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{{f5samples
{{f5samples
|id=FF:11267-116G7
|DRA_sample_Accession=CAGE@SAMD00004785
|name=Endothelial Cells - Vein, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004785
|sample_id=11267
|accession_numbers=CAGE;DRX008234;DRR009106;DRZ000531;DRZ001916;DRZ011881;DRZ013266
|rna_tube_id=116G7
|accession_numbers_RNASeq=sRNA-Seq;DRX037130;DRR041496;DRZ007138
|rna_box=116
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001638,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0000487,UBERON:0003920,UBERON:0004638,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0004535,UBERON:0004537,UBERON:0004582,UBERON:0001009
|rna_position=G7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:0002543
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1684
|rna_catalog_number=CA200-R10n
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=infant
|sample_tissue=vein
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=Neonatal
|sample_ethnicity=U
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=blood vessel endothelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=Originally library704 tailing failed, these samples are now being remade in Automation6
|profile_hcage=CNhs12497,LSID916,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10009,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000071,CL:0000076,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002139,CL:0002321,CL:0002371,CL:0002543,CL:0002546
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000483,UBERON:0000487,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001009,UBERON:0001062,UBERON:0001638,UBERON:0001981,UBERON:0001986,UBERON:0002049,UBERON:0002050,UBERON:0002532,UBERON:0003081,UBERON:0003914,UBERON:0003920,UBERON:0004111,UBERON:0004120,UBERON:0004535,UBERON:0004537,UBERON:0004582,UBERON:0004638,UBERON:0004852,UBERON:0004872,UBERON:0005423,UBERON:0006914,UBERON:0006965,UBERON:0007500,UBERON:0007798
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000052
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.67!613.27!SOX18;;chr8:55370487..55370503,+!p1@SOX17!2.05!111.92!SOX17;;chr17:6926362..6926377,+!p1@BCL6B!1.87!73.59!BCL6B;;chr8:10588010..10588030,-!p1@SOX7!1.85!70.53!SOX7;;chr6:34204921..34204939,+!p3@HMGA1!1.84!1928.72!HMGA1;;chr21:39870339..39870443,-!p1@ERG!1.82!64.39!ERG;;chr1:6479968..6479986,-!p1@HES2!1.67!45.99!HES2;;chr19:13213511..13213545,-!p2@LYL1!1.64!45.99!LYL1;;chr18:53068911..53068935,-!p4@TCF4!1.41!27.60!TCF4;;chr22:19748231..19748317,+!p1@TBX1!1.41!24.53!TBX1;;chr19:13213399..13213414,-!p6@LYL1!1.35!21.46!LYL1;;chr7:27205106..27205134,-!p2@HOXA9!1.32!19.93!HOXA9;;chr12:96588368..96588394,+!p3@ELK3!1.25!44.46!ELK3;;chr10:94449703..94449718,+!p1@HHEX!1.23!61.33!HHEX;;chr16:86600426..86600441,+!p1@FOXC2!1.19!35.26!FOXC2;;chr17:46688334..46688385,-!p1@HOXB7!1.17!19.93!HOXB7;;chr19:13213555..13213568,-!p5@LYL1!1.17!13.80!LYL1;;chr17:41622925..41622976,-!p3@ETV4!1.16!19.93!ETV4;;chr19:13213662..13213686,-!p1@LYL1!1.13!18.40!LYL1;;chr19:13213465..13213478,-!p7@LYL1!1.12!12.27!LYL1;;chr20:50721803..50721857,-!p2@ZFP64!1.07!16.86!ZFP64;;chr7:27205136..27205164,-!p1@HOXA9!1.07!10.73!HOXA9;;chr7:27224842..27224872,-!p1@HOXA11!1.07!10.73!HOXA11;;chr20:42295745..42295765,+!p1@MYBL2!1.05!168.65!MYBL2;;chr18:22932080..22932170,-!p1@ZNF521!1.04!42.93!ZNF521;;chr3:128206762..128206781,-!p2@GATA2!1.03!61.33!GATA2;;chr17:41623692..41623715,-!p1@ETV4!1.02!41.40!ETV4;;chr10:94451574..94451587,+!p6@HHEX!1.01!9.20!HHEX;;chr11:65429891..65429915,-!p7@RELA!1.01!9.20!RELA;;chr20:62670299..62670342,-!p8@ZNF512B!1.01!9.20!ZNF512B;;chr17:41622765..41622821,-!p2@ETV4!1.00!13.80!ETV4;;chr20:50159198..50159299,-!p1@NFATC2!0.97!12.27!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!0.95!9.20!HOPX;;chr10:94449675..94449694,+!p2@HHEX!0.94!21.46!HHEX;;chr10:31288370..31288393,-!p3@ZNF438!0.94!7.67!ZNF438;;chr12:66218904..66218913,+!p11@HMGA2!0.94!7.67!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!0.94!7.67!HIF3A;;chr16:30406423..30406447,+!p4@ZNF48!0.94!7.67!ZNF48;;chr7:139741594..139741615,-!p5@PARP12!0.94!7.67!PARP12;;chr22:31742554..31742565,-!p4@PATZ1!0.94!7.67!PATZ1;;chr2:177053386..177053402,+!p1@HOXD1!0.94!7.67!HOXD1;;chr1:151032860..151032918,+!p1@MLLT11!0.93!91.99!MLLT11;;chr22:38597987..38598021,+!p2@MAFF!0.93!47.53!MAFF;;chr12:66218598..66218645,+!p2@HMGA2!0.90!33.73!HMGA2;;chr19:49864746..49864780,-!p2@TEAD2!0.88!9.20!TEAD2;;chr17:46687959..46688007,-!p2@HOXB7!0.88!9.20!HOXB7;;chr3:168864315..168864339,-!p2@MECOM!0.87!10.73!MECOM;;chr1:151032922..151032951,+!p2@MLLT11!0.86!10.73!MLLT11;;chr10:8096631..8096660,+!p1@GATA3!0.86!7.67!GATA3;;chr14:74256787..74256858,-!p6@C14orf43!0.85!6.13!C14orf43;;chr3:128207349..128207386,-!p3@GATA2!0.85!6.13!GATA2;;chr4:146404119..146404158,+!p9@SMAD1!0.85!6.13!SMAD1;;chr7:27195867..27195893,-!p3@HOXA7!0.85!6.13!HOXA7;;chr7:27224795..27224840,-!p2@HOXA11!0.85!6.13!HOXA11;;chr9:16705069..16705086,-!p3@BNC2!0.85!6.13!BNC2;;chr12:66218255..66218304,+!p3@HMGA2!0.84!16.86!HMGA2;;chr15:90544532..90544563,+!p1@ZNF710!0.84!12.27!ZNF710;;chr19:56152332..56152347,+!p4@ZNF580!0.83!13.80!ZNF580;;chr11:65667884..65667895,-!p2@FOSL1!0.82!23.00!FOSL1;;chr6:34204672..34204692,+!p1@HMGA1!0.81!660.79!HMGA1;;chr1:209979467..209979494,-!p1@IRF6!0.81!6.13!IRF6;;chr17:3571863..3571881,-!p1@TAX1BP3!0.80!412.42!TAX1BP3;;chr19:49865646..49865718,-!p1@TEAD2!0.80!49.06!TEAD2;;chr20:32274179..32274213,-!p1@E2F1!0.80!38.33!E2F1;;chr15:83953397..83953425,-!p1@BNC1!0.80!6.13!BNC1;;chr3:25469724..25469773,+!p1@RARB!0.79!7.67!RARB;;chr3:169381420..169381535,-!p1@MECOM!0.79!6.13!MECOM;;chr17:46622205..46622218,-!p3@HOXB2!0.79!6.13!HOXB2;;chr10:8095593..8095625,+!p3@GATA3!0.79!6.13!GATA3;;chr12:124873357..124873401,-!p1@NCOR2!0.78!64.39!NCOR2;;chr11:65430554..65430579,-!p3@RELA!0.78!13.80!RELA;;chr13:72441315..72441454,-!p1@DACH1!0.78!10.73!DACH1;;chr3:178789522..178789564,-!p2@ZMAT3!0.77!39.86!ZMAT3;;chr15:96873861..96873872,+!p9@NR2F2!0.77!10.73!NR2F2;;chr1:221052776..221052799,+!p1@HLX!0.77!9.20!HLX;;chr6:43139248..43139261,+!p4@SRF!0.77!7.67!SRF;;chr18:3448455..3448480,+!p5@TGIF1!0.76!9.20!TGIF1;;chr12:3068544..3068597,+!p1@TEAD4!0.75!30.66!TEAD4;;chr3:168865194..168865245,-!p3@MECOM!0.75!6.13!MECOM;;chr2:176987441..176987454,+!p1@HOXD9!0.75!4.60!HOXD9;;chr2:176994408..176994492,+!p1@HOXD8!0.75!4.60!HOXD8;;chr3:25469815..25469866,+!p3@RARB!0.75!4.60!RARB;;chr4:57522598..57522664,-!p3@HOPX!0.75!4.60!HOPX;;chr5:92918768..92918783,+!p8@NR2F1!0.75!4.60!NR2F1;;chr7:115670804..115670825,-!p1@TFEC!0.75!4.60!TFEC;;chr7:27183291..27183324,-!p1@HOXA5!0.75!4.60!HOXA5;;chr9:124991204..124991246,-!p1@LHX6!0.75!4.60!LHX6;;chr1:47697881..47697910,-!p4@TAL1!0.75!4.60!TAL1;;chr16:86600870..86600921,+!p2@FOXC2!0.75!4.60!FOXC2;;chr17:41622731..41622764,-!p5@ETV4!0.75!4.60!