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FFCP PHASE1:Mm9::chr2:25325262..25325278,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:25325262..25325278,-
|DHSsupport=NA
|short_description=p1@Ptgds
|DPIdataset=NA
|description=CAGE_peak_1_at_Ptgds_5end
|association_with_transcript=0bp_to_ENSMUST00000114259,NM_008963,uc008isf.1_5end
|EntrezGene=19215
|EntrezGene=19215
|HGNC=
|HGNC=
|MCL_coexpression_id=234
|TSSclassifier=NA
|UniProt=O09114,Q3V2G5
|UniProt=O09114,Q3V2G5
|association_with_transcript=0bp_to_ENSMUST00000114259,NM_008963,uc008isf.1_5end
|cluster_id=chr2:25325262..25325278,-
|description=CAGE_peak_1_at_Ptgds_5end
|id=chr2:25325262..25325278,-
|ontology_enrichment_celltype=CL:0000221!2.69e-07!44;CL:0000133!2.69e-07!44;CL:0002319!3.15e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000221,5.48e-07,44;CL:0000133,5.48e-07,44;CL:0002319,6.52e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.72e-23!102;UBERON:0000924!1.72e-23!102;UBERON:0006601!1.72e-23!102;UBERON:0001017!2.28e-23!73;UBERON:0005743!2.28e-23!73;UBERON:0000073!4.92e-23!75;UBERON:0001016!4.92e-23!75;UBERON:0000033!2.90e-21!63;UBERON:0002346!4.72e-20!71;UBERON:0003075!4.72e-20!71;UBERON:0007284!4.72e-20!71;UBERON:0000955!1.75e-19!50;UBERON:0006238!1.75e-19!50;UBERON:0001049!1.83e-19!52;UBERON:0005068!1.83e-19!52;UBERON:0006241!1.83e-19!52;UBERON:0007135!1.83e-19!52;UBERON:0002616!9.04e-19!49;UBERON:0003056!1.61e-16!49;UBERON:0003080!1.41e-13!40;UBERON:0002780!6.07e-13!39;UBERON:0001890!6.07e-13!39;UBERON:0006240!6.07e-13!39;UBERON:0007811!5.17e-11!86;UBERON:0002020!8.79e-11!34;UBERON:0002791!4.79e-09!29;UBERON:0003528!4.79e-09!29;UBERON:0001893!4.79e-09!29;UBERON:0000153!7.05e-09!94;UBERON:0000025!2.24e-07!114;UBERON:0002021!8.12e-07!10;UBERON:0000411!8.12e-07!10;UBERON:0001950!8.12e-07!10;UBERON:0003076!8.84e-07!12;UBERON:0003057!8.84e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.67e-25,95;UBERON:0000924,3.67e-25,95;UBERON:0006601,3.67e-25,95;UBERON:0001017,3.09e-23,73;UBERON:0001016,6.60e-23,75;UBERON:0002346,7.60e-22,64;UBERON:0003075,7.60e-22,64;UBERON:0007284,7.60e-22,64;UBERON:0010371,3.78e-21,73;UBERON:0000073,2.19e-20,54;UBERON:0001049,4.73e-19,52;UBERON:0005068,4.73e-19,52;UBERON:0006241,4.73e-19,52;UBERON:0007135,4.73e-19,52;UBERON:0010314,7.15e-18,92;UBERON:0000955,4.45e-17,47;UBERON:0006238,4.45e-17,47;UBERON:0002616,2.31e-16,46;UBERON:0003056,4.98e-16,49;UBERON:0003080,5.98e-13,40;UBERON:0002780,2.67e-12,39;UBERON:0001890,2.67e-12,39;UBERON:0006240,2.67e-12,39;UBERON:0002020,2.09e-10,34;UBERON:0003528,1.34e-08,29;UBERON:0002791,1.34e-08,29;UBERON:0001893,1.34e-08,29;UBERON:0002021,4.01e-07,10;UBERON:0000411,4.01e-07,10;UBERON:0001950,4.01e-07,10;UBERON:0003076,4.38e-07,12;UBERON:0003057,4.38e-07,12
|phase1_expression=6.56610273129655,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,675.243723799494,53.0213679412728,17.5003858723087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0,1114.12527435161,31.1775973624039,19.3323840806335,59.4955491167307,128.087575787207,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,6.67644320836673,26.4495489636016,90.6378907013836,4.74382344896785,49.8005085822238,0.449949858640699,7.9109309005358,0,998.567168357843,1212.97718990015,19.1825782770684,0.945041568321835,0.420649922702764,480.750606751601,957.023387943341,0.857435594504678,1.53352753629178,1.83843757322004,2969.82531055351,2141.82740904094,762.19561801748,16.8814448294648,42.9077048495301,171.901412283731,4402.71589425178,8218.58515690265,8395.19412760128,336.465844610929,101.653380090559,19.3855423658313,14.7666076999709,1.13357340160178,1.15945795480671,18.9293252935905,14.2793980078628,9.71465744948071,8.4470934268197,6.72040330646003,212.492407659341,0,0,0,17.182897212755,0,0,0,0,0,0,111.100914966645,1.03575153458869,0.445326417194474,0.867426633830679,2.74018930480927,1.84492397804847,1.20578112442098,28.5740558339763,0.628332956648377,2.22475470960936,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,1971.87866787277,2380.36182293492,0,0.359445373517761,1.19980546198682,0.127070227073065,2480.53298854386,779.123526600121,23.7486725493314,2317.07818816305,2555.36456510199,1437.89326835216,1980.80358079425,11.5078481150857,15.7996852674818,992.694995127474,1046.94823303521,3.6433724029