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{{f5samples
{{f5samples
|id=FF:10784-110H1
|DRA_sample_Accession=CAGE@SAMD00005895
|name=mucinous cystadenocarcinoma  cell line:MCAS
|accession_numbers=CAGE;DRX007954;DRR008826;DRZ000251;DRZ001636;DRZ011601;DRZ012986
|sample_id=10784
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0003134,UBERON:0000344,UBERON:0005156,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_tube_id=110H1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|rna_box=110
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:299,DOID:3111,DOID:3603
|rna_position=H1
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167,FF:0100977,FF:0100811,FF:0104883
|sample_cell_lot=
|comment=
|sample_cell_catalog=jcrb0240
|created_by=
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.23!168.84!EHF;;chr6:1312325..1312340,+!p1@FOXQ1!2.08!188.07!FOXQ1;;chr11:61520075..61520136,+!p1@C11orf9!1.92!168.20!C11orf9;;chr6:34204921..34204939,+!p3@HMGA1!1.68!1336.97!HMGA1;;chr3:111314186..111314204,-!p1@ZBED2!1.59!38.04!ZBED2;;chr17:46675558..46675577,-!p2@HOXB6!1.58!37.19!HOXB6;;chr6:10415484..10415508,-!p3@TFAP2A!1.55!34.23!TFAP2A;;chr8:55370487..55370503,+!p1@SOX17!1.54!33.60!SOX17;;chr20:50159198..50159299,-!p1@NFATC2!1.53!47.12!NFATC2;;chr6:10415276..10415341,-!p2@TFAP2A!1.49!36.13!TFAP2A;;chr17:46682321..46682362,-!p1@HOXB6!1.48!29.16!HOXB6;;chr1:201979703..201979721,+!p2@ELF3!1.42!25.15!ELF3;;chr1:201979743..201979762,+!p1@ELF3!1.38!23.24!ELF3;;chr7:97840743..97840786,+!p1@BHLHA15!1.37!22.40!BHLHA15;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.13!ZBED1;;chr11:34642656..34642667,+!p2@EHF!1.31!19.44!EHF;;chr6:34204672..34204692,+!p1@HMGA1!1.30!2044.23!HMGA1;;chr13:73633131..73633149,+!p1@KLF5!1.29!194.41!KLF5;;chr1:209979467..209979494,-!p1@IRF6!1.29!20.71!IRF6;;chr5:2751762..2751784,-!p1@IRX2!1.29!18.60!IRX2;;chr17:46687959..46688007,-!p2@HOXB7!1.27!24.30!HOXB7;;chr8:102504651..102504683,+!p1@GRHL2!1.27!17.75!GRHL2;;chr14:75988771..75988826,+!p1@BATF!1.26!22.61!BATF;;chr17:46622229..46622257,-!p6@HOXB2!1.25!19.65!HOXB2;;chr5:72744594..72744609,-!p1@FOXD1!1.22!71.21!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!1.22!18.17!HOXB2;;chr20:22564895..22564910,-!p1@FOXA2!1.22!15.64!FOXA2;;chr21:36421535..36421610,-!p2@RUNX1!1.21!53.25!RUNX1;;chr17:46622440..46622477,-!p5@HOXB2!1.21!16.90!HOXB2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.21!15.21!TFCP2L1;;chr12:27485762..27485776,+!p3@ARNTL2!1.20!39.30!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!1.19!55.79!FOSL1;;chr5:134369905..134369972,-!p1@PITX1!1.19!22.19!PITX1;;chr1:37945588..37945604,+!p3@ZC3H12A!1.18!14.16!ZC3H12A;;chr11:65686732..65686756,+!p2@DRAP1!1.17!58.32!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!1.17!24.09!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!1.11!13.52!PPARG;;chr12:77459306..77459365,-!p1@E2F7!1.10!143.90!E2F7;;chr11:65667846..65667868,-!p1@FOSL1!1.06!276.61!FOSL1;;chr12:27485823..27485868,+!p2@ARNTL2!1.06!43.11!ARNTL2;;chr18:19749541..19749557,+!p1@GATA6!1.06!33.18!GATA6;;chr5:72744445..72744466,-!p2@FOXD1!1.06!17.75!FOXD1;;chr15:67418047..67418093,+!p4@SMAD3!1.05!12.89!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.03!HMGA2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.04!12.47!L3MBTL4;;chr3:12329358..12329393,+!p3@PPARG!1.03!24.30!PPARG;;chr2:70142232..70142251,+!p1@MXD1!1.01!53.67!MXD1;;chr15:67418119..67418162,+!p5@SMAD3!1.00!10.14!SMAD3;;chr3:69915385..69915438,+!p3@MITF!1.00!9.09!MITF;;chr5:50679228..50679288,+!p1@ISL1!1.00!9.09!ISL1;;chr6:10419768..10419819,-!p6@TFAP2A!1.00!9.09!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.99!41.42!HMGA2;;chr11:34645791..34645836,+!p3@EHF!0.99!8.66!EHF;;chr5:134369879..134369898,-!p2@PITX1!0.99!8.66!PITX1;;chr2:101436564..101436647,+!p1@NPAS2!0.98!176.87!NPAS2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.98!76.92!PPP1R13L;;chr12:80084737..80084763,-!p3@PAWR!0.98!33.18!PAWR;;chr14:38064429..38064486,-!p1@FOXA1!0.95!7.82!FOXA1;;chr12:27485785..27485816,+!p1@ARNTL2!0.92!52.41!ARNTL2;;chr6:10412600..10412637,-!p1@TFAP2A!0.92!12.47!TFAP2A;;chr21:38071430..38071456,+!p1@SIM2!0.92!7.40!SIM2;;chr17:7493405..7493419,-!p1@SOX15!0.92!7.40!SOX15;;chr12:66218255..66218304,+!p3@HMGA2!0.91!20.07!HMGA2;;chr6:34524049..34524089,-!p2@SPDEF!0.91!7.18!SPDEF;;chr17:46703212..46703238,-!p2@HOXB9!0.91!7.18!HOXB9;;chr19:1753498..1753519,+!p1@ONECUT3!0.91!7.18!ONECUT3;;chr17:70117153..70117174,+!p1@SOX9!0.90!74.38!SOX9;;chr17:46621146..46621180,-!p10@HOXB2!0.89!6.76!HOXB2;;chr17:46690839..46690884,-!p1@HOXB8!0.89!6.76!HOXB8;;chr17:46687935..46687950,-!p3@HOXB7!0.88!6.55!HOXB7;;chr20:49547691..49547724,-!p2@ADNP!0.87!42.05!ADNP;;chr17:46675469..46675481,-!p4@HOXB6!0.87!6.34!HOXB6;;chr17:46691732..46691766,-!p4@HOXB8!0.87!6.34!HOXB8;;chr3:111314230..111314241,-!p2@ZBED2!0.87!6.34!ZBED2;;chr17:41623692..41623715,-!p1@ETV4!0.86!28.10!ETV4;;chr17:46692457..46692484,-!p2@HOXB8!0.85!6.13!HOXB8;;chr3:181429704..181429722,+!p1@SOX2!0.85!6.13!SOX2;;chr3:24536253..24536328,-!p1@THRB!0.84!11.62!THRB;;chr10:48355030..48355090,+!p1@ZNF488!0.84!7.82!ZNF488;;chr20:22565185..22565223,-!p3@FOXA2!0.84!5.92!FOXA2;;chr7:101917447..101917479,+!p4@CUX1!0.84!5.92!CUX1;;chr7:101917482..101917507,+!p6@CUX1!0.84!5.92!CUX1;;chr16:52581025..52581072,-!p1@TOX3!0.83!5.71!TOX3;;chr6:168227552..168227609,+!p1@MLLT4!0.81!48.18!MLLT4;;chr19:33865009..33865090,+!p3@CEBPG!0.81!7.40!CEBPG;;chr15:96869511..96869525,+!p16@NR2F2!0.81!6.13!NR2F2;;chr11:65554528..65554546,+!p1@OVOL1!0.81!5.49!OVOL1;;chr6:34210478..34210481,+!p8@HMGA1!0.81!5.49!HMGA1;;chr20:22565370..22565388,-!p2@FOXA2!0.81!5.49!FOXA2;;chr14:75988831..75988847,+!p2@BATF!0.80!5.28!BATF;;chr11:65554563..65554576,+!p2@OVOL1!0.80!5.28!OVOL1;;chr10:114710098..114710130,+!p2@TCF7L2!0.79!42.26!TCF7L2;;chr17:46621937..46621966,-!p2@HOXB2!0.79!14.79!HOXB2;;chr9:110250697..110250738,-!p2@KLF4!0.79!6.13!KLF4;;chr3:12329397..12329433,+!p2@PPARG!0.78!12.04!PPARG;;chr1:204042233..204042249,+!p1@SOX13!0.77!33.60!SOX13;;chr2:46524897..46524911,+!p2@EPAS1!0.77!14.58!EPAS1;;chr17:46621101..46621143,-!p7@HOXB2!0.77!6.76!HOXB2;;chr11:65686776..65686787,+!p9@DRAP1!0.77!5.92!DRAP1;;chr17:46675420..46675465,-!p3@HOXB6!0.77!5.71!HOXB6;;chr1:6479968..6479986,-!p1@HES2!0.77!4.86!HES2;;chr6:34524093..34524135,-!p1@SPDEF!0.77!4.86!SPDEF;;chr6:34205372..34205412,+!p5@HMGA1!0.76!26.41!HMGA1;;chr12:66218212..66218244,+!p5@HMGA2!0.76!7.18!HMGA2;;chr3:185826855..185826911,-!p1@ETV5!0.75!139.89!ETV5;;chr2:238600933..238600985,+!p3@LRRFIP1!0.74!27.05!LRRFIP1;;chr5:43120995..43121052,+!p1@ZNF131!0.74!25.36!ZNF131;;chr18:19749517..19749531,+!p3@GATA6!0.74!8.45!GATA6;;chr17:35294075..35294102,+!p1@ENST00000559335!0.74!4.44!LHX1;;chr3:69915369..69915381,+!p4@MITF!0.74!4.44!MITF;;chr12:54380404..54380433,+!p3@HOXC10!0.74!4.44!HOXC10;;chr13:45010939..45011033,-!p1@TSC22D1!0.72!313.16!TSC22D1;;chr17:41277372..41277418,-!p1@BRCA1!0.72!17.12!BRCA1;;chr15:67418099..67418118,+!p16@SMAD3!0.72!4.23!SMAD3;;chr6:10413188..10413249,-!p7@TFAP2A!0.72!4.23!TFAP2A;;chr3:12329339..12329356,+!p5@PPARG!0.72!4.23!PPARG;;chr19:33864571..33864596,+!p2@CEBPG!0.70!10.78!CEBPG;;chr8:67525443..67525459,-!p2@MYBL1!0.70!6.34!MYBL1;;chr12:66218003..66218018,+!p9@HMGA2!0.70!5.07!HMGA2;;chr6:10415263..10415274,-!p8@TFAP2A!0.70!4.01!TFAP2A;;chr8:11561684..11561751,+!p1@GATA4!0.70!4.01!GATA4;;chr17:46675539..46675551,-!p7@HOXB6!0.70!4.01!HOXB6;;chr9:132427972..132428056,+!p1@PRRX2!0.69!5.28!PRRX2;;chr16:2059754..2059777,-!p2@ZNF598!0.68!14.79!ZNF598;;chr17:46692318..46692362,-!p5@HOXB8!0.68!3.80!HOXB8;;chr10:135122906..135122921,+!p4@ZNF511!0.68!3.80!ZNF511;;chr12:54366975..54367001,+!p1@HOXC11!0.68!3.80!HOXC11;;chr10:114709999..114710031,+!p1@TCF7L2!0.67!102.28!TCF7L2;;chr6:34204973..34204990,+!p4@HMGA1!0.67!56.84!HMGA1;;chr4:4291837..4291859,-!p2@LYAR!0.66!13.31!LYAR;;chr12:27485889..27485900,+!p4@ARNTL2!0.66!4.44!ARNTL2;;chr6:10419824..10419840,-!p9@TFAP2A!0.66!3.59!TFAP2A;;chr20:49547593..49547611,-!p3@ADNP!0.65!12.89!ADNP;;chr1:935398..935465,-!p2@HES4!0.64!7.61!HES4;;chr5:2751785..2751808,-!p2@IRX2!0.64!3.38!IRX2;;chr6:28048343..28048354,+!p1@ZNF165!0.64!3.38!ZNF165;;chr7:27153454..27153469,-!p2@HOXA3!0.64!3.38!HOXA3;;chr3:69811858..69811881,+!p5@MITF!0.64!3.38!MITF;;chr17:46622175..46622186,-!p12@HOXB2!0.64!3.38!HOXB2;;chr17:46703528..46703549,-!p5@HOXB9!0.64!3.38!HOXB9;;chr9:110252035..110252057,-!p1@KLF4!0.63!61.49!KLF4;;chr20:42295745..42295765,+!p1@MYBL2!0.62!62.34!MYBL2;;chrX:48900782..48900793,-!p3@TFE3!0.62!6.55!TFE3;;chr2:121493492..121493537,+!p2@GLI2!0.62!5.71!GLI2;;chr17:46675619..46675642,-!p5@HOXB6!0.62!3.17!HOXB6;;chr17:46703687..46703740,-!p1@HOXB9!0.62!3.17!HOXB9;;chr20:49547731..49547753,-!p4@ADNP!0.61!8.88!ADNP;;chr3:101568349..101568365,+!p1@NFKBIZ!0.60!190.60!NFKBIZ;;chr20:49547910..49547988,-!p1@ADNP!0.60!135.45!ADNP;;chr7:86781916..86781963,+!p2@DMTF1!0.60!15.21!DMTF1;;chr5:178157651..178157689,-!p1@ZNF354A!0.60!14.58!ZNF354A;;chr6:1312155..1312187,+!p2@FOXQ1!0.60!2.96!FOXQ1;;chr8:102504690..102504704,+!p3@GRHL2!0.60!2.96!GRHL2;;chr17:46126136..46126152,+!p1@NFE2L1!0.59!183.00!NFE2L1;;chr7:99156249..99156311,+!p1@ZNF655!0.59!79.24!ZNF655;;chr10:43134001..43134026,-!p1@ZNF33B!0.59!15.43!ZNF33B;;chr19:19729477..19729542,-!p1@PBX4!0.59!6.97!PBX4;;chr3:185826814..185826825,-!p3@ETV5!0.59!5.92!ETV5;;chr17:46622114..46622138,-!p4@HOXB2!0.59!4.86!HOXB2;;chr21:36260980..36261011,-!p1@RUNX1!0.58!100.16!RUNX1;;chr19:4065485..4065546,-!p2@ZBTB7A!0.58!30.64!ZBTB7A;;chr17:46622070..46622109,-!p1@HOXB2!0.58!7.18!HOXB2;;chr10:8095593..8095625,+!p3@GATA3!0.58!3.38!GATA3;;chr5:34929677..34929789,+!p1@DNAJC21!0.57!97.63!DNAJC21;;chr4:38665810..38665827,+!p1@KLF3!0.57!48.60!KLF3;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.57!15.00!TAL1;;chr12:51566562..51566584,-!p2@TFCP2!0.57!8.88!TFCP2;;chr9:110251836..110251887,-!p4@KLF4!0.57!3.80!KLF4;;chr17:41623667..41623682,-!p8@ETV4!0.57!2.96!ETV4;;chr1:209979411..209979433,-!p2@IRF6!0.57!2.75!IRF6;;chr2:113994526..113994556,-!p3@PAX8!0.57!2.75!PAX8;;chr4:149363475..149363492,-!p2@NR3C2!0.57!2.75!NR3C2;;chr1:212782094..212782109,+!p1@ATF3!0.56!90.86!ATF3;;chr17:17740287..17740307,-!p1@SREBF1!0.56!86.85!SREBF1;;chr17:38256822..38256851,-!p1@NR1D1!0.56!25.78!NR1D1;;chr12:80084768..80084821,-!p2@PAWR!0.56!22.40!PAWR;;chr20:42295713..42295738,+!p2@MYBL2!0.56!19.02!MYBL2;;chr6:15246200..15246214,+!p2@JARID2!0.56!8.66!JARID2;;chr2:200322654..200322707,-!p2@SATB2!0.56!4.23!SATB2;;chr17:36861393..36861439,+!p2@MLLT6!0.55!18.81!MLLT6;;chr6:126102292..126102329,+!p3@NCOA7!0.55!10.14!NCOA7;;chr1:158979872..158979898,+!p3@IFI16!0.55!9.51!IFI16;;chr10:114711019..114711041,+!p7@TCF7L2!0.55!4.23!TCF7L2;;chr6:34524025..34524045,-!p3@SPDEF!0.55!2.54!SPDEF;;chr15:67418177..67418204,+!p9@SMAD3!0.55!2.54!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.55!2.54!ETV4;;chr17:4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|sample_dev_stage=
|ffid_belonging_in_development=UBERON:0009117,UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316
|sample_tissue=ovary
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=unknown
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=1.85
|rna_od260/280=2.04
|sample_cell_type=unclassifiable
|sample_cell_line=MCAS
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=mucinous cystadenocarcinoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=27.71307
|rna_concentration=1.02641
|sample_note=
|profile_hcage=CNhs11873,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000344,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000474,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0000992,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003100,UBERON:0003133,UBERON:0003134,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0004923,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0009117,UBERON:0009196
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:299,DOID:305,DOID:3111,DOID:3603,DOID:4
|sample_description=
|fonse_cell_line=FF:0100977,FF:0101120
|fonse_cell_line=FF:0100977,FF:0101120
|fonse_cell_line_closure=FF:0100977,FF:0101120
|fonse_cell_line_closure=FF:0100977,FF:0101120
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mucinous%2520cystadenocarcinoma%2520cell%2520line%253aMCAS.CNhs11873.10784-110H1.hg38.nobarcode.ctss.bed.gz
|id=FF:10784-110H1
|is_a=DOID:3603;;EFO:0002091;;FF:0000210;;FF:0104883;;UBERON:0000344
|is_obsolete=
|library_id=CNhs11873
|library_id_phase_based=2:CNhs11873
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10784
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10784
|name=mucinous cystadenocarcinoma cell line:MCAS
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11873,LSID830,release010,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=110
|rna_catalog_number=
|rna_concentration=1.02641
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.85
|rna_od260/280=2.04
|rna_position=H1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=110H1
|rna_weight_ug=27.71307
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=jcrb0240
|sample_cell_line=MCAS
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
|sample_dev_stage=
|sample_disease=mucinous cystadenocarcinoma
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.89045831217446e-227!GO:0005737;cytoplasm;5.11865393573225e-186!GO:0043226;organelle;3.0214846173048e-179!GO:0043229;intracellular organelle;9.42188771636654e-179!GO:0043231;intracellular membrane-bound organelle;6.83722018482867e-171!GO:0043227;membrane-bound organelle;1.00775930908665e-170!GO:0044422;organelle part;4.4824626781455e-150!GO:0044446;intracellular organelle part;1.31091474029606e-148!GO:0044444;cytoplasmic part;3.24795624135561e-121!GO:0032991;macromolecular complex;1.31698004602833e-99!GO:0030529;ribonucleoprotein complex;1.68537619100028e-82!GO:0005515;protein binding;7.18092470887916e-81!GO:0044237;cellular metabolic process;1.93890857626004e-79!GO:0044238;primary metabolic process;1.48063231650062e-78!GO:0043170;macromolecule metabolic process;1.35494808753674e-74!GO:0044428;nuclear part;2.93910793248333e-74!GO:0043233;organelle lumen;1.58943517060439e-69!GO:0031974;membrane-enclosed lumen;1.58943517060439e-69!GO:0003723;RNA binding;2.642629764798e-69!GO:0005634;nucleus;1.8885161957551e-67!GO:0005739;mitochondrion;2.70814003568839e-63!GO:0019538;protein metabolic process;1.86683452106173e-59!GO:0006412;translation;2.15802303468888e-54!GO:0044267;cellular protein metabolic process;2.95846693449724e-54!GO:0044260;cellular macromolecule metabolic process;4.13633626061193e-53!GO:0005840;ribosome;7.43366298328446e-52!GO:0016043;cellular component organization and biogenesis;8.91104950198667e-52!GO:0043234;protein complex;3.62137357623157e-51!GO:0031090;organelle membrane;8.44480855592121e-50!GO:0006396;RNA processing;7.11955423201273e-48!GO:0015031;protein transport;4.88367979805632e-46!GO:0033036;macromolecule localization;5.45036096387758e-46!GO:0003735;structural constituent of ribosome;3.0144386495161e-45!GO:0031981;nuclear lumen;9.57337010685655e-45!GO:0043228;non-membrane-bound organelle;4.9328735896394e-44!GO:0043232;intracellular non-membrane-bound organelle;4.9328735896394e-44!GO:0009059;macromolecule biosynthetic process;1.0186486218099e-42!GO:0045184;establishment of protein localization;7.55130101456205e-42!GO:0008104;protein localization;1.05092215251785e-41!GO:0043283;biopolymer metabolic process;3.22468576707686e-41!GO:0009058;biosynthetic process;5.52762835763057e-41!GO:0044429;mitochondrial part;8.04800155881516e-41!GO:0044249;cellular biosynthetic process;4.36430082092783e-40!GO:0031967;organelle envelope;8.83269125736857e-40!GO:0031975;envelope;2.05802677457548e-39!GO:0046907;intracellular transport;1.90903585095669e-38!GO:0033279;ribosomal subunit;2.57521229127148e-38!GO:0016071;mRNA metabolic process;2.7471805039949e-38!GO:0005829;cytosol;6.81660630337968e-38!GO:0006996;organelle organization and biogenesis;4.01415370641312e-37!GO:0006259;DNA metabolic process;1.55814262185192e-33!GO:0065003;macromolecular complex assembly;7.21164019108457e-33!GO:0006397;mRNA processing;1.08813912182354e-32!GO:0008380;RNA splicing;2.3836376313732e-32!GO:0006886;intracellular protein transport;3.84504729431159e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.95820392487362e-31!GO:0007049;cell cycle;2.00832480229367e-30!GO:0010467;gene expression;6.4588395285701e-30!GO:0022607;cellular component assembly;6.31720438783567e-29!GO:0000166;nucleotide binding;6.93093534406282e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1934120715479e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.72610123925108e-28!GO:0005654;nucleoplasm;3.11523959848339e-27!GO:0051649;establishment of cellular