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.75!4.60!HOXB6;;chr17:6926381..6926392,+!p2@BCL6B!0.75!4.60!BCL6B;;chr18:22931979..22931992,-!p3@ZNF521!0.75!4.60!ZNF521;;chr18:53068893..53068902,-!p28@TCF4!0.7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A2!0.40!1.53!GATA2;;chr3:168864383..168864400,-!p7@MECOM!0.40!1.53!MECOM;;chr3:168865364..168865376,-!p11@MECOM!0.40!1.53!MECOM;;chr3:168865497..168865516,-!p16@MECOM!0.40!1.53!MECOM;;chr3:169381183..169381205,-!p4@MECOM!0.40!1.53!MECOM;;chr3:169381545..169381557,-!p10@MECOM!0.40!1.53!MECOM;;chr3:25469875..25469893,+!p5@RARB!0.40!1.53!RARB;;chr3:25470156..25470227,+!p2@RARB!0.40!1.53!RARB;;chr3:52001374..52001385,-!p6@PCBP4!0.40!1.53!PCBP4;;chr4:57522701..57522712,-!p10@HOPX!0.40!1.53!HOPX;;chr15:83953373..83953386,-!p2@BNC1!0.40!1.53!BNC1;;chr16:1720809..1720814,+!p6@CRAMP1L!0.40!1.53!CRAMP1L;;chr16:29819579..29819591,+!p32@MAZ!0.40!1.53!MAZ;;chr16:69419590..69419601,-!p5@TERF2!0.40!1.53!TERF2;;chr17:17740823..17740833,-!p8@SREBF1!0.40!1.53!SREBF1;;chr17:40719286..40719299,+!p6@MLX!0.40!1.53!MLX;;chr17:41623716..41623727,-!p12@ETV4!0.40!1.53!ETV4;;chr17:46621279..46621297,-!p13@HOXB2!0.40!1.53!HOXB2;;chr17:46622175..46622186,-!p12@HOXB2!0.40!1.53!HOXB2;;chr17:46655578..46655589,-!p4@HOXB4!0.40!1.53!HOXB4;;chr17:46655672..46655697,-!p3@HOXB4!0.40!1.53!HOXB4;;chr17:46703240..46703257,-!p6@HOXB9!0.40!1.53!HOXB9;;chr17:47892398..47892407,+!p2@KAT7!0.40!1.53!KAT7;;chr17:4981535..4981551,+!p2@ZFP3!0.40!1.53!ZFP3;;chr17:7387478..7387483,-!p17@ZBTB4!0.40!1.53!ZBTB4;;chr18:19749504..19749515,+!p5@GATA6!0.40!1.53!GATA6;;chr18:19751305..19751324,+!p9@GATA6!0.40!1.53!GATA6;;chr18:22932208..22932219,-!p6@ZNF521!0.40!1.53!ZNF521;;chr18:52989415..52989429,-!p63@TCF4!0.40!1.53!TCF4;;chr18:53068982..53068993,-!p20@TCF4!0.40!1.53!TCF4;;chr18:53177899..53177918,-!p33@TCF4!0.40!1.53!TCF4;;chr18:53177984..53178004,-!p17@TCF4!0.40!1.53!TCF4;;chr18:53255379..53255382,-!p45@TCF4!0.40!1.53!TCF4;;chr19:23299851..23299880,+!p2@ZNF730!0.40!1.53!ZNF730;;chr19:36545649..36545662,-!p6@THAP8!0.40!1.53!THAP8;;chr19:47523058..47523114,+!p1@NPAS1!0.40!1.53!NPAS1;;chr19:50434005..50434020,+!p10@ATF5!0.40!1.53!ATF5;;chr19:54024313..54024361,+!p7@ZNF331!0.40!1.53!ZNF331;;chr19:57791947..57791956,+!p7@ZNF460!0.40!1.53!ZNF460;;chr1:14057463..14057496,+!p4@PRDM2!0.40!1.53!PRDM2;;chr1:151032957..151032968,+!p7@MLLT11!0.40!1.53!MLLT11;;chr1:161014760..161014788,-!p4@USF1!0.40!1.53!USF1;;chr1:197886617..197886628,+!p8@LHX9!0.40!1.53!LHX9;;chr1:211432643..211432652,+!p20@RCOR3!0.40!1.53!RCOR3;;chr1:214161358..214161377,+!p3@PROX1!0.40!1.53!PROX1;;chr1:47695156..47695179,-!p10@TAL1!0.40!1.53!TAL1;;chr1:47697591..47697604,-!p11@TAL1!0.40!1.53!TAL1;;chr1:59250262..59250296,-!p5@JUN!0.40!1.53!JUN;;chr20:50179334..50179343,-!p3@NFATC2!0.40!1.53!NFATC2;;chr5:142784911..142784925,-!p15@NR3C1!0.40!1.53!NR3C1;;chr5:88185175..88185197,-!p13@MEF2C!0.40!1.53!MEF2C;;chr5:92918789..92918800,+!p12@NR2F1!0.40!1.53!NR2F1;;chr6:126111875..126111886,+!p10@NCOA7!0.40!1.53!NCOA7;;chr6:134273321..134273418,+!p4@TBPL1!0.40!1.53!TBPL1;;chr6:15245752..15245767,+!p14@JARID2!0.40!1.53!JARID2;;chr6:155635818..155635834,-!p4@TFB1M!0.40!1.53!TFB1M;;chr6:21597499..21597513,+!p16@SOX4!0.40!1.53!SOX4;;chr6:28048968..28048983,+!p3@ZNF165!0.40!1.53!ZNF165;;chr6:28321909..28321965,-!p3@ZNF323!0.40!1.53!ZNF323;;chr6:34208414..34208429,+!p16@HMGA1!0.40!1.53!HMGA1;;chr6:34210478..34210481,+!p8@HMGA1!0.40!1.53!HMGA1;;chr6:41703952..41703994,-!p4@TFEB!0.40!1.53!TFEB;;chr6:44233244..44233248,-!p3@NFKBIE!0.40!1.53!NFKBIE;;chr6:7108769..7108785,+!p11@RREB1!0.40!1.53!RREB1;;chr6:85473227..85473243,-!p5@TBX18!0.40!1.53!TBX18;;chr6:91006740..91006751,-!p6@BACH2!0.40!1.53!BACH2;;chr7:100076646..100076657,-!p10@TSC22D4!0.40!1.53!TSC22D4;;chr7:113726226..113726245,+!p3@FOXP2!0.40!1.53!FOXP2;;chr7:137620684..137620711,-!p4@CREB3L2!0.40!1.53!CREB3L2;;chr7:138665915..138665946,-!p3@KIAA1549!0.40!1.53!KIAA1549;;chr7:138666186..138666213,-!p2@KIAA1549!0.40!1.53!KIAA1549;;chr7:139741849..139741879,-!p12@PARP12!0.40!1.53!PARP12;;chr7:149470297..149470337,-!p3@ZNF467!0.40!1.53!ZNF467;;chr7:27142290..27142310,-!p1@HOXA2!0.40!1.53!HOXA2;;chr7:27153454..27153469,-!p2@HOXA3!0.40!1.53!HOXA3;;chr7:27153613..27153630,-!p6@HOXA3!0.40!1.53!HOXA3;;chr7:27169801..27169844,-!p2@HOXA4!0.40!1.53!HOXA4;;chr7:27170042..27170064,-!p4@HOXA4!0.40!1.53!HOXA4;;chr7:27170274..27170308,-!p3@HOXA4!0.40!1.53!HOXA4;;chr7:27170359..27170381,-!p1@HOXA4!0.40!1.53!HOXA4;;chr7:27192185..27192209,-!p1@HOXA3!0.40!1.53!HOXA3;;chr7:27196196..27196210,-!p5@HOXA7!0.40!1.53!HOXA7;;chr7:27205043..27205050,-!p5@HOXA9!0.40!1.53!HOXA9;;chr7:27205066..27205067,-!p7@HOXA9!0.40!1.53!HOXA9;;chr7:27205089..27205096,-!p4@HOXA9!0.40!1.53!HOXA9;;chr7:27219849..27219867,-!p6@HOXA10!0.40!1.53!HOXA10;;chr7:27224911..27224922,-!p5@HOXA11!0.40!1.53!HOXA11;;chr8:10588174..10588200,-!p3@SOX7!0.40!1.53!SOX7;;chr8:28243743..28243752,-!p10@ZNF395!0.40!1.53!ZNF395;;chr8:30891078..30891128,-!p2@PURG!0.40!1.53!PURG;;chr8:55370884..55370896,+!p5@SOX17!0.40!1.53!SOX17;;chr8:93107696..93107716,-!p8@RUNX1T1!0.40!1.53!RUNX1T1;;chr8:93115445..93115462,-!p7@RUNX1T1!0.40!1.53!RUNX1T1;;chr8:93115508..93115552,-!p6@RUNX1T1!0.40!1.53!RUNX1T1;;chr8:144623595..144623646,-!p1@ZC3H3!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Line 66: Line 43:
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|rna_box=116
|rna_catalog_number=CA200-R10n
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1684
|rna_od260/230=
|rna_od260/280=
|rna_position=G7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=116G7
|rna_weight_ug=10
|rnaseq_library_id=SRhi10009.TGACCA
|sample_age=Neonatal
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=blood vessel endothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=infant
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=U
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.48619012334391e-209!GO:0005737;cytoplasm;1.10653291707545e-185!GO:0043226;organelle;8.92922207086564e-162!GO:0043229;intracellular organelle;1.56874370688746e-161!GO:0043231;intracellular membrane-bound organelle;1.71829972621685e-154!GO:0043227;membrane-bound organelle;3.90099960726347e-154!GO:0044422;organelle part;1.17167248924475e-140!GO:0044446;intracellular organelle part;2.59239150841367e-139!GO:0044444;cytoplasmic part;1.08345169725769e-131!GO:0032991;macromolecular complex;3.76673945480692e-99!GO:0030529;ribonucleoprotein complex;3.67887299361492e-83!GO:0005515;protein binding;1.39022782433735e-80!GO:0044237;cellular metabolic process;1.41259779717188e-75!GO:0044238;primary metabolic process;1.23951113538984e-74!GO:0005739;mitochondrion;5.8030737270234e-71!GO:0043233;organelle lumen;3.28198290806607e-68!GO:0031974;membrane-enclosed lumen;3.28198290806607e-68!GO:0043170;macromolecule metabolic process;2.16431569201647e-65!GO:0044428;nuclear part;1.33835191962109e-63!GO:0003723;RNA binding;3.59504362302418e-61!GO:0019538;protein metabolic process;1.73233327259409e-54!GO:0005840;ribosome;2.13903258191477e-53!GO:0005634;nucleus;1.09846345818851e-52!GO:0043234;protein complex;2.9108943434477e-51!GO:0031090;organelle membrane;1.26898265711485e-50!GO:0006412;translation;1.66066920554694e-49!GO:0044260;cellular macromolecule metabolic process;2.2864957009169e-49!GO:0044267;cellular protein metabolic process;3.02723338711419e-49!GO:0003735;structural constituent of ribosome;2.34383730518274e-47!GO:0044429;mitochondrial part;1.20028773784987e-45!GO:0016043;cellular component organization and biogenesis;3.90376343278909e-45!GO:0009058;biosynthetic process;5.40832407405467e-43!GO:0031967;organelle envelope;9.96567521264978e-43!GO:0031975;envelope;2.25050378850133e-42!GO:0006396;RNA processing;3.76136405434146e-42!GO:0044249;cellular biosynthetic process;5.88931030847956e-42!GO:0005829;cytosol;1.65276051727661e-41!GO:0033279;ribosomal subunit;2.14803664092907e-41!GO:0031981;nuclear lumen;7.3942923081969e-41!GO:0009059;macromolecule biosynthetic process;5.27937431501099e-38!GO:0043228;non-membrane-bound organelle;5.62242078226291e-37!GO:0043232;intracellular non-membrane-bound organelle;5.62242078226291e-37!GO:0015031;protein transport;8.55516999104781e-37!GO:0033036;macromolecule localization;3.95793510328986e-36!GO:0006996;organelle organization and biogenesis;1.30835368403419e-33!GO:0045184;establishment of protein localization;2.24808622281631e-33!GO:0008104;protein localization;3.89514143441614e-33!GO:0046907;intracellular transport;4.74945937744825e-33!GO:0043283;biopolymer metabolic process;1.85935675100172e-32!GO:0005740;mitochondrial envelope;3.72887801066935e-31!GO:0065003;macromolecular complex assembly;4.16494599340304e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.85494645420632e-31!GO:0016071;mRNA metabolic process;1.44878915252158e-30!GO:0031966;mitochondrial membrane;8.30627772816679e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.13580077312588e-29!GO:0008380;RNA splicing;1.49107655387197e-28!GO:0022607;cellular component