557,26.8985462187163,49.1569614368603,133.524468602444,161.314539487798,248.284389912039,245.873325244728,1455.98257051918,0,0,0,0.657587197282725,0.278047249225598,2.78601733217733,5.14455341019859,62.0986912473699,0.702213187313235,0,0.284163499395593,0,0.234526059981096,2.34080679899319,6.62885259638589,16.1346670032871,26.2254091908543,33.7174219888091,50.703672864528,73.9124617184183,37.0259662305331,18.0584210487005,7.1340552400353,13.0117988808546,42.5927223664638,249.08711321925,1196.97038722701,381.15868425287,0.660837565967596,0.528901133327089,1.06644125267617,2.55460339046482,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.988193728344065,0.502670417600539,0.397912944082302,0,0,0,0,0,0.342745537829186,0,2.03651327845314,1.35766741017338,1.33258057791605,28.3299686316673,13.1373031701846,19.6248409801719,30.1089079969193,9.48648406678877,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.936113019343682,0,2.69096120282868,19.2977408545347,0.369506380333209,0.37898282354097,0.814824882210129,0.509235257325564,1.64283173801951,1.17254380209271,1.19021820443007,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,3385.53029107257,3148.77474861295,0,0.252470927204373,2.83957397474631,1.56175497718655,6.89354872744957,16.010909462821,18.2694912747563,16.4184387857523,14.9779959619711,15.7818163272108,12.2539211163422,3196.18313444771,3.40656204499845,12.2865266530406,8.47012188638596,2.14461159864296,0,0.728341908464944,1.51161778482376,3.77210159511796,4.42952839321159,3.3817866273832,4.13485269069154,2.54473610634254,1.06949213515416,0,1.05418608574999,0,126.303093734655,0.900305470156551,102.84015360729,312.717734111093,780.829048726931,1343.6523029964,781.772396880677,863.767060638118,149.720549744647,5.2958017715955,0.661585194164886,18.7970328353287,18.8913379234209,38.0574556296663,91.3198431623994,64.9997962990443,0,1416.64930736029,0.341741761595705,1.44470807574256,0.740778109478847,1.31857919903284,0,0,1.69978429993855,1.39951452323658,0.967399816630967,0.954670618015114,0.158167996790568,1.21991680276109,0.216010681643603,2.29997125615916,1.9652630737156,0.269728692769641,1.23980183588004,0,0,0,164.598338095784,246.253751334433,271.35192434964,197.951309734241,284.926570591875,374.406774087564,353.949431755594,29.9470085141085,1.8874681996628,1.69108884578204,27.938910607013,0.632022241256357,0,0.205421914329655,0.389762468933385,1.07416017400489,0.993406773906324,2.16351809135944,2.06765338044408,1.21159739937777,1.37172251979,2.01652370273681,2.82627854145282,2.5977197242889,2.45441494581295,2.0405734525369,0,0,0,0.19318959403219,2.25218970541418,0.183151624267265,0.428736758158132,0,586.212412636515,541.34247813244,755.076286713125,951.207364272311,1222.18721527083,1263.01859643558,1119.18730538433,1431.12078384657,1306.86270751045,1299.06062218532,0,1.19707462020309,4.60980735536162,38.897074730927,7.33646069197938,23.8996560985018,92.4546387654719,98.8968274746692,77.6624487212193,85.9170519996911,88.9712342614742,99.4060819104622,110.496978814461,100.391438970835,107.806375229686,81.9225149006887,82.1619870949025,99.9269762001992,62.2249710212993,80.2234114732465,92.2318288916767,102.935967572416,108.488466426031,108.719119640982,98.6266306752665,110.929750945988,110.488495615155,103.912536017948,102.260497725934,88.0993366502649,90.2812487924965,95.450843421921,56.4738839574171,99.1595783590182,73.1116055618526,263.550159724533,106.438881842661,104.427332267473,115.920729233719,72.1333940520816,57.0394875626237
|phase1_expression=6.56610273129655,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,675.243723799494,53.0213679412728,17.5003858723087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0,1114.12527435161,31.1775973624039,19.3323840806335,59.4955491167307,128.087575787207,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,6.67644320836673,26.4495489636016,90.6378907013836,4.74382344896785,49.8005085822238,0.449949858640699,7.9109309005358,0,998.567168357843,1212.97718990015,19.1825782770684,0.945041568321835,0.420649922702764,480.750606751601,957.023387943341,0.857435594504678,1.53352753629178,1.83843757322004,2969.82531055351,2141.82740904094,762.19561801748,16.8814448294648,42.9077048495301,171.901412283731,4402.71589425178,8218.58515690265,8395.19412760