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FFCP PHASE1:Mm9::chr19:5107027..5107038,-: Difference between revisions

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(Created page with "{{FFCP |id=chr19:5107027..5107038,- |short_description=p2@Rab1b |description=CAGE_peak_2_at_Rab1b_5end |association_with_transcript=-8bp_to_ENSMUST00000025804_5end |Entre...")
 
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{{FFCP
{{FFCP
|id=chr19:5107027..5107038,-
|DHSsupport=NA
|short_description=p2@Rab1b
|DPIdataset=NA
|description=CAGE_peak_2_at_Rab1b_5end
|association_with_transcript=-8bp_to_ENSMUST00000025804_5end
|EntrezGene=76308
|EntrezGene=76308
|HGNC=
|HGNC=
|MCL_coexpression_id=1511
|TSSclassifier=NA
|UniProt=Q9D1G1
|UniProt=Q9D1G1
|association_with_transcript=-8bp_to_ENSMUST00000025804_5end
|cluster_id=chr19:5107027..5107038,-
|description=CAGE_peak_2_at_Rab1b_5end
|id=chr19:5107027..5107038,-
|ontology_enrichment_celltype=CL:0000221!4.26e-15!44;CL:0000133!4.26e-15!44;CL:0002319!9.44e-15!43;CL:0000055!4.89e-13!50;CL:0000117!1.45e-11!23;CL:0000337!1.45e-11!23;CL:0000540!7.79e-10!33;CL:0000047!7.79e-10!33;CL:0000031!7.79e-10!33;CL:0000404!7.79e-10!33;CL:0000393!2.67e-09!39;CL:0000211!2.67e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.39e-15,44;CL:0000133,2.39e-15,44;CL:0002319,5.35e-15,43;CL:0000117,7.04e-12,23;CL:0000337,7.04e-12,23;CL:0000540,5.12e-10,33;CL:0000047,5.12e-10,33;CL:0000031,5.12e-10,33;CL:0000404,5.12e-10,33;CL:0000393,1.82e-09,39;CL:0000211,1.82e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.49e-18!75;UBERON:0001016!1.49e-18!75;UBERON:0001017!7.50e-18!73;UBERON:0005743!7.50e-18!73;UBERON:0004121!9.26e-16!102;UBERON:0000924!9.26e-16!102;UBERON:0006601!9.26e-16!102;UBERON:0001049!1.69e-14!52;UBERON:0005068!1.69e-14!52;UBERON:0006241!1.69e-14!52;UBERON:0007135!1.69e-14!52;UBERON:0002346!5.19e-14!71;UBERON:0003075!5.19e-14!71;UBERON:0007284!5.19e-14!71;UBERON:0000033!5.43e-12!63;UBERON:0000955!8.24e-12!50;UBERON:0006238!8.24e-12!50;UBERON:0002616!1.64e-11!49;UBERON:0002020!1.70e-10!34;UBERON:0003056!5.72e-10!49;UBERON:0002780!9.13e-10!39;UBERON:0001890!9.13e-10!39;UBERON:0006240!9.13e-10!39;UBERON:0003080!1.07e-09!40;UBERON:0002791!2.38e-08!29;UBERON:0003528!2.38e-08!29;UBERON:0001893!2.38e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-18,75;UBERON:0001017,5.29e-18,73;UBERON:0004121,1.01e-15,95;UBERON:0000924,1.01e-15,95;UBERON:0006601,1.01e-15,95;UBERON:0010314,1.50e-14,92;UBERON:0001049,1.61e-14,52;UBERON:0005068,1.61e-14,52;UBERON:0006241,1.61e-14,52;UBERON:0007135,1.61e-14,52;UBERON:0002346,2.76e-14,64;UBERON:0003075,2.76e-14,64;UBERON:0007284,2.76e-14,64;UBERON:0000073,6.86e-14,54;UBERON:0010371,2.95e-12,73;UBERON:0000955,5.22e-12,47;UBERON:0006238,5.22e-12,47;UBERON:0002616,1.05e-11,46;UBERON:0002020,1.80e-10,34;UBERON:0003056,5.82e-10,49;UBERON:0002780,9.54e-10,39;UBERON:0001890,9.54e-10,39;UBERON:0006240,9.54e-10,39;UBERON:0003080,1.11e-09,40;UBERON:0003528,2.60e-08,29;UBERON:0002791,2.60e-08,29;UBERON:0001893,2.60e-08,29
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|phase1_expression=3.04282809499109,0.697950815278722,2.72999543633722,1.20985684522732,0.500895729946347,0.839396359559449,0.934450562382103,1.16210991097419,0.140788722151667,0.234064526321993,0.68487187290202,0.8774937489487,0.684802919724823,1.66098764596095,0.333109761815663,1.01237633694913,1.39912375625629,2.36596624018678,0.959801035240171,0.42438965179803,3.82694805679814,1.48936426801328,1.04479915655574,0.799962113967033,0.68822784320151,0,0,1.72376986148711,0.760093677825496,0.252030129759931,0.443461021310609,4.44521471421742,3.69038872550742,0,1.1554064790051,1.16364251750945,0,1.25559489221072,2.3440060335714,0.523523743973798,2.35292595212406,4.09827290975067,2.42755176515577,1.38486499773135,1.62203089951223,2.0190142737785,4.69434806608824,6.1047043786525,5.05278220289285,4.27745777963423,2.93971485413261,5.75010257459886,1.34226084846189,0,0.336093799142464,1.02903774414379,2.57880095944881,2.57836046138721,5.05791152148994,7.40587370980846,8.23980824558033,6.43804610931351,8.00365316500025,4.04954872776629,0.988866362566974,4.2628806896766,3.29560121570245,8.06858441175265,5.80661828927475,4.86021377994086,3.57552434297349,3.99911378165325,4.19650227808066,4.77714116938321,5.94241920313065,9.19218786610021,0,4.08599481872601,2.4577045320999,4.74790635828698,4.57438218012048,3.64639359389732,7.2587579740359,6.19038871034848,3.36156145108982,2.65165726926301,3.13217697758026,3.72798891650601,2.42323818666189,3.02286240427142,0,0,2.03991400112325,1.07940638327563,0,0.448026887097336,2.10666630197628,4.09032774187339,2.07828803682295,4.59341446863442,2.67602497575693,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,1.37020655