assembly;5.40324245563726e-28!GO:0019866;organelle inner membrane;5.91429699214058e-28!GO:0006397;mRNA processing;1.37027352936239e-26!GO:0006886;intracellular protein transport;1.85390999103164e-26!GO:0005743;mitochondrial inner membrane;2.42212389790394e-26!GO:0000166;nucleotide binding;5.83212825143686e-26!GO:0006259;DNA metabolic process;7.20580359065748e-26!GO:0044445;cytosolic part;5.83602280274654e-25!GO:0005654;nucleoplasm;2.13749810747652e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.06151951523649e-23!GO:0010467;gene expression;5.26316716531526e-23!GO:0007049;cell cycle;7.55687530631577e-23!GO:0051649;establishment of cellular localization;1.39699838692202e-22!GO:0051641;cellular localization;3.43678280699208e-22!GO:0015934;large ribosomal subunit;9.13186828082316e-22!GO:0005681;spliceosome;1.0129711201871e-21!GO:0006119;oxidative phosphorylation;4.15426027091553e-21!GO:0015935;small ribosomal subunit;1.07364590602319e-20!GO:0044455;mitochondrial membrane part;2.15539417669127e-20!GO:0012505;endomembrane system;2.41751480878479e-20!GO:0016462;pyrophosphatase activity;7.26619370834188e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.73913176231732e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.18818307828545e-19!GO:0044451;nucleoplasm part;1.25448273160818e-19!GO:0017111;nucleoside-triphosphatase activity;3.18302375024281e-19!GO:0017076;purine nucleotide binding;3.3838963023546e-19!GO:0032553;ribonucleotide binding;3.99873814586008e-19!GO:0032555;purine ribonucleotide binding;3.99873814586008e-19!GO:0016874;ligase activity;1.52636364333774e-18!GO:0031980;mitochondrial lumen;1.98317517378829e-18!GO:0005759;mitochondrial matrix;1.98317517378829e-18!GO:0022402;cell cycle process;5.87163726502792e-18!GO:0006457;protein folding;2.00079126615189e-17!GO:0005730;nucleolus;2.51482019141902e-17!GO:0005746;mitochondrial respiratory chain;1.08407536288325e-16!GO:0043412;biopolymer modification;1.48878479621601e-16!GO:0000278;mitotic cell cycle;2.69016266796419e-16!GO:0006605;protein targeting;3.10897968895762e-16!GO:0032559;adenyl ribonucleotide binding;3.45122186415876e-16!GO:0005783;endoplasmic reticulum;3.74896100661884e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.13576500190701e-16!GO:0030554;adenyl nucleotide binding;4.34873854961477e-16!GO:0048770;pigment granule;4.40978982686536e-16!GO:0042470;melanosome;4.40978982686536e-16!GO:0006512;ubiquitin cycle;5.02894746623285e-16!GO:0005524;ATP binding;5.35685497413503e-16!GO:0022618;protein-RNA complex assembly;6.1552474391636e-16!GO:0044432;endoplasmic reticulum part;1.3700719783679e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.83651707744778e-15!GO:0051186;cofactor metabolic process;3.70118875450584e-15!GO:0006464;protein modification process;4.09158588416293e-15!GO:0008134;transcription factor binding;4.56335387521328e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.06051486103498e-15!GO:0044265;cellular macromolecule catabolic process;7.10674922143436e-15!GO:0043285;biopolymer catabolic process;1.44713469789955e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.79541786678373e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.67501303109843e-14!GO:0009057;macromolecule catabolic process;2.77968227985854e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.89201127382152e-14!GO:0003954;NADH dehydrogenase activity;2.89201127382152e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.89201127382152e-14!GO:0008135;translation factor activity, nucleic acid binding;4.72467612779584e-14!GO:0005761;mitochondrial ribosome;1.77963465378167e-13!GO:0000313;organellar ribosome;1.77963465378167e-13!GO:0006974;response to DNA damage stimulus;2.76617650442588e-13!GO:0044248;cellular catabolic process;2.93459602408682e-13!GO:0016192;vesicle-mediated transport;3.12651543797673e-13!GO:0005794;Golgi apparatus;5.23915136290241e-13!GO:0042254;ribosome biogenesis and assembly;6.29441172745528e-13!GO:0043687;post-translational protein modification;8.5831070143482e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2012370441426e-12!GO:0019941;modification-dependent protein catabolic process;1.51554556638239e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.51554556638239e-12!GO:0051082;unfolded protein binding;1.58822741803026e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.78579851014677e-12!GO:0000375;RNA splicing, via transesterification reactions;1.78579851014677e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.78579851014677e-12!GO:0005635;nuclear envelope;1.86091401210801e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.88529307017426e-12!GO:0045271;respiratory chain complex I;1.88529307017426e-12!GO:0005747;mitochondrial respiratory chain complex I;1.88529307017426e-12!GO:0044257;cellular protein catabolic process;2.11051672875278e-12!GO:0006511;ubiquitin-dependent protein catabolic process;2.27651772307345e-12!GO:0030163;protein catabolic process;2.49553563391651e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.77106051369406e-12!GO:0042773;ATP synthesis coupled electron transport;2.77106051369406e-12!GO:0005694;chromosome;4.64947343099455e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.59540871574846e-12!GO:0016887;ATPase activity;6.7467260339359e-12!GO:0042623;ATPase activity, coupled;7.89674834808558e-12!GO:0051276;chromosome organization and biogenesis;9.68166492218546e-12!GO:0031965;nuclear membrane;9.80723776972473e-12!GO:0044427;chromosomal part;1.13533998479955e-11!GO:0022403;cell cycle phase;1.26862020278909e-11!GO:0000087;M phase of mitotic cell cycle;1.29372122180299e-11!GO:0044453;nuclear membrane part;1.30818704027319e-11!GO:0006732;coenzyme metabolic process;1.53715870266263e-11!GO:0007067;mitosis;1.57549244691909e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;2.18720533905832e-11!GO:0048193;Golgi vesicle transport;2.25112616979141e-11!GO:0003743;translation initiation factor activity;2.75518728386528e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.82727122747902e-11!GO:0006913;nucleocytoplasmic transport;3.24226559608079e-11!GO:0012501;programmed cell death;4.69595337650082e-11!GO:0009259;ribonucleotide metabolic process;4.96682040316872e-11!GO:0006163;purine nucleotide metabolic process;5.7503899512887e-11!GO:0006281;DNA repair;5.85827508430675e-11!GO:0006915;apoptosis;6.15542234330406e-11!GO:0006323;DNA packaging;6.22525184411418e-11!GO:0051169;nuclear transport;6.46064364329938e-11!GO:0005789;endoplasmic reticulum membrane;7.82252015593638e-11!GO:0051726;regulation of cell cycle;8.196190809736e-11!GO:0009719;response to endogenous stimulus;9.63627039734895e-11!GO:0009055;electron carrier activity;1.05081045958368e-10!GO:0003712;transcription cofactor activity;1.39469692553301e-10!GO:0006260;DNA replication;1.40342111602606e-10!GO:0009150;purine ribonucleotide metabolic process;1.68129602657036e-10!GO:0000785;chromatin;1.89343523739501e-10!GO:0000074;regulation of progression through cell cycle;2.06577398726771e-10!GO:0006333;chromatin assembly or disassembly;3.23861752164311e-10!GO:0006413;translational initiation;3.55174820199255e-10!GO:0051301;cell division;3.55174820199255e-10!GO:0006164;purine nucleotide biosynthetic process;4.41355557514482e-10!GO:0016604;nuclear body;5.3274770807099e-10!GO:0065004;protein-DNA complex assembly;6.292505651094e-10!GO:0006399;tRNA metabolic process;7.10797799598158e-10!GO:0009260;ribonucleotide biosynthetic process;7.77099267417462e-10!GO:0005643;nuclear pore;8.9501165414891e-10!GO:0008219;cell death;1.07051398770732e-09!GO:0016265;death;1.07051398770732e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.14329091524084e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.30535675951093e-09!GO:0065002;intracellular protein transport across a membrane;1.56720151177377e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.89851492188477e-09!GO:0003676;nucleic acid binding;4.20886968606297e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.62573006282526e-09!GO:0046930;pore