128,336.465844610929,101.653380090559,19.3855423658313,14.7666076999709,1.13357340160178,1.15945795480671,18.9293252935905,14.2793980078628,9.71465744948071,8.4470934268197,6.72040330646003,212.492407659341,0,0,0,17.182897212755,0,0,0,0,0,0,111.100914966645,1.03575153458869,0.445326417194474,0.867426633830679,2.74018930480927,1.84492397804847,1.20578112442098,28.5740558339763,0.628332956648377,2.22475470960936,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,1971.87866787277,2380.36182293492,0,0.359445373517761,1.19980546198682,0.127070227073065,2480.53298854386,779.123526600121,23.7486725493314,2317.07818816305,2555.36456510199,1437.89326835216,1980.80358079425,11.5078481150857,15.7996852674818,992.694995127474,1046.94823303521,3.6433724029557,26.8985462187163,49.1569614368603,133.524468602444,161.314539487798,248.284389912039,245.873325244728,1455.98257051918,0,0,0,0.657587197282725,0.278047249225598,2.78601733217733,5.14455341019859,62.0986912473699,0.702213187313235,0,0.284163499395593,0,0.234526059981096,2.34080679899319,6.62885259638589,16.1346670032871,26.2254091908543,33.7174219888091,50.703672864528,73.9124617184183,37.0259662305331,18.0584210487005,7.1340552400353,13.0117988808546,42.5927223664638,249.08711321925,1196.97038722701,381.15868425287,0.660837565967596,0.528901133327089,1.06644125267617,2.55460339046482,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.988193728344065,0.502670417600539,0.397912944082302,0,0,0,0,0,0.342745537829186,0,2.03651327845314,1.35766741017338,1.33258057791605,28.3299686316673,13.1373031701846,19.6248409801719,30.1089079969193,9.48648406678877,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.936113019343682,0,2.69096120282868,19.2977408545347,0.369506380333209,0.37898282354097,0.814824882210129,0.509235257325564,1.64283173801951,1.17254380209271,1.19021820443007,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,3385.53029107257,3148.77474861295,0,0.252470927204373,2.83957397474631,1.56175497718655,6.89354872744957,16.010909462821,18.2694912747563,16.4184387857523,14.9779959619711,15.7818163272108,12.2539211163422,3196.18313444771,3.40656204499845,12.2865266530406,8.47012188638596,2.14461159864296,0,0.728341908464944,1.51161778482376,3.77210159511796,4.42952839321159,3.3817866273832,4.13485269069154,2.54473610634254,1.06949213515416,0,1.05418608574999,0,126.303093734655,0.900305470156551,102.84015360729,312.717734111093,780.829048726931,1343.6523029964,781.772396880677,863.767060638118,149.720549744647,5.2958017715955,0.661585194164886,18.7970328353287,18.8913379234209,38.0574556296663,91.3198431623994,64.9997962990443,0,1416.64930736029,0.341741761595705,1.44470807574256,0.740778109478847,1.31857919903284,0,0,1.69978429993855,1.39951452323658,0.967399816630967,0.954670618015114,0.158167996790568,1.21991680276109,0.216010681643603,2.29997125615916,1.9652630737156,0.269728692769641,1.23980183588004,0,0,0,164.598338095784,246.253751334433,271.35192434964,197.951309734241,284.926570591875,374.406774087564,353.949431755594,29.9470085141085,1.8874681996628,1.69108884578204,27.938910607013,0.632022241256357,0,0.205421914329655,0.389762468933385,1.07416017400489,0.993406773906324,2.16351809135944,2.06765338044408,1.21159739937777,1.37172251979,2.01652370273681,2.82627854145282,2.5977197242889,2.45441494581295,2.0405734525369,0,0,0,0.19318959403219,2.25218970541418,0.183151624267265,0.428736758158132,0,586.212412636515,541.34247813244,755.076286713125,951.207364272311,1222.18721527083,1263.01859643558,1119.18730538433,1431.12078384657,1306.86270751045,1299.06062218532,0,1.19707462020309,4.60980735536162,38.897074730927,7.33646069197938,23.8996560985018,92.4546387654719,98.8968274746692,77.6624487212193,85.9170519996911,88.9712342614742,99.4060819104622,110.496978814461,100.391438970835,107.806375229686,81.9225149006887,82.1619870949025,99.9269762001992,62.2249710212993,80.2234114732465,92.2318288916767,102.935967572416,108.488466426031,108.719119640982,98.6266306752665,110.929750945988,110.488495615155,103.912536017948,102.260497725934,88.0993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|short_description=p1@Ptgds
}}
}}

Latest revision as of 10:23, 26 September 2015

Short description:p1@Ptgds
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ptgds_5end