662872,1.03575153458869,2.22663208597237,2.25530924795977,2.13125834818499,1.15307748628029,1.50722640552623,1.88141931417128,1.63366568728578,1.48316980640624,0.578397427679647,1.76922110389975,1.29413479957927,1.98757366614354,0.484875253135222,1.86391761218122,1.75668478206928,3.77004072264219,1.02182822083437,1.43778149407104,1.79970819298022,0.889491589511453,1.79748767285787,2.28750301409313,3.5183218591602,0.869121600961382,3.3243009452943,2.49345653471472,1.62241263067758,1.62942982160506,0.870848794270651,0.252722758433675,1.05220927943237,1.95180664444056,2.5289231487682,3.24111833649629,1.9591626318643,2.10913147369116,2.43416068541215,2.06143794031403,1.29351685369508,3.66465587985832,1.32374256117473,2.46331573829528,1.97276159184817,1.66828349535359,1.0447564995665,1.23469281844766,1.19420560091096,1.40442637462647,1.02939162845886,1.70498099637356,2.07125772535502,1.17263029990548,1.44049649168812,2.13070262026689,1.37734962223183,1.85120535464854,1.62773761325285,2.14618721119695,1.98501082024188,2.96207729844265,2.29834449710733,1.29710095273369,2.63159977365598,1.3173006917463,1.47627060636409,2.3131894342054,2.26390147234426,0,0.264450566663544,2.34617075588757,0.464473343720877,2.06187938115349,0.80673409849337,1.33426826306922,1.33157938278791,0.949058123089023,1.81168850196412,1.50801125280162,1.39269530428806,0.58489226135736,1.79763881730844,0.648414149624083,0.796565093017469,3.41402221715547,1.37098215131675,1.1270773567308,2.03651327845314,1.93952487167626,2.80543279561274,1.07502113111237,1.62371162777562,1.8839847340965,1.1105744752962,0.592905254174298,1.33476084572875,0.982794975566015,0.899448449539415,1.01430060694251,1.4470629585145,1.01850340712568,1.43848068725405,1.94562272130042,0.823684239564244,0,0.744281895337007,0.936113019343682,1.01031551178845,1.25578189465339,0,2.21703828199926,3.41084541186873,2.77040459951444,1.69745085775188,2.34690248288502,2.84760637651087,1.90434912708811,2.14647012643579,0.945810864637146,1.99318220683897,2.55127629851979,1.80249646187312,2.59027472798843,1.44649058581512,1.50791283939272,1.08781136763742,0.491764273019036,1.65562047782839,2.56880943980467,2.46144541843627,1.63934945376675,2.7771801992481,1.26203287766503,1.95219372148319,1.72338718186239,3.34556317133573,2.00518806674155,1.41538265394416,2.42886421004937,1.46127928955656,0.790575555893047,2.57057053137446,1.13552068166615,3.20518086601059,2.44330439030364,1.31976098378028,1.32745138339963,1.69946445308487,1.51161778482376,1.50884063804718,0.295301892880773,0.922305443831782,1.29214146584111,1.09060118843252,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,2.38307724027652,1.98067203434441,3.36332577835162,3.42939256050548,2.12808280370728,1.78368817602071,2.13913726782757,2.13125464380219,0.938686832254841,0.847328283455281,0.882113592219848,0.98931751764888,1.45317984026315,1.02531972377865,1.19372344003136,1.64140899745061,1.1659233465194,4.63563255026274,1.19609616558497,2.27025554759545,1.29636169158798,0.753473828018764,0.410082683163076,0.686334519619568,1.86976272993241,1.39951452323658,1.52019971184866,2.86401185404534,2.21435195506795,2.03319467126849,1.72808545314882,0.418176592028937,1.31017538247707,1.48350781023303,1.40510874733071,2.6175594198403,0.777689839750757,0.621339313086926,12.9649375897364,1.34564891439581,3.64008679005615,2.33341426012857,1.80823752868824,1.520605129417,1.87771581833206,2.47388331203505,0.838874755405687,5.07326653734613,8.3528701814781,0.632022241256357,3.44632865993279,0.821687657318618,1.55904987573354,0.895133478337407,1.58945083825012,1.56254084375959,1.9199638532695,1.11063094942962,2.362411006305,1.91569751759997,2.0466154955348,1.6356013078856,1.5193997283604,1.58711268530648,1.33191572024439,1.61484941897056,1.17519231454855,0.19318959403219,0.93841237725591,1.83151624267265,1.2862102744744,1.50471631210609,1.6942555278512,2.30162618253588,2.86447756719698,2.57779773515531,2.74033007908257,1.5107877947794,0.675022500231806,1.80128481289688,1.81256963593682,2.07104124700728,2.28332164685189,1.19707462020309,2.56100408631201,1.70174701947806,2.51535795153579,0.735374033800057,0.666740183404846,1.44224540067226,1.28367683836726,0.252697211763798,1.77435509923168,1.69763707247469,2.52832070168682,1.92075457214608,1.60819313075717,0.476293691283074,1.62238056322798,1.73618298417335,3.29668720642645,0.735994600671987,1.37147700954166,1.4198064492747,0.953744759789284,1.88950341622027,1.50575008664529,1.52306294205018,1.46342378298218,1.57841826862706,1.08643291076689,0,1.42362021749009,1.57607171800902,2.04615521584845,1.08455788830176,1.73615949883027,2.74791635731741,1.87145286756327,2.79332370262788,2.10417165275728,1.54413993383661,2.08681052058379
|short_description=p2@Rab1b
}}
}}

