Personal tools

FF:11601-120H8: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00004955
|DRA_sample_Accession=CAGE@SAMD00004955
|accession_numbers=CAGE;DRX008302;DRR009174;DRZ000599;DRZ001984
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004955
|accession_numbers=CAGE;DRX008302;DRR009174;DRZ000599;DRZ001984;DRZ011949;DRZ013334
|accession_numbers_RNASeq=sRNA-Seq;DRX037119;DRR041485;DRZ007127
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0001007,UBERON:0000055,UBERON:0001281,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0002368,UBERON:0000353,UBERON:0003497,UBERON:0003909,UBERON:0005177,UBERON:0002365,UBERON:0007500,UBERON:0001981,UBERON:0005172,UBERON:0006925,UBERON:0002049,UBERON:0002530,UBERON:0003835,UBERON:0003513,UBERON:0010317,UBERON:0007798,UBERON:0005173,UBERON:0004535,UBERON:0002417,UBERON:0000949,UBERON:0001280,UBERON:0004647,UBERON:0002330,UBERON:0004537,UBERON:0000916,UBERON:0002423,UBERON:0001009
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0001007,UBERON:0000055,UBERON:0001281,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0002368,UBERON:0000353,UBERON:0003497,UBERON:0003909,UBERON:0005177,UBERON:0002365,UBERON:0007500,UBERON:0001981,UBERON:0005172,UBERON:0006925,UBERON:0002049,UBERON:0002530,UBERON:0003835,UBERON:0003513,UBERON:0010317,UBERON:0007798,UBERON:0005173,UBERON:0004535,UBERON:0002417,UBERON:0000949,UBERON:0001280,UBERON:0004647,UBERON:0002330,UBERON:0004537,UBERON:0000916,UBERON:0002423,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000181,CL:0000417,CL:0000668,CL:0000215,CL:0000412,CL:0000255,CL:0000115,CL:0000182,CL:0002262,CL:1000398
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000181,CL:0000417,CL:0000668,CL:0000215,CL:0000412,CL:0000255,CL:0000115,CL:0000182,CL:0002262,CL:1000398
Line 52: Line 54:
|library_id=CNhs12092
|library_id=CNhs12092
|library_id_phase_based=2:CNhs12092
|library_id_phase_based=2:CNhs12092
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11601
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.AGTTCC.11601
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11601
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.AGTTCC.11601
|name=Hepatic Sinusoidal Endothelial Cells, donor2
|name=Hepatic Sinusoidal Endothelial Cells, donor2
|namespace=FANTOM5
|namespace=FANTOM5
Line 59: Line 67:
|profile_rnaseq=
|profile_rnaseq=
|profile_srnaseq=SRhi10008,,,
|profile_srnaseq=SRhi10008,,,
|refex=http://refex.dbcls.jp/genelist.php?lang=en&db=human&roku_valid=1&rk[]=&order_key=score
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.103286393583344,0.169469313468178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227325515428431,0,0,0,0.190324262888429,0,0.618650800442403,0,0,0.770789158311378,0,0,0,0,0,0,0,0,0,0,0,0,-0.0431246780186392,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0609988300615958,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0288670319189471,0,0,0,0,0,0.0139414864905489,0.417479955453205,0,0,0,-0.0584468268118252,0.198892517120489,0,0,0,0,0.282613174539152,0.15169074034633,0,0,0,0,0,0,0.580335882294449,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0,0.0211576327606583,0,0,0,0,0,0
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.103286393583344,0.169469313468178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227325515428431,0,0,0,0.190324262888429,0,0.618650800442403,0,0,0.770789158311378,0,0,0,0,0,0,0,0,0,0,0,0,-0.0431246780186392,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0609988300615958,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0288670319189471,0,0,0,0,0,0.0139414864905489,0.417479955453205,0,0,0,-0.0584468268118252,0.198892517120489,0,0,0,0,0.282613174539152,0.15169074034633,0,0,0,0,0,0,0.580335882294449,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0,0.0211576327606583,0,0,0,0,0,0