Coexpression cluster:MCL_coexpression_mm9:234
Association with transcript: 0bp_to_ENSMUST00000114259, NM_008963, uc008isf.1_5end
EntrezGene:Ptgds
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ptgds

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3675.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H253.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71114.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C359.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C4128.09
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C790.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D149.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8998.57
Mouse Microglia, donor2.CNhs12634.11736-123E81212.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1480.75
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5957.02
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32969.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32141.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7762.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8171.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44402.72
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58218.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68395.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6336.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6101.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.39
Mouse Schwann, donor1.CNhs12507.11728-123D914.77
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7212.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6111.10
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C128.57
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21971.88
cerebellum, neonate N30.CNhs11135.1395-42I22380.36
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42480.53
corpus striatum, adult.CNhs10487.19-21D8779.12
corpus striatum, neonate N00.CNhs11226.630-43F123.75
cortex, adult.CNhs10473.12-14D52317.08
cortex, neonate N30.CNhs11107.1392-42F22555.36
diencephalon, adult.CNhs10482.20-12F21437.89
diencephalon, neonate N30.CNhs11201.1388-42B21980.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.80
epididymis, adult.CNhs10490.58-23B2992.69
eyeball, adult.CNhs10484.31-12G41046.95
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E226.90
eyeball, embryo E15.CNhs10593.426-16C949.16
eyeball, embryo E17.CNhs11023.1261-18D4133.52
eyeball, neonate N00.CNhs11207.633-15C6161.31
eyeball, neonate N01.CNhs11140.1532-43E7248.28
eyeball, neonate N02.CNhs11205.1551-44G8245.87
eyeball, neonate N16.CNhs11188.777-19A21455.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I662.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C626.23
heart, embryo E17.CNhs11025.479-18E533.72
heart, embryo E18.CNhs11030.1283-20G350.70
heart, neonate N00.CNhs11213.639-21E373.91
heart, neonate N03.CNhs11221.1349-25I237.03
heart, neonate N10.CNhs11118.749-24G118.06
heart, neonate N16.CNhs11209.782-15G17.13
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D342.59
heart, neonate N30.CNhs11202.1390-42D2249.09
hippocampus, adult.CNhs10478.13-16E81196.97
hippocampus, neonate N00.CNhs11228.627-43G1381.16
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D528.33
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F319.62
kidney, neonate N30.CNhs11203.1385-42H130.11
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23385.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33148.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I93196.18
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H712.29
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G8126.30
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C7102.84
pituitary gland, embryo E14.CNhs11037.398-44A5312.72
pituitary gland, embryo E15.CNhs10592.427-16B9780.83
pituitary gland, embryo E16.CNhs11036.449-43F61343.65
pituitary gland, embryo E17.CNhs11039.1265-44F5781.77
pituitary gland, neonate N00.CNhs11190.1308-22E9863.77
placenta, adult pregnant day10.CNhs10472.539-13I7149.72
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C318.80
skin, neonate N00.CNhs11124.650-25G418.89
skin, neonate N03.CNhs11215.662-22H338.06
skin, neonate N06.CNhs11097.693-20I591.32
skin, neonate N10.CNhs11108.762-6C465.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91416.65