localization;5.45992804084657e-26!GO:0005740;mitochondrial envelope;1.22852434252643e-25!GO:0051641;cellular localization;2.06456091534629e-25!GO:0031966;mitochondrial membrane;2.96490485252155e-24!GO:0019866;organelle inner membrane;1.18842205742646e-23!GO:0012505;endomembrane system;4.92840831992594e-23!GO:0005681;spliceosome;5.59699704507706e-23!GO:0044451;nucleoplasm part;4.15957707966334e-22!GO:0044445;cytosolic part;1.31586214041807e-21!GO:0005743;mitochondrial inner membrane;1.92020383614796e-21!GO:0022402;cell cycle process;2.25750974813666e-21!GO:0032553;ribonucleotide binding;9.79219947571949e-21!GO:0032555;purine ribonucleotide binding;9.79219947571949e-21!GO:0017076;purine nucleotide binding;1.50659657214369e-20!GO:0043412;biopolymer modification;1.97793186035528e-20!GO:0016462;pyrophosphatase activity;3.16839701590058e-20!GO:0015934;large ribosomal subunit;3.24605048011571e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.02969945513606e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;6.12258070020881e-20!GO:0017111;nucleoside-triphosphatase activity;1.02886339786043e-19!GO:0043285;biopolymer catabolic process;1.39810483306252e-19!GO:0000278;mitotic cell cycle;3.20518283978544e-19!GO:0015935;small ribosomal subunit;3.94507982969781e-19!GO:0005524;ATP binding;4.51868004309852e-19!GO:0006119;oxidative phosphorylation;4.60397333074791e-19!GO:0006512;ubiquitin cycle;4.71552571234654e-19!GO:0006457;protein folding;4.77481737121704e-19!GO:0022618;protein-RNA complex assembly;4.83488483709496e-19!GO:0044265;cellular macromolecule catabolic process;4.83488483709496e-19!GO:0016874;ligase activity;7.30551077430143e-19!GO:0006464;protein modification process;1.00170542219499e-18!GO:0032559;adenyl ribonucleotide binding;1.02254065173167e-18!GO:0005730;nucleolus;1.4438835019462e-18!GO:0030554;adenyl nucleotide binding;2.65486097343842e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.98989436761723e-18!GO:0019941;modification-dependent protein catabolic process;3.67388891949938e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.67388891949938e-18!GO:0031980;mitochondrial lumen;5.07238967186145e-18!GO:0005759;mitochondrial matrix;5.07238967186145e-18!GO:0006511;ubiquitin-dependent protein catabolic process;5.94098807174737e-18!GO:0044455;mitochondrial membrane part;6.05467995933586e-18!GO:0044257;cellular protein catabolic process;1.08118735808061e-17!GO:0006974;response to DNA damage stimulus;1.20984238834501e-17!GO:0005694;chromosome;1.47327515252522e-17!GO:0009057;macromolecule catabolic process;6.55835052187653e-17!GO:0005794;Golgi apparatus;6.63611517894294e-17!GO:0030163;protein catabolic process;3.29792121010993e-16!GO:0006605;protein targeting;3.32658404408462e-16!GO:0043687;post-translational protein modification;4.0842300542195e-16!GO:0008134;transcription factor binding;5.75663547020401e-16!GO:0051276;chromosome organization and biogenesis;6.46740602904431e-16!GO:0008135;translation factor activity, nucleic acid binding;7.73328049390053e-16!GO:0044248;cellular catabolic process;9.16317290268907e-16!GO:0006281;DNA repair;2.3829062308145e-15!GO:0044427;chromosomal part;3.12364032599815e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.48675034764647e-15!GO:0048770;pigment granule;9.47788060637541e-15!GO:0042470;melanosome;9.47788060637541e-15!GO:0006260;DNA replication;1.09326033186437e-14!GO:0000087;M phase of mitotic cell cycle;1.28738303590259e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.83340318740608e-14!GO:0007067;mitosis;2.00643353841195e-14!GO:0005635;nuclear envelope;2.17358996667777e-14!GO:0003676;nucleic acid binding;2.2727145676869e-14!GO:0012501;programmed cell death;3.14904335687363e-14!GO:0005746;mitochondrial respiratory chain;3.34888620046476e-14!GO:0022403;cell cycle phase;4.32741473478257e-14!GO:0005761;mitochondrial ribosome;5.32491324810399e-14!GO:0000313;organellar ribosome;5.32491324810399e-14!GO:0006915;apoptosis;6.30589782078223e-14!GO:0048193;Golgi vesicle transport;6.9932329293424e-14!GO:0042254;ribosome biogenesis and assembly;1.11346392180896e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.23511678328353e-13!GO:0051301;cell division;1.86297706197434e-13!GO:0051726;regulation of cell cycle;1.97030182797855e-13!GO:0000074;regulation of progression through cell cycle;2.31437631487273e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.5472415352729e-13!GO:0008219;cell death;3.36726727015421e-13!GO:0016265;death;3.36726727015421e-13!GO:0031965;nuclear membrane;3.37301728388287e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.40491965906775e-13!GO:0003954;NADH dehydrogenase activity;3.40491965906775e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.40491965906775e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;4.0167710174344e-13!GO:0005783;endoplasmic reticulum;6.42444904043754e-13!GO:0051082;unfolded protein binding;6.72289523533859e-13!GO:0016887;ATPase activity;9.70211875758912e-13!GO:0006323;DNA packaging;1.83691586405134e-12!GO:0003743;translation initiation factor activity;1.83691586405134e-12!GO:0016192;vesicle-mediated transport;2.52517039814594e-12!GO:0006413;translational initiation;3.11040475185644e-12!GO:0044453;nuclear membrane part;3.41869650102613e-12!GO:0044432;endoplasmic reticulum part;3.89476227474212e-12!GO:0009719;response to endogenous stimulus;5.41342665352658e-12!GO:0000279;M phase;5.75426657508436e-12!GO:0042623;ATPase activity, coupled;8.33602121573197e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.68084975456276e-12!GO:0000375;RNA splicing, via transesterification reactions;8.68084975456276e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.68084975456276e-12!GO:0006913;nucleocytoplasmic transport;9.85340930863734e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62234283975059e-11!GO:0006446;regulation of translational initiation;1.64628801222949e-11!GO:0016604;nuclear body;1.7313911773648e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.86867224810013e-11!GO:0042773;ATP synthesis coupled electron transport;1.86867224810013e-11!GO:0051169;nuclear transport;2.10023112543532e-11!GO:0051186;cofactor metabolic process;2.69087524333228e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.98812668911398e-11!GO:0045271;respiratory chain complex I;2.98812668911398e-11!GO:0005747;mitochondrial respiratory chain complex I;2.98812668911398e-11!GO:0051246;regulation of protein metabolic process;7.22691041931756e-11!GO:0005643;nuclear pore;8.49009935196686e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.69378569173758e-11!GO:0016070;RNA metabolic process;9.38425965767564e-11!GO:0008639;small protein conjugating enzyme activity;1.03186507233109e-10!GO:0004386;helicase activity;1.07674602359783e-10!GO:0006399;tRNA metabolic process;1.12845535773016e-10!GO:0006366;transcription from RNA polymerase II promoter;1.37234774427295e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.57730549580761e-10!GO:0006461;protein complex assembly;2.8611574949703e-10!GO:0009055;electron carrier activity;2.88770848968166e-10!GO:0004842;ubiquitin-protein ligase activity;3.90559515480839e-10!GO:0050657;nucleic acid transport;3.9258317527598e-10!GO:0051236;establishment of RNA localization;3.9258317527598e-10!GO:0050658;RNA transport;3.9258317527598e-10!GO:0006403;RNA localization;4.93906242933194e-10!GO:0000785;chromatin;5.56121186328773e-10!GO:0019787;small conjugating protein ligase activity;6.93090475128113e-10!GO:0008565;protein transporter activity;7.08880936283272e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.91906952017625e-10!GO:0003712;transcription cofactor activity;1.15694564251613e-09!GO:0065002;intracellular protein transport across a membrane;1.24701283635372e-09!GO:0006793;phosphorus metabolic process;1.52578626714578e-09!GO:0006796;phosphate metabolic process;1.52578626714578e-09!GO:0009056;catabolic process;2.01242179368072e-09!GO:0006732;coenzyme metabolic process;2.28698875092296e-09!GO:0005789;endoplasmic reticulum membrane;2.55100195857437e-09!GO:0016072;rRNA metabolic process;2.68358106923851e-09!GO:0008026;ATP-dependent helicase activity;2.76143633652315e-09!GO:0016607;nuclear speck;4.12798580519341e-09!GO:0046930;pore complex;4.2387732467806e-09!GO:0044431;Golgi apparatus part;6.22252961782809e-09!GO:0017038;protein import;6.69786696003432e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.69786696003432e-09!GO:0004812;aminoacyl-tRNA