e-10 | 46 |
structure with developmental contribution from neural crest | 8.69e-10 | 92 |
anterior neural tube | 2.98e-08 | 40 |
gray matter | 6.28e-08 | 34 |
regional part of forebrain | 1.09e-07 | 39 |
forebrain | 1.09e-07 | 39 |
future forebrain | 1.09e-07 | 39 |