|repeat_enrich_byname=0,0,0,0,0.282613174539152,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0.0506966195786965,0.242522477958452,-0.143515142523472,0,0,-0.427279086909571,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,0.088063679020906,0,-0.120879483793741,-0.0827201683234173,-0.0114340900650647,0.094625473269531,-0.055712496781182,0,0,0,-0.0743953358767915,0.265632678498494,0,0,0.395272040762185,0.00897464432776995,0,0,1.18255636156492,0,0.00237366447251353,0.571735610447195,0,-0.253729092362347,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.326988596678969,-0.02053172555047,0,0,0,0.145071103050889,0,0,-0.373286155956567,0.336287558131586,0,0.49482689332686,0,0.0782587987669449,0.0690350064175262,0.155749491972844,-0.16146461202624,0.432934032923311,-0.189981719549847,0.332955833111141,0.38591153114401,0.347960583718545,0.0774828963871083,0.417479955453205,0.184381207564714,0.514402177478508,0.0256771867187373,0,0,0,-0.18480790494298,0,0,-0.109466188699915,-0.204867941795651,0.250686484806793,0.263603836049082,0.120340786440756,0.053931818830004,-0.0395325284566706,-0.0767879271197366,0.0287783373295873,-0.0114824050873422,0.0403375611343915,0,0,0.0923172853138929,0.0342677325253927,0.100782523531781,0,-0.103328936034123,-0.0683442610773682,0,0.122402938657706,0.356274951745727,0,0,0.137831465839048,0,0,0,0,0,0.248054895879612,-0.158843617253308,0.347480320738904,0,0.099160415027597,-0.00355547336704759,0.0610182680026435,0,-0.263608791103677,-0.146009897457394,0,-0.281335920695988,0,0.113895246023524,0.207083879142127,0.231556324026064,0.397785034240978,-0.0584468268118252,-0.150136051481282,0.111799187882389,0.22386794565189,-0.0723311680797661,0.244317486518502,0.94597695255283,0,-0.16693605380792,-0.298849605844666,0.0855609972495107,0.541295764690314,0.380648525776858,-0.144845150771759,0,-0.624980238715314,0,0.404045461224512,0.363311996617,-0.0586408488038281,-0.578968406430662,0,0.332201024282729,1.28153964599119,0,0.328379556783423,0,0,0.230281442442219,0.336407818515535,-0.211650427864589,0.0513348062092344,0,-0.409431632612798,0,0,0.0660185237255439,-0.235476037764389,0,-0.0158139028765234,-0.0288670319189471,-0.223567515418436,0.264677452341924,0,0.011357626173421,0.0709083587177356,0,0.380648525776858,0.83570325054614,0,0.514449888873924,0.127322184290102,0.0484665541809155,-0.108622809454255,0,0,-0.177527765965176,0,-0.0182592191009169,0,0,0.330454585695626,0,0,0,0,-0.0284297732705203,0,0,0,0,0,0,0,-0.314350196339941,-0.354833330216448,0,0.535213816171499,0,0,0,0,0,0,0,0.380648525776858,-0.618533282510021,0.059644503487023,0.257631110100438,0,0,0,0,-0.215723402553475,-0.203236562094724,0.380648525776858,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,0.025544818786709,0,0,0,0.303381480692659,0,0,0,0,-0.170259866581196,0,0,-0.0515942910919308,0,0.363200804092747,0.299066646230017,0,-0.263287750358753,0.501239705850042,0.667929459264865,0,0,0.558832707842828,0,0,-1.03594432163325,-0.0823702229656663,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0.380648525776858,-0.079413690047393,-0.0922240566585104,0,0,0,0,0,0,0,0.266061918068321,-0.0267358888824715,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.338938626936356,0,0,0.103286393583344,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.0139263736721928,0,0,0,0,0,0,0,0.105815227570768,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496196419999148,0,0.0473679527972773,0.075914871768626,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,0.618650800442403,0,0,-0.0920328098005262,0,0,0,0,0,0,0.0926716851201485,0.283896206593131,0.188381255824973,0,0,0,0.135938690405974,0,0,0.118905358595063,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227325515428431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30063005750822,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174907015344055,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353241705574528,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,-0.087428497801853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326725274005944,0,0,-0.127704215834526,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,1.73473483287855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