ligase activity;6.69786696003432e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.69786696003432e-09!GO:0016787;hydrolase activity;7.15213046356236e-09!GO:0016881;acid-amino acid ligase activity;9.19724211078665e-09!GO:0006364;rRNA processing;9.72940388070313e-09!GO:0016740;transferase activity;9.97837123128577e-09!GO:0043067;regulation of programmed cell death;1.2013109589559e-08!GO:0042981;regulation of apoptosis;1.49351611642603e-08!GO:0043038;amino acid activation;1.56885684719299e-08!GO:0006418;tRNA aminoacylation for protein translation;1.56885684719299e-08!GO:0043039;tRNA aminoacylation;1.56885684719299e-08!GO:0048523;negative regulation of cellular process;1.62835298890154e-08!GO:0005768;endosome;1.65438130902806e-08!GO:0051028;mRNA transport;1.68150853890357e-08!GO:0016568;chromatin modification;1.80099272111545e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07415558022598e-08!GO:0030120;vesicle coat;3.08073498581998e-08!GO:0030662;coated vesicle membrane;3.08073498581998e-08!GO:0015630;microtubule cytoskeleton;3.83250906639142e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.85839421760117e-08!GO:0006333;chromatin assembly or disassembly;5.91381240604264e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.48307272957974e-08!GO:0005793;ER-Golgi intermediate compartment;6.92852436724764e-08!GO:0007005;mitochondrion organization and biogenesis;6.92852436724764e-08!GO:0032446;protein modification by small protein conjugation;7.82126770798494e-08!GO:0065004;protein-DNA complex assembly;1.00850571326325e-07!GO:0016567;protein ubiquitination;1.14991781916809e-07!GO:0048475;coated membrane;1.30193384404498e-07!GO:0030117;membrane coat;1.30193384404498e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.42492556678475e-07!GO:0009259;ribonucleotide metabolic process;1.5676207714916e-07!GO:0005667;transcription factor complex;1.71908540311911e-07!GO:0006261;DNA-dependent DNA replication;1.80423406132763e-07!GO:0006163;purine nucleotide metabolic process;2.06457137757679e-07!GO:0016310;phosphorylation;2.54518708550495e-07!GO:0048519;negative regulation of biological process;2.64710573357783e-07!GO:0016563;transcription activator activity;3.11349666437232e-07!GO:0015986;ATP synthesis coupled proton transport;3.59173870990901e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.59173870990901e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.75130010652371e-07!GO:0006164;purine nucleotide biosynthetic process;3.8764957524647e-07!GO:0009060;aerobic respiration;4.96803349126881e-07!GO:0000139;Golgi membrane;5.3740868579353e-07!GO:0005819;spindle;7.20566173700927e-07!GO:0009150;purine ribonucleotide metabolic process;7.83200429757237e-07!GO:0009260;ribonucleotide biosynthetic process;7.93553901419606e-07!GO:0051188;cofactor biosynthetic process;7.94053626105994e-07!GO:0000151;ubiquitin ligase complex;7.94053626105994e-07!GO:0043566;structure-specific DNA binding;8.8458157202878e-07!GO:0006916;anti-apoptosis;1.08786417051335e-06!GO:0019829;cation-transporting ATPase activity;1.10979583935948e-06!GO:0043069;negative regulation of programmed cell death;1.18773211286472e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.22494658870214e-06!GO:0003697;single-stranded DNA binding;1.34461126808946e-06!GO:0009141;nucleoside triphosphate metabolic process;1.35908639064695e-06!GO:0005813;centrosome;1.3813679534466e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.44592232516961e-06!GO:0043623;cellular protein complex assembly;1.60100271098044e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.74448433324078e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.74448433324078e-06!GO:0048522;positive regulation of cellular process;1.76740640740642e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.83737067582076e-06!GO:0045333;cellular respiration;2.40878920145245e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.50022407667656e-06!GO:0006754;ATP biosynthetic process;2.81496531069295e-06!GO:0006753;nucleoside phosphate metabolic process;2.81496531069295e-06!GO:0043066;negative regulation of apoptosis;2.86106374382921e-06!GO:0000775;chromosome, pericentric region;3.25126198027923e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.25627649703929e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.32225219696765e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.32225219696765e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.38249844801604e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.38249844801604e-06!GO:0007051;spindle organization and biogenesis;4.00347650422297e-06!GO:0005798;Golgi-associated vesicle;4.1680862274532e-06!GO:0046034;ATP metabolic process;4.1680862274532e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.39622114806023e-06!GO:0005815;microtubule organizing center;4.43238494237616e-06!GO:0051170;nuclear import;4.58136843158251e-06!GO:0000245;spliceosome assembly;4.97480889566676e-06!GO:0003724;RNA helicase activity;5.14289714398295e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.28958252568586e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.41719650283072e-06!GO:0045786;negative regulation of progression through cell cycle;6.08900368921551e-06!GO:0045259;proton-transporting ATP synthase complex;6.63405398638055e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.65549205734147e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.96127425504108e-06!GO:0006606;protein import into nucleus;9.15387497947939e-06!GO:0050794;regulation of cellular process;1.0525657120276e-05!GO:0009108;coenzyme biosynthetic process;1.09529102354808e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.15210958668715e-05!GO:0006613;cotranslational protein targeting to membrane;1.1545649584759e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.1782995390494e-05!GO:0000075;cell cycle checkpoint;1.30577841785261e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.49774138068234e-05!GO:0016779;nucleotidyltransferase activity;1.52397561932496e-05!GO:0003713;transcription coactivator activity;1.64267304304307e-05!GO:0006752;group transfer coenzyme metabolic process;1.64688568642657e-05!GO:0019899;enzyme binding;1.79741856100727e-05!GO:0044440;endosomal part;1.8032666501572e-05!GO:0010008;endosome membrane;1.8032666501572e-05!GO:0007264;small GTPase mediated signal transduction;1.82717553924937e-05!GO:0051168;nuclear export;2.0612423938807e-05!GO:0006401;RNA catabolic process;2.42144011436812e-05!GO:0004298;threonine endopeptidase activity;2.7153191914023e-05!GO:0031324;negative regulation of cellular metabolic process;2.84092037287728e-05!GO:0007088;regulation of mitosis;2.9387043522109e-05!GO:0005762;mitochondrial large ribosomal subunit;2.94487926595611e-05!GO:0000315;organellar large ribosomal subunit;2.94487926595611e-05!GO:0003924;GTPase activity;3.03460027022725e-05!GO:0051329;interphase of mitotic cell cycle;3.05484983935762e-05!GO:0031497;chromatin assembly;3.07086674130548e-05!GO:0009892;negative regulation of metabolic process;3.09302288406318e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.11509794486629e-05!GO:0007010;cytoskeleton organization and biogenesis;3.43329888575708e-05!GO:0006099;tricarboxylic acid cycle;3.673563086613e-05!GO:0046356;acetyl-CoA catabolic process;3.673563086613e-05!GO:0006334;nucleosome assembly;4.44881197279494e-05!GO:0045454;cell redox homeostasis;4.87998304310125e-05!GO:0031988;membrane-bound vesicle;5.65285438016461e-05!GO:0045941;positive regulation of transcription;5.78746980491653e-05!GO:0016023;cytoplasmic membrane-bound vesicle;5.88415099857775e-05!GO:0006084;acetyl-CoA metabolic process;6.17218508082819e-05!GO:0065009;regulation of a molecular function;6.62480081293265e-05!GO:0000314;organellar small ribosomal subunit;6.64390435672612e-05!GO:0005763;mitochondrial small ribosomal subunit;6.64390435672612e-05!GO:0007243;protein kinase cascade;6.83373086531347e-05!GO:0051325;interphase;7.26630570542077e-05!GO:0009117;nucleotide metabolic process;7.29106273584822e-05!GO:0043021;ribonucleoprotein binding;7.57782187605459e-05!GO:0009109;coenzyme catabolic process;7.71010032497348e-05!GO:0006402;mRNA catabolic process;7.71243128477871e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.27759561488815e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;8.71430318480628e-05!GO:0051427;hormone receptor binding;9.41784217939799e-05!GO:0042802;identical protein binding;0.000103220982596764!GO:0005525;GTP binding;0.000115681186578017!GO:0051252;regulation of RNA metabolic process;0.000125588037565009!GO:0030036;actin cytoskeleton organization and biogenesis;0.000130487365758216!GO:0003899;DNA-directed RNA polymerase activity;0.000138412779755983!GO:0051052;regulation of DNA metabolic process;0.00014094576541524!GO:0031982;vesicle;0.000144992027456792!GO:0016363;nuclear matrix;0.000186896261277433!