complex;4.82747547851236e-09!GO:0017038;protein import;4.98542641549556e-09!GO:0005793;ER-Golgi intermediate compartment;5.19536581101642e-09!GO:0006334;nucleosome assembly;5.91688684986372e-09!GO:0006364;rRNA processing;6.0334973441039e-09!GO:0009141;nucleoside triphosphate metabolic process;6.34107470471112e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.29667508933727e-09!GO:0009056;catabolic process;7.91640219738833e-09!GO:0008639;small protein conjugating enzyme activity;7.91640219738833e-09!GO:0006446;regulation of translational initiation;8.01315637096324e-09!GO:0006793;phosphorus metabolic process;8.62429973464299e-09!GO:0006796;phosphate metabolic process;8.62429973464299e-09!GO:0000279;M phase;9.62616336719684e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.66245481117011e-09!GO:0009144;purine nucleoside triphosphate metabolic process;9.66245481117011e-09!GO:0016072;rRNA metabolic process;1.20593215410848e-08!GO:0031497;chromatin assembly;1.20593215410848e-08!GO:0004842;ubiquitin-protein ligase activity;1.20593215410848e-08!GO:0006461;protein complex assembly;1.26782620827055e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.67039461476788e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.82463306060685e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.82962912977435e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.82962912977435e-08!GO:0019787;small conjugating protein ligase activity;2.15423741483642e-08!GO:0008565;protein transporter activity;2.25666842281815e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.28242189007925e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.28242189007925e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.28242189007925e-08!GO:0048523;negative regulation of cellular process;3.5323153352638e-08!GO:0015986;ATP synthesis coupled proton transport;3.53926730883357e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.53926730883357e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.92760809497612e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.92760809497612e-08!GO:0016740;transferase activity;5.07410756288615e-08!GO:0050657;nucleic acid transport;5.28012136483734e-08!GO:0051236;establishment of RNA localization;5.28012136483734e-08!GO:0050658;RNA transport;5.28012136483734e-08!GO:0006403;RNA localization;5.55840993645462e-08!GO:0051188;cofactor biosynthetic process;6.40816063462755e-08!GO:0046034;ATP metabolic process;6.88670796084723e-08!GO:0009117;nucleotide metabolic process;7.69665752869086e-08!GO:0043038;amino acid activation;8.9277613320636e-08!GO:0006418;tRNA aminoacylation for protein translation;8.9277613320636e-08!GO:0043039;tRNA aminoacylation;8.9277613320636e-08!GO:0015630;microtubule cytoskeleton;9.56115024585148e-08!GO:0016787;hydrolase activity;1.06451394018511e-07!GO:0016491;oxidoreductase activity;1.1765917407729e-07!GO:0019829;cation-transporting ATPase activity;1.43021321258151e-07!GO:0016310;phosphorylation;1.61663127793771e-07!GO:0016881;acid-amino acid ligase activity;2.20534430634685e-07!GO:0006754;ATP biosynthetic process;2.47091436438701e-07!GO:0006753;nucleoside phosphate metabolic process;2.47091436438701e-07!GO:0009060;aerobic respiration;3.16266715380246e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.25171252561127e-07!GO:0008026;ATP-dependent helicase activity;4.14159845624355e-07!GO:0016607;nuclear speck;4.28463098758544e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.44196020274063e-07!GO:0031988;membrane-bound vesicle;4.80477395791249e-07!GO:0005788;endoplasmic reticulum lumen;7.16061210625233e-07!GO:0006366;transcription from RNA polymerase II promoter;7.24895645371683e-07!GO:0004386;helicase activity;7.24895645371683e-07!GO:0048519;negative regulation of biological process;8.6039742268982e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.44354164467898e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.73879807279261e-07!GO:0007005;mitochondrion organization and biogenesis;1.06347365693246e-06!GO:0043067;regulation of programmed cell death;1.09525756947855e-06!GO:0042981;regulation of apoptosis;1.12213788390655e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.2167539818704e-06!GO:0045333;cellular respiration;1.2750725971636e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.66680237049286e-06!GO:0006752;group transfer coenzyme metabolic process;2.31918708696841e-06!GO:0051028;mRNA transport;2.36489281719965e-06!GO:0000786;nucleosome;2.75449483399069e-06!GO:0045259;proton-transporting ATP synthase complex;2.81163044196181e-06!GO:0051170;nuclear import;2.83248110129777e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.27518125540221e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.92849080424827e-06!GO:0032446;protein modification by small protein conjugation;4.05820349397809e-06!GO:0016567;protein ubiquitination;4.25469647569909e-06!GO:0031252;leading edge;4.48941682984786e-06!GO:0009108;coenzyme biosynthetic process;5.08818357751439e-06!GO:0016070;RNA metabolic process;5.08818357751439e-06!GO:0006606;protein import into nucleus;5.25151403236699e-06!GO:0051246;regulation of protein metabolic process;6.84147824854889e-06!GO:0006916;anti-apoptosis;7.37678851190658e-06!GO:0005762;mitochondrial large ribosomal subunit;8.63350850838923e-06!GO:0000315;organellar large ribosomal subunit;8.63350850838923e-06!GO:0045786;negative regulation of progression through cell cycle;9.38094685091326e-06!GO:0005667;transcription factor complex;1.00175571968449e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.05869079634931e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.076346596518e-05!GO:0044431;Golgi apparatus part;1.114904522543e-05!GO:0051329;interphase of mitotic cell cycle;1.15781508623214e-05!GO:0006099;tricarboxylic acid cycle;1.16163847506315e-05!GO:0046356;acetyl-CoA catabolic process;1.16163847506315e-05!GO:0043069;negative regulation of programmed cell death;1.20129590462251e-05!GO:0003714;transcription corepressor activity;1.2859294205931e-05!GO:0005768;endosome;1.28791763738408e-05!GO:0005525;GTP binding;1.33407602876103e-05!GO:0000245;spliceosome assembly;1.37721684771462e-05!GO:0051187;cofactor catabolic process;1.40078115821974e-05!GO:0016568;chromatin modification;1.41019867071227e-05!GO:0031410;cytoplasmic vesicle;1.42127426745445e-05!GO:0005813;centrosome;1.44495606833059e-05!GO:0031982;vesicle;1.54123907089146e-05!GO:0000151;ubiquitin ligase complex;1.58972604737079e-05!GO:0003924;GTPase activity;1.63686661182049e-05!GO:0006084;acetyl-CoA metabolic process;1.71123520821463e-05!GO:0016779;nucleotidyltransferase activity;1.73494311676047e-05!GO:0006091;generation of precursor metabolites and energy;1.81639166746333e-05!GO:0043623;cellular protein complex assembly;1.82218423940206e-05!GO:0043066;negative regulation of apoptosis;1.88783177997145e-05!GO:0003697;single-stranded DNA binding;1.92901460300719e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.0964828054903e-05!GO:0051325;interphase;2.13171483940325e-05!GO:0007010;cytoskeleton organization and biogenesis;2.21322886510144e-05!GO:0019899;enzyme binding;2.29820430084578e-05!GO:0005769;early endosome;2.45390592252134e-05!GO:0019843;rRNA binding;2.455509750258e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.46020653688406e-05!GO:0030120;vesicle coat;2.52689793902214e-05!GO:0030662;coated vesicle membrane;2.52689793902214e-05!GO:0003713;transcription coactivator activity;2.62515561550811e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.77355339594084e-05!GO:0005815;microtubule organizing center;3.11567034455701e-05!GO:0048475;coated membrane;4.1720037836096e-05!GO:0030117;membrane coat;4.1720037836096e-05!GO:0016853;isomerase activity;4.45146981282948e-05!GO:0008047;enzyme activator activity;4.55145092408778e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.05535721245031e-05!GO:0015399;primary active transmembrane transporter activity;5.05535721245031e-05!GO:0009109;coenzyme catabolic process;5.09855716607745e-05!GO:0031968;organelle outer membrane;5.19659800808895e-05!GO:0045454;cell redox homeostasis;5.70429174496818e-05!GO:0016563;transcription activator activity;5.70916204968183e-05!GO:0065009;regulation of a molecular function;6.24028051686836e-05!GO:0019867;outer membrane;6.40428598521642e-05!GO:0009165;nucleotide biosynthetic process;6.89783412243218e-05!GO:0030867;rough endoplasmic reticulum membrane;7.90259148434694e-05!GO:0007264;small GTPase mediated signal transduction;8.5632646978072e-05!GO:0005819;spindle;8.61207518020893e-05!GO:0003724;RNA helicase activity;9.13959218796393e-05!GO:0044440;endosomal part;9.51013747276008e-05!GO:0010008;endosome membrane;9.51013747276008e-05!GO:0030029;actin filament-based process;0.000100170414609832!