FFCP PHASE1:Mm9::chr8:107607653..107607657,+: Difference between revisions
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|id=chr8:107607653..107607657,+
|short_description=p1@Ces3b
|description=CAGE_peak_1_at_Ces3b_5end
|association_with_transcript=0bp_to_ENSMUST00000093221,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13909 | |EntrezGene=13909 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8K9,Q8VCU1,Q63880 | |UniProt=G5E8K9,Q8VCU1,Q63880 | ||
|association_with_transcript=0bp_to_ENSMUST00000093221,ENSMUST00000166357,ENSMUST00000173838,NM_001159415,NM_144511,uc009nbn.2,uc012gjc.1_5end | |||
|cluster_id=chr8:107607653..107607657,+ | |||
|description=CAGE_peak_1_at_Ces3b_5end | |||
|id=chr8:107607653..107607657,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.68e-13!5;CL:0000417!4.68e-13!5;CL:0000668!4.68e-13!5;CL:0000412!4.68e-13!5;CL:0000182!4.68e-13!5;CL:0000066!3.26e-11!25;CL:0000223!3.29e-08!20;CL:0000473!2.06e-07!3;CL:0000627!2.06e-07!3;CL:0000682!2.06e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.94e-30,5;CL:0000223,1.66e-10,20;CL:0000066,2.50e-08,25;CL:0000057,1.59e-07,1;CL:0000632,1.59e-07,1;CL:0000213,5.53e-07,1;CL:0002078,5.53e-07,1;CL:0000115,5.53e-07,1;CL:0002262,5.53e-07,1;CL:1000398,5.53e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.35e-12!22;UBERON:0007499!8.35e-12!22;UBERON:0006925!8.35e-12!22;UBERON:0009497!8.35e-12!22;UBERON:0000015!8.35e-12!22;UBERON:0002423!8.35e-12!22;UBERON:0006235!8.35e-12!22;UBERON:0008835!8.35e-12!22;UBERON:0003894!8.35e-12!22;UBERON:0004161!8.35e-12!22;UBERON:0008836!8.35e-12!22;UBERON:0009854!3.52e-11!23;UBERON:0009856!3.52e-11!23;UBERON:0003914!2.02e-10!47;UBERON:0002365!4.41e-10!25;UBERON:0002330!4.41e-10!25;UBERON:0003929!1.60e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.93e-26,22;UBERON:0007499,2.93e-26,22;UBERON:0006925,2.93e-26,22;UBERON:0009497,2.93e-26,22;UBERON:0000015,2.93e-26,22;UBERON:0002423,2.93e-26,22;UBERON:0006235,2.93e-26,22;UBERON:0008835,2.93e-26,22;UBERON:0003894,2.93e-26,22;UBERON:0004161,2.93e-26,22;UBERON:0008836,2.93e-26,22;UBERON:0009854,4.51e-25,23;UBERON:0009856,4.51e-25,23;UBERON:0002365,5.58e-23,25;UBERON:0002330,5.58e-23,25;UBERON:0005256,8.40e-15,45;UBERON:0005172,1.74e-13,49;UBERON:0005173,1.74e-13,49;UBERON:0002417,1.74e-13,49;UBERON:0000916,1.74e-13,49;UBERON:0003929,7.07e-12,55;UBERON:0003914,1.12e-11,47;UBERON:0002368,9.22e-11,60;UBERON:0003104,1.46e-10,61;UBERON:0009142,1.46e-10,61;UBERON:0002530,7.95e-10,65;UBERON:0000490,1.15e-09,66;UBERON:0009569,1.18e-09,66;UBERON:0005911,3.49e-09,69;UBERON:0000949,9.87e-09,72;UBERON:0005177,7.88e-08,79;UBERON:0001041,9.93e-08,80;UBERON:0002394,5.53e-07,1;UBERON:0001281,5.53e-07,1;UBERON:0000353,5.53e-07,1;UBERON:0003497,5.53e-07,1;UBERON:0003909,5.53e-07,1;UBERON:0003928,5.53e-07,1;UBERON:0003835,5.53e-07,1;UBERON:0003513,5.53e-07,1;UBERON:0001280,5.53e-07,1;UBERON:0004647,5.53e-07,1;UBERON:0002294,5.53e-07,1;UBERON:0001173,5.53e-07,1;UBERON:0004912,5.53e-07,1;UBERON:0005171,5.53e-07,1 | |||
|phase1_expression=0,0.348975407639361,2.27499619694768,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,688.339101585109,399.823144220157,575.863305477551,923.332289193138,783.59902553324,107.43998140079,0,0,0,0,0,0,0,0,0,0,85.5237259095759,0,2.07818994690755,0,0,0,0,0,0.628332956648377,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.658795818896044,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,363.450920808845,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,5.30415643688935,161.098877342677,157.276587964458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0,0,0.566153061577665,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,2.27499619694768,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,688.339101585109,399.823144220157,575.863305477551,923.332289193138,783.59902553324,107.43998140079,0,0,0,0,0,0,0,0,0,0,85.5237259095759,0,2.07818994690755,0,0,0,0,0,0.628332956648377,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.658795818896044,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,363.450920808845,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,5.30415643688935,161.098877342677,157.276587964458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0,0,0.566153061577665,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Ces3b | |||
}} | }} |
Latest revision as of 06:58, 27 September 2015
Short description: | p1@Ces3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ces3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000093221, ENSMUST00000166357, ENSMUST00000173838, NM_001159415, NM_144511, uc009nbn.2, uc012gjc.1_5end |
EntrezGene: | Ces3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.94e-30 | 5 |
endodermal cell | 1.66e-10 | 20 |
epithelial cell | 2.50e-08 | 25 |
fibroblast | 1.59e-07 | 1 |
hepatic stellate cell | 1.59e-07 | 1 |
lining cell | 5.53e-07 | 1 |
meso-epithelial cell | 5.53e-07 | 1 |
endothelial cell | 5.53e-07 | 1 |
endothelial cell of sinusoid | 5.53e-07 | 1 |
endothelial cell of hepatic sinusoid | 5.53e-07 | 1 |