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000188483107681768!GO:0051187;cofactor catabolic process;0.00018972177111859!GO:0048518;positive regulation of biological process;0.000192156491627743!GO:0031410;cytoplasmic vesicle;0.000194661485385368!GO:0035257;nuclear hormone receptor binding;0.000197065202342261!GO:0031072;heat shock protein binding;0.000227899244647772!GO:0045893;positive regulation of transcription, DNA-dependent;0.000235818515378549!GO:0003729;mRNA binding;0.000241297493249458!GO:0005769;early endosome;0.000255276287648364!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000263368814025224!GO:0008092;cytoskeletal protein binding;0.000269257049777034!GO:0005657;replication fork;0.000312921658761176!GO:0016853;isomerase activity;0.000333840282348284!GO:0030658;transport vesicle membrane;0.00033398013615324!GO:0008094;DNA-dependent ATPase activity;0.000353989494528267!GO:0006612;protein targeting to membrane;0.000364045963929121!GO:0031252;leading edge;0.00036520165065018!GO:0005770;late endosome;0.000375828805968497!GO:0004674;protein serine/threonine kinase activity;0.000387656833818032!GO:0003690;double-stranded DNA binding;0.000410120907689445!GO:0008186;RNA-dependent ATPase activity;0.000424145157349678!GO:0008022;protein C-terminus binding;0.000491029251998781!GO:0006839;mitochondrial transport;0.000544729625739675!GO:0016564;transcription repressor activity;0.000546455410016598!GO:0006626;protein targeting to mitochondrion;0.000586699823846106!GO:0000049;tRNA binding;0.000598589273651324!GO:0030118;clathrin coat;0.000647563397316831!GO:0051338;regulation of transferase activity;0.000671596120317554!GO:0003682;chromatin binding;0.00070810791955379!GO:0005788;endoplasmic reticulum lumen;0.000741672215196333!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000741672215196333!GO:0006091;generation of precursor metabolites and energy;0.000741672215196333!GO:0003714;transcription corepressor activity;0.000764532909838158!GO:0005885;Arp2/3 protein complex;0.000798629724956164!GO:0006302;double-strand break repair;0.000809841365451641!GO:0030660;Golgi-associated vesicle membrane;0.00082172893846296!GO:0043681;protein import into mitochondrion;0.000825233819185536!GO:0009967;positive regulation of signal transduction;0.000825233819185536!GO:0019752;carboxylic acid metabolic process;0.000828096214199334!GO:0030133;transport vesicle;0.000851855089726479!GO:0048471;perinuclear region of cytoplasm;0.000869607731514225!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000883630746831309!GO:0000776;kinetochore;0.000889139942284552!GO:0005741;mitochondrial outer membrane;0.00089296360343236!GO:0006082;organic acid metabolic process;0.000921580083708697!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000929383739572847!GO:0003684;damaged DNA binding;0.000942794361296683!GO:0008033;tRNA processing;0.00101612090602272!GO:0016859;cis-trans isomerase activity;0.00102351330498778!GO:0006520;amino acid metabolic process;0.00105730522000426!GO:0030132;clathrin coat of coated pit;0.00107154305825662!GO:0030029;actin filament-based process;0.00107166084393524!GO:0005048;signal sequence binding;0.00107959787794914!GO:0005905;coated pit;0.0010978622913104!GO:0045045;secretory pathway;0.00111749408957078!GO:0006417;regulation of translation;0.00112582568024422!GO:0004004;ATP-dependent RNA helicase activity;0.00112803703438039!GO:0043549;regulation of kinase activity;0.00113338898375258!GO:0032561;guanyl ribonucleotide binding;0.00113338898375258!GO:0019001;guanyl nucleotide binding;0.00113338898375258!GO:0031968;organelle outer membrane;0.00118155842030298!GO:0043488;regulation of mRNA stability;0.00119039373800465!GO:0043487;regulation of RNA stability;0.00119039373800465!GO:0032508;DNA duplex unwinding;0.00128646594648658!GO:0032392;DNA geometric change;0.00128646594648658!GO:0006950;response to stress;0.00145513445946602!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00146716236697693!GO:0016791;phosphoric monoester hydrolase activity;0.00148308647964343!GO:0006352;transcription initiation;0.00152074278348218!GO:0007052;mitotic spindle organization and biogenesis;0.00153915434289381!GO:0016311;dephosphorylation;0.00155629739399277!GO:0033116;ER-Golgi intermediate compartment membrane;0.00155704726731116!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00156081349220704!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00156263008045422!GO:0048500;signal recognition particle;0.00156286963923026!GO:0044452;nucleolar part;0.00158822346044013!GO:0019867;outer membrane;0.00164663224630518!GO:0050790;regulation of catalytic activity;0.00176861055699699!GO:0051789;response to protein stimulus;0.00185217507344758!GO:0006986;response to unfolded protein;0.00185217507344758!GO:0007093;mitotic cell cycle checkpoint;0.00188783254015209!GO:0016301;kinase activity;0.00191267509564442!GO:0030867;rough endoplasmic reticulum membrane;0.00191992684004469!GO:0009893;positive regulation of metabolic process;0.00197363980646353!GO:0005876;spindle microtubule;0.00211641576508329!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00225882317872447!GO:0030125;clathrin vesicle coat;0.00225882317872447!GO:0030665;clathrin coated vesicle membrane;0.00225882317872447!GO:0051920;peroxiredoxin activity;0.00226158317953894!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00235089417794886!GO:0000059;protein import into nucleus, docking;0.00243305991730799!GO:0016197;endosome transport;0.00244614014415483!GO:0051128;regulation of cellular component organization and biogenesis;0.00252631669529734!GO:0008654;phospholipid biosynthetic process;0.00253873333038609!GO:0045859;regulation of protein kinase activity;0.00255880095860986!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0025784192048117!GO:0015399;primary active transmembrane transporter activity;0.0025784192048117!GO:0030119;AP-type membrane coat adaptor complex;0.00258356107799086!GO:0048468;cell development;0.00261454740640471!GO:0016481;negative regulation of transcription;0.00264631656611045!GO:0050662;coenzyme binding;0.00264631656611045!GO:0016491;oxidoreductase activity;0.00265315265877772!GO:0048037;cofactor binding;0.00265725286932661!GO:0006891;intra-Golgi vesicle-mediated transport;0.00266867878772745!GO:0030176;integral to endoplasmic reticulum membrane;0.00273812119560718!GO:0030131;clathrin adaptor complex;0.00282596885010973!GO:0007265;Ras protein signal transduction;0.00282596885010973!GO:0006405;RNA export from nucleus;0.0029263622797071!GO:0000082;G1/S transition of mitotic cell cycle;0.00295460412349866!GO:0006383;transcription from RNA polymerase III promoter;0.00303015693971411!GO:0005773;vacuole;0.00303015693971411!GO:0005874;microtubule;0.00312576215120794!GO:0006268;DNA unwinding during replication;0.00314492115718696!GO:0005637;nuclear inner membrane;0.00316036291050199!GO:0050789;regulation of biological process;0.00316728749905894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00327715839903013!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00327715839903013!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00327715839903013!GO:0007059;chromosome segregation;0.00327715839903013!GO:0006414;translational elongation;0.00341291328695254!GO:0046983;protein dimerization activity;0.00344713994553711!GO:0016272;prefoldin complex;0.0035273193997197!GO:0007050;cell cycle arrest;0.0037815744711965!GO:0031326;regulation of cellular biosynthetic process;0.00387484669145703!GO:0035258;steroid hormone receptor binding;0.00392357383131579!GO:0007017;microtubule-based process;0.00395925360104148!GO:0004721;phosphoprotein phosphatase activity;0.00402183473853709!GO:0008168;methyltransferase activity;0.0040708990897327!GO:0009889;regulation of biosynthetic process;0.00416121233780472!