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000110139658774588!GO:0005096;GTPase activator activity;0.000120973742669828!GO:0008654;phospholipid biosynthetic process;0.000124581203289779!GO:0032561;guanyl ribonucleotide binding;0.000124581203289779!GO:0019001;guanyl nucleotide binding;0.000124581203289779!GO:0000139;Golgi membrane;0.000143984209855219!GO:0051087;chaperone binding;0.000147898696112025!GO:0016564;transcription repressor activity;0.000147898696112025!GO:0004298;threonine endopeptidase activity;0.000147898696112025!GO:0033116;ER-Golgi intermediate compartment membrane;0.000147898696112025!GO:0042802;identical protein binding;0.000163865251648356!GO:0016044;membrane organization and biogenesis;0.000169883835845443!GO:0005741;mitochondrial outer membrane;0.000181933254524264!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0002089315629622!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000224209652470633!GO:0008632;apoptotic program;0.000268737543279981!GO:0005770;late endosome;0.00027130880606269!GO:0043566;structure-specific DNA binding;0.000279052821924526!GO:0003899;DNA-directed RNA polymerase activity;0.000299754157093959!GO:0006613;cotranslational protein targeting to membrane;0.000308287296742802!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000316372868325367!GO:0005905;coated pit;0.000362954902358078!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000364888826347532!GO:0043681;protein import into mitochondrion;0.000380138956599457!GO:0051168;nuclear export;0.000390434808664996!GO:0051427;hormone receptor binding;0.000390434808664996!GO:0016859;cis-trans isomerase activity;0.000396697132380318!GO:0043492;ATPase activity, coupled to movement of substances;0.00039863427693545!GO:0007243;protein kinase cascade;0.0004148422592926!GO:0048522;positive regulation of cellular process;0.000433550082170564!GO:0000314;organellar small ribosomal subunit;0.000455233054750552!GO:0005763;mitochondrial small ribosomal subunit;0.000455233054750552!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000461160259200397!GO:0048471;perinuclear region of cytoplasm;0.000498959999698598!GO:0000059;protein import into nucleus, docking;0.000503965156932598!GO:0015992;proton transport;0.000557672640964051!GO:0005885;Arp2/3 protein complex;0.000602185170940338!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000612321861669437!GO:0006818;hydrogen transport;0.000622033424403941!GO:0051789;response to protein stimulus;0.000628346126354409!GO:0006986;response to unfolded protein;0.000628346126354409!GO:0007006;mitochondrial membrane organization and biogenesis;0.000650406179822599!GO:0005048;signal sequence binding;0.000669963231039002!GO:0006626;protein targeting to mitochondrion;0.000698897493637395!GO:0003684;damaged DNA binding;0.000774698114187961!GO:0035257;nuclear hormone receptor binding;0.000790542255067838!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000811687752474301!GO:0008186;RNA-dependent ATPase activity;0.000812758923975047!GO:0006414;translational elongation;0.000914063829732486!GO:0015980;energy derivation by oxidation of organic compounds;0.000915381052927155!GO:0051920;peroxiredoxin activity;0.000915381052927155!GO:0007265;Ras protein signal transduction;0.000934603673985615!GO:0050794;regulation of cellular process;0.000972908351031538!GO:0008092;cytoskeletal protein binding;0.000994762821526403!GO:0006950;response to stress;0.00109073368496155!GO:0008250;oligosaccharyl transferase complex;0.00113340245821981!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00116244187639028!GO:0044452;nucleolar part;0.00116383077763269!GO:0030880;RNA polymerase complex;0.00118273790499238!GO:0004576;oligosaccharyl transferase activity;0.00128265533113085!GO:0006839;mitochondrial transport;0.00131544529588275!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0013224764118023!GO:0005798;Golgi-associated vesicle;0.00136661870994363!GO:0005773;vacuole;0.00145200158478534!GO:0008033;tRNA processing;0.001459905813613!GO:0008094;DNA-dependent ATPase activity;0.00149225397574918!GO:0006261;DNA-dependent DNA replication;0.00165922996408808!GO:0030695;GTPase regulator activity;0.00165922996408808!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00165922996408808!GO:0043021;ribonucleoprotein binding;0.00177319062422454!GO:0006612;protein targeting to membrane;0.00190108167495417!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00201924937095279!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00201924937095279!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00201924937095279!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00205191859776322!GO:0004004;ATP-dependent RNA helicase activity;0.00210547473906337!GO:0007242;intracellular signaling cascade;0.00222290609375833!GO:0006082;organic acid metabolic process;0.00229805831168802!GO:0016126;sterol biosynthetic process;0.00230110457531015!GO:0008361;regulation of cell size;0.00252962482171379!GO:0044262;cellular carbohydrate metabolic process;0.00252962482171379!GO:0030659;cytoplasmic vesicle membrane;0.00263581496460924!GO:0007051;spindle organization and biogenesis;0.00281216695035938!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00286413702991976!GO:0000428;DNA-directed RNA polymerase complex;0.00286413702991976!GO:0019752;carboxylic acid metabolic process;0.00289585060592766!GO:0050790;regulation of catalytic activity;0.00297214137382!GO:0018196;peptidyl-asparagine modification;0.00298066804626278!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00298066804626278!GO:0031072;heat shock protein binding;0.00305523176277478!GO:0005874;microtubule;0.00309046544309015!GO:0051252;regulation of RNA metabolic process;0.00319154819348824!GO:0016301;kinase activity;0.00324980844265254!GO:0006383;transcription from RNA polymerase III promoter;0.00324980844265254!GO:0043284;biopolymer biosynthetic process;0.00325907402110207!GO:0000775;chromosome, pericentric region;0.00327834089479006!GO:0016049;cell growth;0.00336749666979797!GO:0006695;cholesterol biosynthetic process;0.00338769511329286!GO:0017166;vinculin binding;0.00356177498062745!GO:0015631;tubulin binding;0.0037433313677648!GO:0031324;negative regulation of cellular metabolic process;0.00378916234170407!GO:0006401;RNA catabolic process;0.00380278993082237!GO:0003729;mRNA binding;0.00380971344696979!GO:0006289;nucleotide-excision repair;0.00381283761501544!GO:0050662;coenzyme binding;0.00381410350752206!GO:0022890;inorganic cation transmembrane transporter activity;0.0038480710728168!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00402917485567216!GO:0016363;nuclear matrix;0.00416613348300513!GO:0001558;regulation of cell growth;0.00417377849911805!GO:0048487;beta-tubulin binding;0.00460005851022239!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00467880920936322!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00467880920936322!GO:0005684;U2-dependent spliceosome;0.00489854631839174!