00628225413826175,0.0211576327606583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.064556134960174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0.580335882294449,0,0,0,0,0,0,-0.239747892972746,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.157236414286507,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190324262888429,0,0,0,0.30090652711188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770789158311378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240229958625638,0,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0.190324262888429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136778899793095,0,0,-0.0422874684771159,0,0.0223980260842347,0,0,0,0,0,0,0.142829798169208,0,0,0,0,0,0,0,0,0,0.580335882294449,-0.0400762477245316,0,0,-0.137338502423895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.280072095322966,0,0,-0.397074688522015,0,0,-0.159299327969809,0,0,0,0,0,-0.174992895090299,-0.0197796071625984,0,0,0,0,0,0,0,0,0,0.580335882294449,0,0,0,0,-0.0108678062687227,0,0,0,-0.0568589461625992,-0.269475635594569,0,0.201499627944025,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869
|repeat_enrich_byname=0,0,0,0,0.282613174539152,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0.0506966195786965,0.242522477958452,-0.143515142523472,0,0,-0.427279086909571,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,0.088063679020906,0,-0.120879483793741,-0.0827201683234173,-0.0114340900650647,0.094625473269531,-0.055712496781182,0,0,0,-0.0743953358767915,0.265632678498494,0,0,0.395272040762185,0.00897464432776995,0,0,1.18255636156492,0,0.00237366447251353,0.571735610447195,0,-0.253729092362347,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.326988596678969,-0.02053172555047,0,0,0,0.145071103050889,0,0,-0.373286155956567,0.336287558131586,0,0.49482689332686,0,0.0782587987669449,0.0690350064175262,0.155749491972844,-0.16146461202624,0.432934032923311,-0.189981719549847,0.332955833111141,0.38591153114401,0.347960583718545,0.0774828963871083,0.417479955453205,0.184381207564714,0.514402177478508,0.0256771867187373,0,0,0,-0.18480790494298,0,0,-0.109466188699915,-0.204867941795651,0.250686484806793,0.263603836049082,0.120340786440756,0.053931818830004,-0.0395325284566706,-0.0767879271197366,0.0287783373295873,-0.0114824050873422,0.0403375611343915,0,0,0.0923172853138929,0.0342677325253927,0.100782523531781,0,-0.103328936034123,-0.0683442610773682,0,0.122402938657706,0.356274951745727,0,0,0.137831465839048,0,0,0,0,0,0.248054895879612,-0.158843617253308,0.347480320738904,0,0.099160415027597,-0.00355547336704759,0.0610182680026435,0,-0.263608791103677,-0.146009897457394,0,-0.281335920695988,0,0.113895246023524,0.207083879142127,0.231556324026064,0.397785034240978,-0.0584468268118252,-0.150136051481282,0.111799187882389,0.22386794565189,-0.0723311680797661,0.244317486518502,0.94597695255283,0,-0.16693605380792,-0.298849605844666,0.0855609972495107,0.541295764690314,0.380648525776858,-0.144845150771759,0,-0.624980238715314,0,0.404045461224512,0.363311996617,-0.0586408488038281,-0.578968406430662,0,0.332201024282729,1.28153964599119,0,0.328379556783423,0,0,0.230281442442219,0.336407818515535,-0.211650427864589,0.0513348062092344,0,-0.409431632612798,0,0,0.0660185237255439,-0.235476037764389,0,-0.0158139028765234,-0.0288670319189471,-0.223567515418436,0.264677452341924,0,0.011357626173421,0.0709083587177356,0,0.380648525776858,0.83570325054614,0,0.514449888873924,0.127322184290102,0.0484665541809155,-0.108622809454255,0,0,-0.177527765965176,0,-0.0182592191009169,0,0,0.330454585695626,0,0,0,0,-0.0284297732705203,0,0,0,0,0,0,0,-0.314350196339941,-0.354833330216448,0,0.535213816171499,0,0,0,0,0,0,0,0.380648525776858,-0.618533282510021,0.059644503487023,0.257631110100438,0,0,0,0,-0.215723402553475,-0.203236562094724,0.380648525776858,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,0.025544818786709,0,0,0,0.303381480692659,0,0,0,0,-0.170259866581196,0,0,-0.0515942910919308,0,0.363200804092747,0.299