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00418601302790065!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00442281705774273!GO:0045047;protein targeting to ER;0.00442281705774273!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00446923623091277!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00450326946254661!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00451300047239153!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00451300047239153!GO:0003678;DNA helicase activity;0.00460354263871548!GO:0016741;transferase activity, transferring one-carbon groups;0.00486900677598623!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00497401846570943!GO:0006818;hydrogen transport;0.00500162125886329!GO:0007242;intracellular signaling cascade;0.00506451979422294!GO:0015980;energy derivation by oxidation of organic compounds;0.00508495913587228!GO:0030880;RNA polymerase complex;0.00527364620756431!GO:0051287;NAD binding;0.0055630756944698!GO:0016251;general RNA polymerase II transcription factor activity;0.00559316683238343!GO:0015992;proton transport;0.00560914786534088!GO:0007006;mitochondrial membrane organization and biogenesis;0.00566363717864963!GO:0003711;transcription elongation regulator activity;0.00574806796607853!GO:0006611;protein export from nucleus;0.00576607574834559!GO:0030663;COPI coated vesicle membrane;0.00576607574834559!GO:0030126;COPI vesicle coat;0.00576607574834559!GO:0008139;nuclear localization sequence binding;0.00578137804203619!GO:0008312;7S RNA binding;0.00583660577987751!GO:0030134;ER to Golgi transport vesicle;0.00599975825170434!GO:0000786;nucleosome;0.00605381372885789!GO:0051087;chaperone binding;0.00613131185809508!GO:0030659;cytoplasmic vesicle membrane;0.00620005722697331!GO:0006284;base-excision repair;0.00622760496021305!GO:0005856;cytoskeleton;0.00640132079528141!GO:0006275;regulation of DNA replication;0.00641110745289191!GO:0005083;small GTPase regulator activity;0.00645576232422161!GO:0005684;U2-dependent spliceosome;0.0068486999696029!GO:0031325;positive regulation of cellular metabolic process;0.00684894667671545!GO:0008632;apoptotic program;0.00693808811720773!GO:0006892;post-Golgi vesicle-mediated transport;0.00697853911058472!GO:0048487;beta-tubulin binding;0.0070231687232647!GO:0030127;COPII vesicle coat;0.00724382605709565!GO:0012507;ER to Golgi transport vesicle membrane;0.00724382605709565!GO:0046483;heterocycle metabolic process;0.00729673119824068!GO:0006289;nucleotide-excision repair;0.0074655657811916!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00770988557937411!GO:0004518;nuclease activity;0.00802644431819513!GO:0030521;androgen receptor signaling pathway;0.00804140324219542!GO:0043022;ribosome binding;0.00813138049276291!GO:0004527;exonuclease activity;0.00911162378384562!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00927769045389187!GO:0000428;DNA-directed RNA polymerase complex;0.00927769045389187!GO:0043065;positive regulation of apoptosis;0.00958861788504059!GO:0004722;protein serine/threonine phosphatase activity;0.00960040272511222!GO:0006270;DNA replication initiation;0.00984792388605526!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0100535784995982!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0102719450440404!GO:0016044;membrane organization and biogenesis;0.0105197110531045!GO:0019843;rRNA binding;0.0106345897683286!GO:0008287;protein serine/threonine phosphatase complex;0.0106582595988284!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0107240995899576!GO:0016584;nucleosome positioning;0.0107354002219436!GO:0017166;vinculin binding;0.0108298501198886!GO:0030137;COPI-coated vesicle;0.0112784336143439!GO:0043492;ATPase activity, coupled to movement of substances;0.0113641993211397!GO:0033673;negative regulation of kinase activity;0.0117653827892072!GO:0006469;negative regulation of protein kinase activity;0.0117653827892072!GO:0006470;protein amino acid dephosphorylation;0.0118412110017916!GO:0000323;lytic vacuole;0.0119656347756564!GO:0005764;lysosome;0.0119656347756564!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.011976207545559!GO:0015002;heme-copper terminal oxidase activity;0.011976207545559!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.011976207545559!GO:0004129;cytochrome-c oxidase activity;0.011976207545559!GO:0008637;apoptotic mitochondrial changes;0.0121853361662949!GO:0043068;positive regulation of programmed cell death;0.0122113695293189!GO:0008361;regulation of cell size;0.0122135396277321!GO:0003746;translation elongation factor activity;0.0125848346442674!GO:0009112;nucleobase metabolic process;0.0131124031380665!GO:0006595;polyamine metabolic process;0.0133733071441697!GO:0048146;positive regulation of fibroblast proliferation;0.0136768562455747!GO:0015631;tubulin binding;0.0139929869665084!GO:0008234;cysteine-type peptidase activity;0.0140291656182113!GO:0031625;ubiquitin protein ligase binding;0.0145406209302137!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0147461118370623!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0147891390593801!GO:0000792;heterochromatin;0.01485244068361!GO:0009116;nucleoside metabolic process;0.0151790917845133!GO:0050681;androgen receptor binding;0.0154235752894635!GO:0008243;plasminogen activator activity;0.0156757088437534!GO:0006310;DNA recombination;0.015693190068724!GO:0009966;regulation of signal transduction;0.0162332229537384!GO:0007266;Rho protein signal transduction;0.0167146998002243!GO:0031529;ruffle organization and biogenesis;0.0168187391480989!GO:0008276;protein methyltransferase activity;0.0168722487318545!GO:0006984;ER-nuclear signaling pathway;0.0171094941048919!GO:0006509;membrane protein ectodomain proteolysis;0.0171284081918542!GO:0033619;membrane protein proteolysis;0.0171284081918542!GO:0048144;fibroblast proliferation;0.0171353984229742!GO:0048145;regulation of fibroblast proliferation;0.0171353984229742!GO:0007030;Golgi organization and biogenesis;0.0177389248463001!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0177521076871452!GO:0033043;regulation of organelle organization and biogenesis;0.0177521076871452!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0179280819777245!GO:0005669;transcription factor TFIID complex;0.0179658911440478!GO:0051348;negative regulation of transferase activity;0.0179922774887076!GO:0046982;protein heterodimerization activity;0.0180109208381606!GO:0046474;glycerophospholipid biosynthetic process;0.0180848743370745!GO:0005791;rough endoplasmic reticulum;0.0181314812084635!GO:0006354;RNA elongation;0.0182032472541556!GO:0016049;cell growth;0.0186304556426023!GO:0030145;manganese ion binding;0.0186905604617804!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0186905604617804!GO:0007034;vacuolar transport;0.0191614281280728!GO:0044433;cytoplasmic vesicle part;0.019545066504429!GO:0004860;protein kinase inhibitor activity;0.020053627785945!GO:0006519;amino acid and derivative metabolic process;0.0201234439931145!GO:0006376;mRNA splice site selection;0.0203172898589534!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0203172898589534!GO:0005832;chaperonin-containing T-complex;0.0204297593406808!GO:0022890;inorganic cation transmembrane transporter activity;0.0208154482023777!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0208738546173742!GO:0031124;mRNA 3'-end processing;0.0208738546173742!GO:0001726;ruffle;0.0211607560367412!GO:0045936;negative regulation of phosphate metabolic process;0.0215785876162252!GO:0008180;signalosome;0.0217668555175622!GO:0030695;GTPase regulator activity;0.022343743770403!GO:0008250;oligosaccharyl transferase complex;0.0226232825246939!GO:0001558;regulation of cell growth;0.0226662715202154!GO:0045334;clathrin-coated endocytic vesicle;0.0229093378834336!GO:0004576;oligosaccharyl transferase activity;0.022955910945066!GO:0007346;regulation of progression through mitotic cell cycle;0.0231497919314202!GO:0009165;nucleotide biosynthetic process;0.0231702014651761!GO:0007041;lysosomal transport;0.0231742315674002!GO:0000922;spindle pole;0.023271865646449!GO:0030140;trans-Golgi network transport vesicle;0.0236353967005042!GO:0051101;regulation of DNA binding;0.0237626992653772!GO:0043189;H4/H2A histone acetyltransferase complex;0.0239307479029287!GO:0001889;liver development;0.0241553168491331!GO:0003702;RNA polymerase II transcription factor activity;0.0250287293687497!GO:0032940;secretion by cell;0.0252437389819687!GO:0016569;covalent chromatin modification;0.0257505842594413!GO:0046489;phosphoinositide biosynthetic process;0.026331115009802!GO:0051059;NF-kappaB binding;0.0263894816983134!GO:0000118;histone deacetylase complex;0.0264103489653475!GO:0035267;NuA4 histone acetyltransferase complex;0.0265545303464605!GO:0008538;proteasome activator activity;0.0268801962311442!GO:0000339;RNA cap binding;0.0276729382031335!GO:0000096;sulfur amino acid metabolic process;0.0278952511699681!GO:0006144;purine base metabolic process;0.0284156314355964!GO:0006672;ceramide metabolic process;0.0285279080681642!GO:0044262;cellular carbohydrate metabolic process;0.0300260661966017!GO:0030433;ER-associated protein catabolic process;0.0303716288719561!