Latest revision as of 22:39, 25 September 2015

Short description:p2@Rab1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab1b_5end
Coexpression cluster:MCL_coexpression_mm9:1511
Association with transcript: -8bp_to_ENSMUST00000025804_5end
EntrezGene:Rab1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D92.42
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.39e-1544
neurectodermal cell2.39e-1544
neural cell5.35e-1543
CNS neuron (sensu Vertebrata)7.04e-1223
neuroblast (sensu Vertebrata)7.04e-1223
neuron5.12e-1033
neuronal stem cell5.12e-1033
neuroblast5.12e-1033
electrically signaling cell5.12e-1033
electrically responsive cell1.82e-0939
electrically active cell1.82e-0939

Uber anatomy
Ontology termp-valuen
nervous system1.03e-1875
central nervous system5.29e-1873
ectoderm-derived structure1.01e-1595
ectoderm1.01e-1595
presumptive ectoderm1.01e-1595
structure with developmental contribution from neural crest1.50e-1492
neural tube1.61e-1452
neural rod1.61e-1452
future spinal cord1.61e-1452
neural keel1.61e-1452
neurectoderm2.76e-1464
neural plate2.76e-1464
presumptive neural plate2.76e-1464
regional part of nervous system6.86e-1454
ecto-epithelium2.95e-1273
brain5.22e-1247
future brain5.22e-1247
regional part of brain1.05e-1146
gray matter1.80e-1034
pre-chordal neural plate5.82e-1049
regional part of forebrain9.54e-1039
forebrain9.54e-1039
future forebrain9.54e-1039
anterior neural tube1.11e-0940
brain grey matter2.60e-0829
regional part of telencephalon2.60e-0829
telencephalon2.60e-0829
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