FFCP PHASE1:Mm9::chr18:75857081..75857107,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:75857081..75857107,-
|short_description=p3@Ctif
|description=CAGE_peak_3_at_Ctif_5end
|association_with_transcript=100bp_to_ENSMUST00000065082_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269037 | |EntrezGene=269037 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q1U6 | |UniProt=E9Q1U6 | ||
|association_with_transcript=100bp_to_ENSMUST00000065082_5end | |||
|cluster_id=chr18:75857081..75857107,- | |||
|description=CAGE_peak_3_at_Ctif_5end | |||
|id=chr18:75857081..75857107,- | |||
|ontology_enrichment_celltype=CL:0000117!2.25e-09!23;CL:0000337!2.25e-09!23;CL:0000221!2.53e-09!44;CL:0000133!2.53e-09!44;CL:0000055!2.69e-09!50;CL:0002319!3.08e-09!43;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39;CL:0000540!8.31e-07!33;CL:0000047!8.31e-07!33;CL:0000031!8.31e-07!33;CL:0000404!8.31e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.00e-10,23;CL:0000337,5.00e-10,23;CL:0000221,2.41e-09,44;CL:0000133,2.41e-09,44;CL:0002319,2.98e-09,43;CL:0000393,8.88e-08,39;CL:0000211,8.88e-08,39;CL:0000540,5.63e-07,33;CL:0000047,5.63e-07,33;CL:0000031,5.63e-07,33;CL:0000404,5.63e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-19!73;UBERON:0005743!2.97e-19!73;UBERON:0000073!1.40e-18!75;UBERON:0001016!1.40e-18!75;UBERON:0004121!4.95e-18!102;UBERON:0000924!4.95e-18!102;UBERON:0006601!4.95e-18!102;UBERON:0001049!9.38e-16!52;UBERON:0005068!9.38e-16!52;UBERON:0006241!9.38e-16!52;UBERON:0007135!9.38e-16!52;UBERON:0000955!2.95e-15!50;UBERON:0006238!2.95e-15!50;UBERON:0002616!1.16e-14!49;UBERON:0000033!1.26e-14!63;UBERON:0002346!1.80e-13!71;UBERON:0003075!1.80e-13!71;UBERON:0007284!1.80e-13!71;UBERON:0002020!1.03e-10!34;UBERON:0003056!2.48e-10!49;UBERON:0003080!4.28e-10!40;UBERON:0002780!1.55e-09!39;UBERON:0001890!1.55e-09!39;UBERON:0006240!1.55e-09!39;UBERON:0002791!1.26e-08!29;UBERON:0003528!1.26e-08!29;UBERON:0001893!1.26e-08!29;UBERON:0004111!5.54e-08!122;UBERON:0000025!1.25e-07!114;UBERON:0003076!5.62e-07!12;UBERON:0003057!5.62e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.86e-20,73;UBERON:0004121,3.25e-19,95;UBERON:0000924,3.25e-19,95;UBERON:0006601,3.25e-19,95;UBERON:0001016,5.18e-19,75;UBERON:0000073,5.49e-18,54;UBERON:0001049,1.01e-16,52;UBERON:0005068,1.01e-16,52;UBERON:0006241,1.01e-16,52;UBERON:0007135,1.01e-16,52;UBERON:0010371,1.03e-15,73;UBERON:0002346,3.17e-15,64;UBERON:0003075,3.17e-15,64;UBERON:0007284,3.17e-15,64;UBERON:0000955,2.76e-14,47;UBERON:0006238,2.76e-14,47;UBERON:0002616,1.12e-13,46;UBERON:0010314,1.68e-11,92;UBERON:0002020,2.05e-11,34;UBERON:0003056,5.64e-11,49;UBERON:0003080,9.71e-11,40;UBERON:0002780,3.78e-10,39;UBERON:0001890,3.78e-10,39;UBERON:0006240,3.78e-10,39;UBERON:0003528,3.31e-09,29;UBERON:0002791,3.31e-09,29;UBERON:0001893,3.31e-09,29;UBERON:0003076,2.92e-07,12;UBERON:0003057,2.92e-07,12;UBERON:0004111,5.33e-07,122;UBERON:0000025,8.05e-07,114 | |||
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| ||
|short_description=p3@Ctif | |||
}} | }} |
Latest revision as of 17:41, 1 October 2015
Short description: | p3@Ctif |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ctif_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENSMUST00000065082_5end |
EntrezGene: | Ctif |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.00e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.00e-10 | 23 |
ectodermal cell | 2.41e-09 | 44 |
neurectodermal cell | 2.41e-09 | 44 |
neural cell | 2.98e-09 | 43 |
electrically responsive cell | 8.88e-08 | 39 |
electrically active cell | 8.88e-08 | 39 |
neuron | 5.63e-07 | 33 |
neuronal stem cell | 5.63e-07 | 33 |
neuroblast | 5.63e-07 | 33 |
electrically signaling cell | 5.63e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.86e-20 | 73 |
ectoderm-derived structure | 3.25e-19 | 95 |
ectoderm | 3.25e-19 | 95 |
presumptive ectoderm | 3.25e-19 | 95 |
nervous system | 5.18e-19 | 75 |
regional part of nervous system | 5.49e-18 | 54 |
neural tube | 1.01e-16 | 52 |
neural rod | 1.01e-16 | 52 |
future spinal cord | 1.01e-16 | 52 |
neural keel | 1.01e-16 | 52 |
ecto-epithelium | 1.03e-15 | 73 |
neurectoderm | 3.17e-15 | 64 |
neural plate | 3.17e-15 | 64 |
presumptive neural plate | 3.17e-15 | 64 |
brain | 2.76e-14 | 47 |
future brain | 2.76e-14 | 47 |
regional part of brain | 1.12e-13 | 46 |
structure with developmental contribution from neural crest | 1.68e-11 | 92 |
gray matter | 2.05e-11 | 34 |
pre-chordal neural plate | 5.64e-11 | 49 |
anterior neural tube | 9.71e-11 | 40 |
regional part of forebrain | 3.78e-10 | 39 |
forebrain | 3.78e-10 | 39 |
future forebrain | 3.78e-10 | 39 |
brain grey matter | 3.31e-09 | 29 |
regional part of telencephalon | 3.31e-09 | 29 |
telencephalon | 3.31e-09 | 29 |
posterior neural tube | 2.92e-07 | 12 |
chordal neural plate | 2.92e-07 | 12 |
anatomical conduit | 5.33e-07 | 122 |
tube | 8.05e-07 | 114 |