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0303716288719561!GO:0032984;macromolecular complex disassembly;0.0305466046593167!GO:0030911;TPR domain binding;0.0305513729312597!GO:0008629;induction of apoptosis by intracellular signals;0.0307580638147274!GO:0012506;vesicle membrane;0.0308904317563527!GO:0016653;oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor;0.0310370930213638!GO:0046426;negative regulation of JAK-STAT cascade;0.031078533467293!GO:0045792;negative regulation of cell size;0.0311762022723164!GO:0051098;regulation of binding;0.0313460905722664!GO:0043624;cellular protein complex disassembly;0.0316275927136021!GO:0008652;amino acid biosynthetic process;0.0317287498693309!GO:0032535;regulation of cellular component size;0.0317287498693309!GO:0008047;enzyme activator activity;0.0318195885424801!GO:0019783;small conjugating protein-specific protease activity;0.0319267723506187!GO:0045926;negative regulation of growth;0.0321349693984914!GO:0030128;clathrin coat of endocytic vesicle;0.0322488062226808!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0322488062226808!GO:0030122;AP-2 adaptor complex;0.0322488062226808!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0323985752310862!GO:0006650;glycerophospholipid metabolic process;0.0324141447135587!GO:0000123;histone acetyltransferase complex;0.0326459424491825!GO:0030832;regulation of actin filament length;0.0326633294855496!GO:0006338;chromatin remodeling;0.0332422608646967!GO:0051053;negative regulation of DNA metabolic process;0.0338967233559043!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.034025119902864!GO:0030308;negative regulation of cell growth;0.0340585056400966!GO:0009119;ribonucleoside metabolic process;0.0345470569703213!GO:0031902;late endosome membrane;0.0345470569703213!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0345470569703213!GO:0040029;regulation of gene expression, epigenetic;0.0345936858373628!GO:0042393;histone binding;0.0347990825120142!GO:0031371;ubiquitin conjugating enzyme complex;0.0348407298567333!GO:0030833;regulation of actin filament polymerization;0.034983501480393!GO:0042326;negative regulation of phosphorylation;0.0350738793692253!GO:0032259;methylation;0.0356978413435742!GO:0050178;phenylpyruvate tautomerase activity;0.0359610035860607!GO:0042770;DNA damage response, signal transduction;0.0361733253502691!GO:0032981;mitochondrial respiratory chain complex I assembly;0.036714273926845!GO:0010257;NADH dehydrogenase complex assembly;0.036714273926845!GO:0033108;mitochondrial respiratory chain complex assembly;0.036714273926845!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.036714273926845!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.036714273926845!GO:0006497;protein amino acid lipidation;0.0368341470375997!GO:0043414;biopolymer methylation;0.0370114100317637!GO:0004128;cytochrome-b5 reductase activity;0.0371063601053798!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0372341304032943!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0376638888226666!GO:0005869;dynactin complex;0.0378532628436787!GO:0000725;recombinational repair;0.0379978546971678!GO:0000724;double-strand break repair via homologous recombination;0.0379978546971678!GO:0046519;sphingoid metabolic process;0.0385970720803051!GO:0005784;translocon complex;0.0392419677000821!GO:0004843;ubiquitin-specific protease activity;0.0393114852200414!GO:0009303;rRNA transcription;0.0397932920053579!GO:0030518;steroid hormone receptor signaling pathway;0.0397967125290449!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0401127002622144!GO:0040008;regulation of growth;0.0401897499434252!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0407435291691906!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0409832960970441!GO:0004003;ATP-dependent DNA helicase activity;0.0410719843553631!GO:0006458;'de novo' protein folding;0.0417026988394283!GO:0051084;'de novo' posttranslational protein folding;0.0417026988394283!GO:0019206;nucleoside kinase activity;0.0419454639015084!GO:0000152;nuclear ubiquitin ligase complex;0.0423771610833068!GO:0042158;lipoprotein biosynthetic process;0.043174154774373!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.043174154774373!GO:0046822;regulation of nucleocytoplasmic transport;0.0439612573365638!GO:0030384;phosphoinositide metabolic process;0.0450423627334333!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0450536541010433!GO:0012510;trans-Golgi network transport vesicle membrane;0.0450536541010433!GO:0043241;protein complex disassembly;0.0454215350448567!GO:0017134;fibroblast growth factor binding;0.0462031684238771!GO:0006607;NLS-bearing substrate import into nucleus;0.0462711706922301!GO:0003756;protein disulfide isomerase activity;0.0463426948620881!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0463426948620881!GO:0060166;olfactory pit development;0.0463426948620881!GO:0021768;nucleus accumbens development;0.0463426948620881!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.0463426948620881!GO:0030508;thiol-disulfide exchange intermediate activity;0.0464814764222687!GO:0015036;disulfide oxidoreductase activity;0.0464814764222687!GO:0031301;integral to organelle membrane;0.0467616880501715!GO:0004680;casein kinase activity;0.0471501628928228!GO:0007173;epidermal growth factor receptor signaling pathway;0.0471758233133542!GO:0030031;cell projection biogenesis;0.0476918949319819!GO:0031123;RNA 3'-end processing;0.0480484162599514!GO:0000287;magnesium ion binding;0.0484653624402317!GO:0006406;mRNA export from nucleus;0.0484724820579856!GO:0004177;aminopeptidase activity;0.0487330295804094!GO:0016407;acetyltransferase activity;0.0487616070141204!GO:0016790;thiolester hydrolase activity;0.0491652596503669!GO:0005862;muscle thin filament tropomyosin;0.0491652596503669!GO:0043596;nuclear replication fork;0.0491652596503669!GO:0032200;telomere organization and biogenesis;0.0492396066564848!GO:0000723;telomere maintenance;0.0492396066564848!GO:0008408;3'-5' exonuclease activity;0.0494429098073181!GO:0051540;metal cluster binding;0.0496436285581219!GO:0051536;iron-sulfur cluster binding;0.0496436285581219!GO:0008426;protein kinase C inhibitor activity;0.0498649364369377
|sample_id=10784
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=ovary