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00518252809457127!GO:0006402;mRNA catabolic process;0.00533463202029615!GO:0043488;regulation of mRNA stability;0.00550737350877685!GO:0043487;regulation of RNA stability;0.00550737350877685!GO:0032508;DNA duplex unwinding;0.00550737350877685!GO:0032392;DNA geometric change;0.00550737350877685!GO:0044433;cytoplasmic vesicle part;0.0058139186538582!GO:0000082;G1/S transition of mitotic cell cycle;0.00592520341590165!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0060895003917492!GO:0006284;base-excision repair;0.00612259081544097!GO:0008139;nuclear localization sequence binding;0.00623635633906046!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00626765525029701!GO:0005083;small GTPase regulator activity;0.00647560080722335!GO:0006897;endocytosis;0.00648497758911563!GO:0010324;membrane invagination;0.00648497758911563!GO:0006778;porphyrin metabolic process;0.0065220386012596!GO:0033013;tetrapyrrole metabolic process;0.0065220386012596!GO:0005791;rough endoplasmic reticulum;0.00653880400070753!GO:0007088;regulation of mitosis;0.00684876319204661!GO:0030041;actin filament polymerization;0.00715607328922487!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00715607328922487!GO:0015002;heme-copper terminal oxidase activity;0.00715607328922487!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00715607328922487!GO:0004129;cytochrome-c oxidase activity;0.00715607328922487!GO:0004674;protein serine/threonine kinase activity;0.00722209794688797!GO:0006611;protein export from nucleus;0.00727355717223869!GO:0046483;heterocycle metabolic process;0.00788222688716866!GO:0003746;translation elongation factor activity;0.00793721482859362!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00820006812860601!GO:0006268;DNA unwinding during replication;0.00845957853517716!GO:0006352;transcription initiation;0.00849396080869042!GO:0000323;lytic vacuole;0.00856347690564341!GO:0005764;lysosome;0.00856347690564341!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00861943982623399!GO:0016197;endosome transport;0.00862764880199941!GO:0006595;polyamine metabolic process;0.00867465508378976!GO:0035258;steroid hormone receptor binding;0.00870290906745333!GO:0030132;clathrin coat of coated pit;0.00884177806948996!GO:0006520;amino acid metabolic process;0.00884782325070637!GO:0006118;electron transport;0.0090326858126445!GO:0030027;lamellipodium;0.0090326858126445!GO:0007266;Rho protein signal transduction;0.00913710887597103!GO:0015036;disulfide oxidoreductase activity;0.00920428630185017!GO:0008610;lipid biosynthetic process;0.00975318957315097!GO:0006405;RNA export from nucleus;0.0100339970109751!GO:0006509;membrane protein ectodomain proteolysis;0.0102880477432417!GO:0033619;membrane protein proteolysis;0.0102880477432417!GO:0051101;regulation of DNA binding;0.0104882507055305!GO:0006919;caspase activation;0.0105553084254135!GO:0030658;transport vesicle membrane;0.0107779855767104!GO:0046467;membrane lipid biosynthetic process;0.0110724569570795!GO:0051287;NAD binding;0.0114230736572224!GO:0006740;NADPH regeneration;0.0114536541876123!GO:0006098;pentose-phosphate shunt;0.0114536541876123!GO:0009892;negative regulation of metabolic process;0.0114954689456457!GO:0031901;early endosome membrane;0.0118910359571475!GO:0004518;nuclease activity;0.0121162599219307!GO:0000075;cell cycle checkpoint;0.0121260652620134!GO:0003682;chromatin binding;0.0123825176568609!GO:0042168;heme metabolic process;0.0123825176568609!GO:0043281;regulation of caspase activity;0.0125139735596079!GO:0006891;intra-Golgi vesicle-mediated transport;0.0125495195893958!GO:0046474;glycerophospholipid biosynthetic process;0.012698762921269!GO:0008180;signalosome;0.0128065589915429!GO:0045045;secretory pathway;0.012839979745067!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.013492809129902!GO:0007040;lysosome organization and biogenesis;0.0140260025531485!GO:0007050;cell cycle arrest;0.0140941634797271!GO:0003678;DNA helicase activity;0.0141026062906209!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0145278158572786!GO:0005832;chaperonin-containing T-complex;0.0149135401756827!GO:0012506;vesicle membrane;0.0151028885938822!GO:0045941;positive regulation of transcription;0.0155595121519441!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0173349649476344!GO:0016311;dephosphorylation;0.0173491484072646!GO:0030521;androgen receptor signaling pathway;0.0178039455167622!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0178388778562242!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0184519267760863!GO:0005862;muscle thin filament tropomyosin;0.0184749967637002!GO:0006979;response to oxidative stress;0.0186233436578407!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0186991434922006!GO:0004177;aminopeptidase activity;0.0187794536619195!GO:0030133;transport vesicle;0.0190351263810957!GO:0000049;tRNA binding;0.0190925011774206!GO:0006007;glucose catabolic process;0.019330826469089!GO:0005637;nuclear inner membrane;0.0194167915817621!GO:0005869;dynactin complex;0.0196078387505647!GO:0048518;positive regulation of biological process;0.0199276030443263!GO:0000096;sulfur amino acid metabolic process;0.0205532750792022!GO:0007017;microtubule-based process;0.0210857643301787!GO:0030833;regulation of actin filament polymerization;0.0215148427693857!GO:0048660;regulation of smooth muscle cell proliferation;0.0218686031870461!GO:0007346;regulation of progression through mitotic cell cycle;0.0218686031870461!GO:0006310;DNA recombination;0.0219527205140198!GO:0045893;positive regulation of transcription, DNA-dependent;0.0220048824843075!GO:0016584;nucleosome positioning;0.0223492884033468!GO:0030118;clathrin coat;0.0224957090041258!GO:0030660;Golgi-associated vesicle membrane;0.0225725940173119!GO:0004527;exonuclease activity;0.0225725940173119!GO:0003711;transcription elongation regulator activity;0.0228420543306435!GO:0005774;vacuolar membrane;0.0231966159432454!GO:0005092;GDP-dissociation inhibitor activity;0.0231966159432454!GO:0006779;porphyrin biosynthetic process;0.0231966159432454!GO:0033014;tetrapyrrole biosynthetic process;0.0231966159432454!GO:0030176;integral to endoplasmic reticulum membrane;0.0236624716606538!GO:0040008;regulation of growth;0.0242666699584054!GO:0051098;regulation of binding;0.0243973989854795!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0251413003534369!GO:0016791;phosphoric monoester hydrolase activity;0.0252542685270765!GO:0001726;ruffle;0.025567660926194!GO:0008283;cell proliferation;0.0256594986028351!GO:0030134;ER to Golgi transport vesicle;0.0258948478425879!GO:0000209;protein polyubiquitination;0.0259513696672196!GO:0004197;cysteine-type endopeptidase activity;0.026255196871061!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0263785342541776!GO:0000910;cytokinesis;0.0266123884484564!GO:0008022;protein C-terminus binding;0.0266788566441976!GO:0030127;COPII vesicle coat;0.0268705422032952!GO:0012507;ER to Golgi transport vesicle membrane;0.0268705422032952!GO:0006302;double-strand break repair;0.0271617456978388!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0278531838759369!GO:0003756;protein disulfide isomerase activity;0.0283637152668021!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0283637152668021!GO:0006807;nitrogen compound metabolic process;0.0284907538339996!GO:0007021;tubulin folding;0.0284972822217424!GO:0043022;ribosome binding;0.0285673029108144!GO:0043189;H4/H2A histone acetyltransferase complex;0.0294602389341318!GO:0008154;actin polymerization and/or depolymerization;0.0294874550600899!GO:0006144;purine base metabolic process;0.0295033915238267!GO:0042393;histone binding;0.0297249264190698!GO:0009116;nucleoside metabolic process;0.030105057960861!GO:0047485;protein N-terminus binding;0.0302407610395062!GO:0030663;COPI coated vesicle membrane;0.0302701789481188!GO:0030126;COPI vesicle coat;0.0302701789481188!