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5164.60
testis, embryo E13.CNhs11031.389-23F5246.25
testis, embryo E15.CNhs11034.443-27C5271.35
testis, embryo E16.CNhs11033.470-26G5197.95
testis, embryo E17.CNhs11029.486-18I5284.93
testis, embryo E18.CNhs11027.503-18G5374.41
testis, neonate N00.CNhs11189.1300-22B7353.95
testis, neonate N07.CNhs11222.726-26I429.95
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E227.94
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1586.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2541.34
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3755.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7951.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41222.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51263.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61119.19
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71431.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81306.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91299.06
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D238.90
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F223.90
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G592.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G598.90
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G577.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G585.92
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G588.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G599.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5110.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5100.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5107.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G581.92
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G582.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G599.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G562.22
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G580.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G592.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5102.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5108.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5108.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G598.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5110.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5110.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5103.91
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5102.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G588.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G590.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G595.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G556.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G599.16
whole body, embryo E17.5.CNhs10513.490-9F973.11
whole body, embryo E17.CNhs10517.475-3I5263.55
whole body, embryo E18.CNhs10516.493-3B3106.44
whole body, neonate N00.CNhs10525.657-19C2104.43
whole body, neonate N01.CNhs10576.659-23C6115.92
whole body, neonate N06.CNhs10515.692-21D172.13
whole body, neonate N10.CNhs10518.761-6B457.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell5.48e-0744
neurectodermal cell5.48e-0744
neural cell6.52e-0743

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.67e-2595
ectoderm3.67e-2595
presumptive ectoderm3.67e-2595
central nervous system3.09e-2373
nervous system6.60e-2375
neurectoderm7.60e-2264
neural plate7.60e-2264
presumptive neural plate7.60e-2264
ecto-epithelium3.78e-2173
regional part of nervous system2.19e-2054
neural tube4.73e-1952
neural rod4.73e-1952
future spinal cord4.73e-1952
neural keel4.73e-1952
structure with developmental contribution from neural crest7.15e-1892
brain4.45e-1747
future brain4.45e-1747
regional part of brain2.31e-1646
pre-chordal neural plate4.98e-1649
anterior neural tube5.98e-1340
regional part of forebrain2.67e-1239
forebrain2.67e-1239
future forebrain2.67e-1239
gray matter2.09e-1034
brain grey matter1.34e-0829
regional part of telencephalon1.34e-0829
telencephalon1.34e-0829
occipital lobe4.01e-0710
visual cortex4.01e-0710
neocortex4.01e-0710
posterior neural tube4.38e-0712
chordal neural plate4.38e-0712
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