|top_motifs=ZEB1:2.0593910752;SNAI1..3:1.81259568322;FOXQ1:1.60679696463;VSX1,2:1.47795793875;ONECUT1,2:1.34228291945;NKX3-1:1.19526481102;POU2F1..3:1.18907525317;bHLH_family:1.08417602573;POU5F1:1.04212941887;FOXD3:0.957304123526;TFDP1:0.936544709336;TBX4,5:0.919048054413;HOX{A6,A7,B6,B7}:0.904120311951;PPARG:0.859749799989;NKX2-3_NKX2-5:0.827559712296;LMO2:0.792132082414;PITX1..3:0.770154135063;ZNF148:0.765630936825;PAX8:0.763194927888;ELK1,4_GABP{A,B1}:0.745601413499;CRX:0.744081006355;LEF1_TCF7_TCF7L1,2:0.706715174114;TEAD1:0.68023292746;ADNP_IRX_SIX_ZHX:0.664920170257;FOX{I1,J2}:0.664184124423;TFAP2{A,C}:0.637933233796;PBX1:0.62325544939;FOXA2:0.60958743568;E2F1..5:0.608799407064;MYB:0.571294716387;FOS_FOS{B,L1}_JUN{B,D}:0.567182222604;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.543350124947;BACH2:0.51556105086;FOXM1:0.514240132036;BREu{core}:0.493078468155;OCT4_SOX2{dimer}:0.487784243664;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.461518429241;POU1F1:0.46016173568;TFAP2B:0.454014091679;HOX{A5,B5}:0.43608327154;NKX2-2,8:0.417640609624;TEF:0.396056953646;MYOD1:0.391024640973;NANOG:0.376427160393;NR5A1,2:0.375258676534;SOX{8,9,10}:0.340073050912;FOSL2:0.312494470572;CDC5L:0.310838275319;POU6F1:0.299032748195;AIRE:0.287861348299;XCPE1{core}:0.267648269691;NFE2:0.236322302752;FOX{F1,F2,J1}:0.221175003098;STAT5{A,B}:0.217834501689;EN1,2:0.207719154941;GATA6:0.204939814723;FOXN1:0.204478410388;CEBPA,B_DDIT3:0.183706162262;TFCP2:0.175957007305;PAX2:0.111608949669;ELF1,2,4:0.105844172799;SP1:0.0851814080126;HLF:0.0848668479018;IKZF1:0.0834848959123;EGR1..3:0.0726434565625;LHX3,4:0.0653251708911;ARID5B:0.0532486574921;ATF4:0.0440957330143;NFIL3:0.0396674910739;HNF1A:-0.0199256051696;MTE{core}:-0.0433995655648;NFY{A,B,C}:-0.0445352369435;TAL1_TCF{3,4,12}:-0.0506242969998;SOX2:-0.0542127279778;NR6A1:-0.0550474561418;PRRX1,2:-0.055244265631;TBP:-0.0562052906928;CUX2:-0.0818939561469;GLI1..3:-0.0828876415018;MED-1{core}:-0.0903189956638;NFKB1_REL_RELA:-0.0903390888825;HES1:-0.157163710474;HNF4A_NR2F1,2:-0.181041729329;ZFP161:-0.186986668229;RORA:-0.189906613308;ATF5_CREB3:-0.19365895794;ATF6:-0.194939724025;HIC1:-0.198899212238;AHR_ARNT_ARNT2:-0.198965007062;MTF1:-0.202348136637;GTF2A1,2:-0.210863286307;ZNF143:-0.217471724087;ESR1:-0.222699412102;ALX1:-0.223164332694;TLX2:-0.239195677664;MEF2{A,B,C,D}:-0.246946488985;SPI1:-0.259413911815;ETS1,2:-0.263700153023;POU3F1..4:-0.269503823941;ZBTB6:-0.27467985114;SOX17:-0.288295825816;RREB1:-0.293771340488;ZNF384:-0.303494879283;TP53:-0.312898377428;FOXP1:-0.324824911234;BPTF:-0.325244407787;MAZ:-0.336225783961;NKX3-2:-0.33910377547;JUN:-0.342784538359;TOPORS:-0.35017734082;RFX2..5_RFXANK_RFXAP:-0.350467158102;SOX5:-0.358805678031;NKX2-1,4:-0.359635605554;TLX1..3_NFIC{dimer}:-0.363565994552;NRF1:-0.372712832738;IRF7:-0.374796356788;PAX4:-0.377131485543;CREB1:-0.389590198036;SPIB:-0.390484111273;NFE2L2:-0.391836446441;YY1:-0.399986460994;PRDM1:-0.400581615387;RUNX1..3:-0.404840755063;PAX5:-0.419597620845;AR:-0.448568809894;PATZ1:-0.45295497214;GFI1B:-0.458811146682;HMGA1,2:-0.460876361209;EP300:-0.467626252192;ZBTB16:-0.477213072751;FOXO1,3,4:-0.482180783328;FOXL1:-0.48402400728;GFI1:-0.503172878613;MZF1:-0.529522108886;PAX3,7:-0.530862673345;GTF2I:-0.552740974369;ATF2:-0.55970977888;IRF1,2:-0.580296174595;HIF1A:-0.581020453874;UFEwm:-0.605704498885;NR1H4:-0.620191539459;NKX6-1,2:-0.632220068192;EVI1:-0.632430182034;KLF4:-0.640631476024;PAX6:-0.643553822926;FOX{D1,D2}:-0.656496168637;REST:-0.661997215677;RXRA_VDR{dimer}:-0.66825130179;NR3C1:-0.682062372349;HBP1_HMGB_SSRP1_UBTF:-0.686459964645;DMAP1_NCOR{1,2}_SMARC:-0.702086476249;NFATC1..3:-0.707755709085;DBP:-0.713929656802;NFE2L1:-0.71694806536;STAT2,4,6:-0.726388782293;XBP1:-0.735493374878;ZNF423:-0.738098168385;ZIC1..3:-0.755270540621;EBF1:-0.758445278247;SREBF1,2:-0.778791790069;HMX1:-0.784265792138;RFX1:-0.784670396696;PAX1,9:-0.794308636141;PDX1:-0.804306384886;IKZF2:-0.805071808676;SRF:-0.826282610016;ALX4:-0.830178181791;NHLH1,2:-0.835148069692;SPZ1:-0.841895478535;CDX1,2,4:-0.849158923709;ESRRA:-0.890848764952;HSF1,2:-0.89404241012;TFAP4:-0.910954066494;HAND1,2:-0.924385997961;MYFfamily:-0.940787040645;MYBL2:-0.944533386104;TGIF1:-0.957870319195;HOX{A4,D4}:-0.973848066778;MAFB:-0.995971307664;HOXA9_MEIS1:-0.99662275528;FOXP3:-1.01096934804;RBPJ:-1.03519245065;GATA4:-1.07315115387;SMAD1..7,9:-1.20332283307;GCM1,2:-1.20964455507;NFIX:-1.32691292027;T:-1.37370277607;ZNF238:-1.37719592133;GZF1:-1.38138346984;RXR{A,B,G}:-1.4842769326;NANOG{mouse}:-1.62439593869;STAT1,3:-2.46182513324
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10784-110H1;search_select_hide=table117:FF:10784-110H1
}}
}}

Latest revision as of 15:04, 3 June 2020

Name:mucinous cystadenocarcinoma cell line:MCAS
Species:Human (Homo sapiens)
Library ID:CNhs11873
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueovary
dev stageNA
sexfemale
ageunknown
cell typeunclassifiable
cell lineMCAS
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005895
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11873 CAGE DRX007954 DRR008826
Accession ID Hg19

Library idBAMCTSS
CNhs11873 DRZ000251 DRZ001636
Accession ID Hg38

Library idBAMCTSS
CNhs11873 DRZ011601 DRZ012986
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.02
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.316
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.063
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0707
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0283
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0427
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.574
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.243
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.345
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0051
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11873

Jaspar motifP-value
MA0002.20.558
MA0003.10.978
MA0004.10.0619
MA0006.10.22
MA0007.10.94
MA0009.10.219
MA0014.10.156
MA0017.10.435
MA0018.20.337
MA0019.10.349
MA0024.10.001
MA0025.10.0218
MA0027.10.898
MA0028.10.0115
MA0029.10.105
MA0030.10.0322
MA0031.10.187
MA0035.27.0002e-5
MA0038.10.831
MA0039.20.0195
MA0040.10.756
MA0041.10.304
MA0042.10.934
MA0043.10.798
MA0046.10.133
MA0047.20.0288
MA0048.10.622
MA0050.10.0253
MA0051.10.61
MA0052.10.466
MA0055.10.00326
MA0057.10.22
MA0058.10.0439
MA0059.10.2
MA0060.10.522
MA0061.10.428
MA0062.20.00809
MA0065.20.319
MA0066.10.656
MA0067.10.656
MA0068.10.41
MA0069.10.661
MA0070.10.812
MA0071.10.524
MA0072.10.799
MA0073.10.728
MA0074.10.391
MA0076.10.0789
MA0077.10.916
MA0078.10.533
MA0079.20.706
MA0080.20.185
MA0081.10.472
MA0083.10.238
MA0084.10.297
MA0087.10.379
MA0088.10.313
MA0090.16.307e-4
MA0091.10.0283
MA0092.10.123
MA0093.10.0696
MA0099.21.6142e-17
MA0100.10.851
MA0101.10.87
MA0102.20.979
MA0103.11.33447e-12
MA0104.20.285
MA0105.10.0122
MA0106.10.898
MA0107.10.992
MA0108.20.921
MA0111.10.842
MA0112.20.901
MA0113.10.707
MA0114.10.0854
MA0115.10.202
MA0116.10.0303
MA0117.10.611
MA0119.10.618
MA0122.10.565
MA0124.10.881
MA0125.10.187
MA0131.10.891
MA0135.10.284
MA0136.10.942
MA0137.20.11
MA0138.20.0137
MA0139.10.883
MA0140.10.0464
MA0141.10.912
MA0142.10.342
MA0143.10.625
MA0144.10.488
MA0145.10.27
MA0146.10.168
MA0147.10.187
MA0148.10.00461
MA0149.10.144
MA0150.10.0366
MA0152.10.228
MA0153.10.0544
MA0154.10.043
MA0155.10.178
MA0156.10.384
MA0157.10.695
MA0159.10.241
MA0160.10.106
MA0162.10.836
MA0163.10.011
MA0164.10.685
MA0258.10.79
MA0259.10.737



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11873

Novel motifP-value
10.581
100.956
1000.885
1010.0491
1020.403
1030.391
1040.524
1050.063
1060.0745
1070.104
1080.388
1090.00427
110.62
1100.756
1110.465
1120.385
1130.0373
1140.65
1150.813
1160.25
1170.621
1180.568
1190.582
120.673
1200.602
1210.947
1220.015
1230.62
1240.0892
1250.949
1260.385
1270.278
1280.918
1290.592
130.0757
1300.415
1310.512
1320.857
1330.12
1340.0987
1350.0274
1360.112
1370.332
1380.789
1390.665
140.967
1400.794
1410.246
1420.671
1430.22
1440.0383
1450.73
1460.492
1470.0562
1480.138
1490.207
150.179
1500.256
1510.816
1520.0254
1530.628
1540.96
1550.773
1560.225
1570.685
1580.672
1590.767
160.101
1600.949
1610.798
1620.99
1630.159
1640.439
1650.585
1660.122
1670.847
1680.478
1690.177
170.231
180.625
190.261
20.691
200.13
210.503
220.912
230.842
240.681
250.856
260.148
270.723
280.35
290.992
30.538
300.492
310.472
320.00728
330.0924
340.644
350.105
360.591
370.821
380.311
390.617
40.285
400.498
410.129
420.816
430.787
440.412
450.479
460.87
470.829
480.829
490.664
50.668
500.14
510.885
520.541
530.386
540.846
550.536
560.937
570.365
580.829
590.708
60.0255
600.19
610.189
620.649
630.117
640.973
650.562
660.0479
670.569
680.03
690.047
70.552
700.862
710.287
720.0556
730.0108
740.367
750.412
760.685
770.389
780.08
790.00327
80.958
800.556
810.0252
820.00638
830.253
840.465
850.361
860.549
870.0254
880.413
890.773
90.62
900.978
910.108
920.804
930.392
940.46
950.236
960.227
970.964
980.341
990.397



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11873


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
299 (adenocarcinoma)
3111 (cystadenocarcinoma)
3603 (mucinous cystadenocarcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0003134 (female reproductive organ)
0000344 (mucosa)
0005156 (reproductive structure)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100977 (ovary cell line sample)
0100811 (ovary cancer cell line sample)
0104883 (cystadenocarcinoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

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