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0310418639883075!GO:0033559;unsaturated fatty acid metabolic process;0.0310648237698136!GO:0006636;unsaturated fatty acid biosynthetic process;0.0310648237698136!GO:0000287;magnesium ion binding;0.0315763330058649!GO:0022408;negative regulation of cell-cell adhesion;0.0318742925466476!GO:0001568;blood vessel development;0.031934822220272!GO:0016272;prefoldin complex;0.0321242240966979!GO:0005657;replication fork;0.0321677023753002!GO:0008538;proteasome activator activity;0.0323568760482822!GO:0006338;chromatin remodeling;0.0324144754927507!GO:0009124;nucleoside monophosphate biosynthetic process;0.0324144754927507!GO:0009123;nucleoside monophosphate metabolic process;0.0324144754927507!GO:0035267;NuA4 histone acetyltransferase complex;0.0324916217278138!GO:0046489;phosphoinositide biosynthetic process;0.0326420874142002!GO:0030137;COPI-coated vesicle;0.0330646504490498!GO:0030145;manganese ion binding;0.0336748805589304!GO:0000178;exosome (RNase complex);0.0340443516559961!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0340443516559961!GO:0010257;NADH dehydrogenase complex assembly;0.0340443516559961!GO:0033108;mitochondrial respiratory chain complex assembly;0.0340443516559961!GO:0046822;regulation of nucleocytoplasmic transport;0.0341953124217519!GO:0009967;positive regulation of signal transduction;0.0343440429644957!GO:0048037;cofactor binding;0.0346167541328974!GO:0016741;transferase activity, transferring one-carbon groups;0.0353149167510011!GO:0005099;Ras GTPase activator activity;0.0353569633249352!GO:0008637;apoptotic mitochondrial changes;0.0354948359205089!GO:0007033;vacuole organization and biogenesis;0.0355362417648316!GO:0031272;regulation of pseudopodium formation;0.0355362417648316!GO:0031269;pseudopodium formation;0.0355362417648316!GO:0031344;regulation of cell projection organization and biogenesis;0.0355362417648316!GO:0031268;pseudopodium organization and biogenesis;0.0355362417648316!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0355362417648316!GO:0031274;positive regulation of pseudopodium formation;0.0355362417648316!GO:0016481;negative regulation of transcription;0.0355362417648316!GO:0031124;mRNA 3'-end processing;0.0361466038912633!GO:0030518;steroid hormone receptor signaling pathway;0.0361623426864223!GO:0000922;spindle pole;0.0363086925440815!GO:0000339;RNA cap binding;0.0363086925440815!GO:0031529;ruffle organization and biogenesis;0.0364403534253574!GO:0035035;histone acetyltransferase binding;0.0371631635480517!GO:0006354;RNA elongation;0.038038196045148!GO:0008168;methyltransferase activity;0.0380843980717533!GO:0050789;regulation of biological process;0.0381329691464981!GO:0031902;late endosome membrane;0.0383772710764422!GO:0006739;NADP metabolic process;0.0384227334582539!GO:0019904;protein domain specific binding;0.0386174189017906!GO:0005784;translocon complex;0.0387188058998583!GO:0048500;signal recognition particle;0.0391616670425155!GO:0044437;vacuolar part;0.0392444983248663!GO:0043280;positive regulation of caspase activity;0.0402145196245651!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0403385925259659!GO:0048468;cell development;0.0403857900391299!GO:0009112;nucleobase metabolic process;0.0405936173344974!GO:0043086;negative regulation of catalytic activity;0.0406003989421812!GO:0046426;negative regulation of JAK-STAT cascade;0.0407780416159551!GO:0051539;4 iron, 4 sulfur cluster binding;0.040884942938591!GO:0051540;metal cluster binding;0.040896235749532!GO:0051536;iron-sulfur cluster binding;0.040896235749532!GO:0045792;negative regulation of cell size;0.040896235749532!GO:0016408;C-acyltransferase activity;0.0410257242261044!GO:0008312;7S RNA binding;0.0410257242261044!GO:0006519;amino acid and derivative metabolic process;0.0417204571053042!GO:0030911;TPR domain binding;0.041756512335659!GO:0006783;heme biosynthetic process;0.0418406283966314!GO:0022415;viral reproductive process;0.0419284436096636!GO:0046519;sphingoid metabolic process;0.0421993504022878!GO:0050178;phenylpyruvate tautomerase activity;0.0421993504022878!GO:0000118;histone deacetylase complex;0.0424089112019374!GO:0043433;negative regulation of transcription factor activity;0.0424771088920826!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0425070859888712!GO:0030433;ER-associated protein catabolic process;0.0434930158921997!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0434930158921997!GO:0019206;nucleoside kinase activity;0.0442776770455574!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0442776770455574!GO:0048659;smooth muscle cell proliferation;0.044997038058907!GO:0006892;post-Golgi vesicle-mediated transport;0.0454551188532702!GO:0004003;ATP-dependent DNA helicase activity;0.0454551188532702!GO:0009966;regulation of signal transduction;0.0456306352983691!GO:0001944;vasculature development;0.0456306352983691!GO:0008017;microtubule binding;0.0457735175592535!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0458679151049371!GO:0005652;nuclear lamina;0.045971842398024!GO:0043414;biopolymer methylation;0.045971842398024!GO:0033673;negative regulation of kinase activity;0.0463013037877939!GO:0006469;negative regulation of protein kinase activity;0.0463013037877939!GO:0030308;negative regulation of cell growth;0.0463947925357777!GO:0005680;anaphase-promoting complex;0.0470184433207306!GO:0042987;amyloid precursor protein catabolic process;0.0477560010434589!GO:0000123;histone acetyltransferase complex;0.0483618553289004!GO:0009303;rRNA transcription;0.0488867754770993
|sample_id=11267
|sample_note=Originally library704 tailing failed, these samples are now being remade in Automation6
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=vein
|top_motifs=SOX{8,9,10}:2.19434746929;POU2F1..3:1.66698098654;GATA6:1.35337684255;SOX2:1.31092441609;LEF1_TCF7_TCF7L1,2:1.08882063779;RXR{A,B,G}:1.05125572633;GTF2A1,2:1.00070713497;PAX1,9:0.99448885607;AR:0.967815038334;SOX17:0.962599954548;TFAP2{A,C}:0.954931982069;TFDP1:0.925524621807;PBX1:0.884402409163;TLX1..3_NFIC{dimer}:0.876239676763;FOX{I1,J2}:0.866219329356;ALX1:0.843382730059;XCPE1{core}:0.783143526315;EN1,2:0.773179680076;ETS1,2:0.747761648706;TBP:0.676034264889;HES1:0.639312777668;NR5A1,2:0.631832801499;TFAP4:0.626842837265;PPARG:0.604770183225;PAX6:0.57844853508;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.549995899334;NFE2:0.546291605259;BACH2:0.545632792987;GFI1B:0.530673713762;PAX8:0.528368978725;NFATC1..3:0.525767664782;NKX2-3_NKX2-5:0.521031980674;RORA:0.513894949311;GFI1:0.502305777704;HAND1,2:0.498105825793;SPIB:0.469798439954;STAT5{A,B}:0.468678192228;LHX3,4:0.465356740329;NANOG:0.461634749203;MYB:0.430686543204;ZNF423:0.420805217796;ELF1,2,4:0.41932818206;TP53:0.419279772861;HOX{A5,B5}:0.417912645889;bHLH_family:0.413850727151;HBP1_HMGB_SSRP1_UBTF:0.407676890466;NR3C1:0.403555935199;HIC1:0.391813153516;NANOG{mouse}:0.38980017791;IKZF1:0.350560719469;FOS_FOS{B,L1}_JUN{B,D}:0.345126172192;POU1F1:0.339930583494;IKZF2:0.336065114753;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.332680976037;NFY{A,B,C}:0.31842629062;SOX5:0.31818895919;ONECUT1,2:0.312444959023;GLI1..3:0.296595324626;E2F1..5:0.268291329301;REST:0.259277565014;GZF1:0.246490015003;ZNF238:0.240384062392;ZNF148:0.191085293753;TEAD1:0.181102373456;PAX5:0.172827737642;FOSL2:0.140543553282;ZFP161:0.119328327032;FOXQ1:0.0958034700389;HNF4A_NR2F1,2:0.0854232001431;TFAP2B:0.0791282960851;CRX:0.076388645473;ADNP_IRX_SIX_ZHX:0.0471133279234;NFE2L2:0.0296549339869;ZNF143:0.0118552544261;MEF2{A,B,C,D}:-0.0129070973332;ESRRA:-0.0519037182121;MYOD1:-0.0527595512201;POU6F1:-0.0543881309591;OCT4_SOX2{dimer}:-0.0657256983462;SPZ1:-0.0719581229924;TAL1_TCF{3,4,12}:-0.0738954732805;SP1:-0.0823291933098;SRF:-0.0825803333686;LMO2:-0.08411365792;POU3F1..4:-0.0847411557128;YY1:-0.100688205872;NRF1:-0.119398450533;PRRX1,2:-0.148100856858;CUX2:-0.155172736155;NFE2L1:-0.155701658051;PAX3,7:-0.157237355538;ATF2:-0.158929330214;TFCP2:-0.182295213645;SPI1:-0.184274106223;GCM1,2:-0.185194897639;STAT2,4,6:-0.185887888065;HNF1A:-0.199643910025;FOXA2:-0.219173981792;ARID5B:-0.236570111123;NHLH1,2:-0.258238775483;PAX2:-0.260444544583;FOXL1:-0.266682436666;GTF2I:-0.28176530071;MTF1:-0.285956106975;CREB1:-0.302250055777;EGR1..3:-0.323386695719;MED-1{core}:-0.345400860837;ATF6:-0.350802802756;NFKB1_REL_RELA:-0.369549092784;PITX1..3:-0.393232132554;CDC5L:-0.402359157669;RUNX1..3:-0.427915349679;XBP1:-0.436611916004;HOXA9_MEIS1:-0.441656619597;PAX4:-0.449011178276;VSX1,2:-0.454212660523;MTE{core}:-0.455709392698;JUN:-0.456950180048;SMAD1..7,9:-0.457260741019;HLF:-0.466982298282;BREu{core}:-0.476412621489;CEBPA,B_DDIT3:-0.500403584999;ZBTB6:-0.504330393436;RFX1:-0.509096802873;PATZ1:-0.519833015399;FOX{F1,F2,J1}:-0.547720847362;PDX1:-0.552581942413;MZF1:-0.553356089761;HIF1A:-0.566024456098;ZIC1..3:-0.573408958211;FOXM1:-0.580442728323;EBF1:-0.585178726923;MAZ:-0.611422078832;HMX1:-0.635404988199;UFEwm:-0.651846556167;T:-0.652349304889;NFIL3:-0.670476779138;ATF4:-0.671316103918;SREBF1,2:-0.676695446058;AIRE:-0.690334443898;POU5F1:-0.696423604527;GATA4:-0.700287668756;KLF4:-0.703815094792;RREB1:-0.708658432013;HSF1,2:-0.741114626654;FOXN1:-0.743852915264;SNAI1..3:-0.74798080136;TOPORS:-0.755028308757;ESR1:-0.757037392616;NR1H4:-0.777877774077;TGIF1:-0.790619518793;NFIX:-0.791300928962;STAT1,3:-0.812378034685;DMAP1_NCOR{1,2}_SMARC:-0.819919470323;TEF:-0.822461025251;RBPJ:-0.826895537437;ATF5_CREB3:-0.842845791916;ELK1,4_GABP{A,B1}:-0.848570658146;NKX3-2:-0.864527637276;ZEB1:-0.86696333002;FOXP3:-0.892650072048;MAFB:-0.899257198853;DBP:-0.944048093322;RXRA_VDR{dimer}:-0.948121983644;PRDM1:-1.00667358723;ZBTB16:-1.01102261139;MYFfamily:-1.02355859221;IRF1,2:-1.0681797258;AHR_ARNT_ARNT2:-1.06888772657;MYBL2:-1.07271170896;FOXD3:-1.08399542624;FOX{D1,D2}:-1.10447342413;BPTF:-1.11111132355;RFX2..5_RFXANK_RFXAP:-1.13926713874;IRF7:-1.17409246837;ALX4:-1.21316613846;EP300:-1.23899100483;HOX{A6,A7,B6,B7}:-1.25929367512;TBX4,5:-1.28443967898;NKX2-2,8:-1.29648659682;NR6A1:-1.29748003004;TLX2:-1.34081931572;EVI1:-1.34385172878;ZNF384:-1.41954266528;HOX{A4,D4}:-1.42208329043;NKX3-1:-1.54418902119;HMGA1,2:-1.54994963253;FOXO1,3,4:-1.56073137673;FOXP1:-1.76488198048;NKX2-1,4:-1.77543496566;NKX6-1,2:-1.80453115765;CDX1,2,4:-1.96053242206
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11267-116G7;search_select_hide=table117:FF:11267-116G7
}}
}}

Latest revision as of 16:29, 3 June 2020

Name:Endothelial Cells - Vein, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12497
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuevein
dev stageinfant
sexmale
ageNeonatal
cell typeblood vessel endothelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1684
catalog numberCA200-R10n
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004785
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12497 CAGE DRX008234 DRR009106
Accession ID Hg19

Library idBAMCTSS
CNhs12497 DRZ000531 DRZ001916
Accession ID Hg38

Library idBAMCTSS
CNhs12497 DRZ011881 DRZ013266
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004785
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.TGACCA sRNA-Seq DRX037130 DRR041496
Accession ID Hg19

Library idBAMCTSS
SRhi10009.TGACCA DRZ007138


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.283
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.105
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.325
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.281
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.266
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.347
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.653
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.771
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus1.324
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.178
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.455
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.404
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.404
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12497

Jaspar motifP-value
MA0002.20.401
MA0003.10.313
MA0004.10.0634
MA0006.10.281
MA0007.10.00168
MA0009.10.307
MA0014.10.551
MA0017.10.259
MA0018.20.0653
MA0019.10.119
MA0024.10.66
MA0025.10.742
MA0027.10.574
MA0028.10.593
MA0029.10.444
MA0030.10.482
MA0031.10.102
MA0035.23.01402e-4
MA0038.10.00656
MA0039.20.16
MA0040.10.43
MA0041.10.249
MA0042.10.533
MA0043.10.0253
MA0046.10.145
MA0047.20.753
MA0048.10.033
MA0050.12.28453e-6
MA0051.10.00646
MA0052.10.472
MA0055.11.83838e-4
MA0057.10.334
MA0058.10.13
MA0059.10.0533
MA0060.18.40453e-7
MA0061.10.503
MA0062.20.447
MA0065.20.106
MA0066.10.376
MA0067.10.478
MA0068.10.0383
MA0069.10.0179
MA0070.10.561
MA0071.10.177
MA0072.10.131
MA0073.10.262
MA0074.10.513
MA0076.10.0459
MA0077.14.60209e-4
MA0078.10.0098
MA0079.20.515
MA0080.29.47403e-4
MA0081.10.213
MA0083.10.0535
MA0084.10.696
MA0087.10.427
MA0088.10.179
MA0090.10.261
MA0091.10.751
MA0092.10.744
MA0093.10.0862
MA0099.27.51307e-18
MA0100.10.93
MA0101.10.897
MA0102.22.13324e-4
MA0103.10.0373
MA0104.20.409
MA0105.10.486
MA0106.18.5011e-4
MA0107.10.981
MA0108.22.47542e-6
MA0111.10.281
MA0112.20.541
MA0113.10.492
MA0114.10.467
MA0115.10.714
MA0116.10.718
MA0117.10.748
MA0119.10.141
MA0122.10.0893
MA0124.10.421
MA0125.10.749
MA0131.10.855
MA0135.10.0642
MA0136.10.0142
MA0137.20.142
MA0138.20.982
MA0139.10.48
MA0140.11.27605e-4
MA0141.10.0769
MA0142.10.0377
MA0143.10.925
MA0144.10.904
MA0145.10.159
MA0146.10.482
MA0147.10.115
MA0148.10.477
MA0149.10.0347
MA0150.10.00298
MA0152.10.742
MA0153.10.68
MA0154.10.819
MA0155.10.127
MA0156.10.00758
MA0157.10.63
MA0159.10.938
MA0160.10.253
MA0162.10.074
MA0163.10.309
MA0164.10.409
MA0258.10.381
MA0259.10.255



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12497

Novel motifP-value
10.916
100.323
1000.169
1010.15
1020.619
1030.991
1040.717
1050.548
1060.837
1070.221
1080.895
1090.0281
110.119
1100.0232
1110.711
1120.252
1130.485
1140.57
1150.919
1160.799
1170.3
1180.894
1190.669
120.073
1200.0446
1210.997
1220.522
1230.0147
1240.419
1250.615
1260.422
1270.512
1280.921
1290.597
130.153
1300.105
1310.551
1320.479
1330.33
1340.535
1350.188
1360.129
1370.294
1380.913
1390.661
140.532
1400.435
1410.627
1420.978
1430.156
1440.213
1450.238
1460.0974
1470.185
1480.135
1490.391
150.725
1500.053
1510.841
1520.103
1530.1
1540.0926
1550.926
1560.439
1570.369
1580.451
1590.819
160.946
1600.0952
1610.411
1620.737
1630.383
1640.866
1650.658
1660.0973
1670.374
1680.721
1690.12
170.048
180.826
190.817
20.993
200.664
210.169
220.155
230.901
240.903
250.551
260.519
270.651
280.0131
290.797
30.933
300.859
310.933
320.211
330.242
340.032
350.936
360.048
370.456
380.208
390.879
40.214
400.00905
410.0696
420.537
430.846
440.0639
450.313
460.432
470.511
480.0702
490.965
50.753
500.971
510.752
520.661
530.218
540.788
550.237
560.914
570.205
580.0651
590.207
60.52
600.963
610.901
620.284
630.823
640.726
650.61
660.0229
670.948
680.507
690.748
70.336
700.655
710.925
720.294
730.00195
740.617
750.491
760.453
770.524
780.901
790.595
80.0298
800.485
810.405
820.108
830.601
840.43
850.227
860.598
870.0417
880.942
890.965
90.146
900.195
910.193
920.676
930.672
940.627
950.0233
960.235
970.604
980.106
990.133



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12497


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
0002543 (vein endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001638 (vein)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0000487 (simple squamous epithelium)
0003920 (venous blood vessel)
0004638 (blood vessel endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0004535 (cardiovascular system)
0004537 (blood vasculature)
0004582 (venous system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000052 (human endothelial cell of the vein sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)

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