066646230017,0,-0.263287750358753,0.501239705850042,0.667929459264865,0,0,0.558832707842828,0,0,-1.03594432163325,-0.0823702229656663,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0.380648525776858,-0.079413690047393,-0.0922240566585104,0,0,0,0,0,0,0,0.266061918068321,-0.0267358888824715,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.338938626936356,0,0,0.103286393583344,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.0139263736721928,0,0,0,0,0,0,0,0.105815227570768,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496196419999148,0,0.0473679527972773,0.075914871768626,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,0.618650800442403,0,0,-0.0920328098005262,0,0,0,0,0,0,0.0926716851201485,0.283896206593131,0.188381255824973,0,0,0,0.135938690405974,0,0,0.118905358595063,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227325515428431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30063005750822,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174907015344055,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353241705574528,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,-0.087428497801853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326725274005944,0,0,-0.127704215834526,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,1.73473483287855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00628225413826175,0.0211576327606583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.064556134960174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0.580335882294449,0,0,0,0,0,0,-0.239747892972746,0,0,0,0,0.380648525776858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.157236414286507,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190324262888429,0,0,0,0.30090652711188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770789158311378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240229958625638,0,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0.190324262888429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136778899793095,0,0,-0.0422874684771159,0,0.0223980260842347,0,0,0,0,0,0,0.142829798169208,0,0,0,0,0,0,0,0,0,0.580335882294449,-0.0400762477245316,0,0,-0.137338502423895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.280072095322966,0,0,-0.397074688522015,0,0,-0.159299327969809,0,0,0,0,0,-0.174992895090299,-0.0197796071625984,0,0,0,0,0,0,0,0,0,0.580335882294449,0,0,0,0,-0.0108678062687227,0,0,0,-0.0568589461625992,-0.269475635594569,0,0.201499627944025,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869
Line 74: Line 82:
|rna_tube_id=120H8
|rna_tube_id=120H8
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.AGTTCC
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_category=primary cells
Line 97: Line 106:
|top_motifs=ZNF423:2.53205342179;RXRA_VDR{dimer}:1.77437877088;EBF1:1.70078054385;RXR{A,B,G}:1.69162435308;TFAP2{A,C}:1.67010903676;GLI1..3:1.62828583686;SPZ1:1.62442303293;GTF2A1,2:1.61264120938;ESR1:1.4595731688;GZF1:1.43438011552;TLX1..3_NFIC{dimer}:1.41781781947;SRF:1.33685823365;NR5A1,2:1.30153753844;ZNF148:1.27220320147;PPARG:1.25162775316;POU2F1..3:1.20736346318;PBX1:1.20515822991;XCPE1{core}:1.11298322623;TBP:1.10897172199;ESRRA:1.08251217381;bHLH_family:1.0816403223;HES1:1.03221211154;SOX{8,9,10}:1.02938599865;TFCP2:0.982780183881;IKZF1:0.945014758524;TFAP4:0.932202012186;NANOG:0.873757166523;SMAD1..7,9:0.85543934702;ZIC1..3:0.829249280446;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.800341920702;SOX17:0.775470792023;RREB1:0.769485765974;ZNF238:0.753122735603;LEF1_TCF7_TCF7L1,2:0.748781485653;NR3C1:0.747170857234;HOX{A5,B5}:0.70793294977;HIC1:0.668720997455;PAX1,9:0.660711914157;TAL1_TCF{3,4,12}:0.610611435178;ZBTB6:0.59442617461;LMO2:0.579599434754;TFAP2B:0.572854973255;REST:0.565230378025;TEAD1:0.564164466107;CRX:0.554482256341;ONECUT1,2:0.53726690489;AR:0.524746323724;NR6A1:0.511753887934;GTF2I:0.498897208859;PATZ1:0.459722740718;HNF4A_NR2F1,2:0.45822334503;SP1:0.400095141315;HAND1,2:0.397314618209;ETS1,2:0.391385314908;MYOD1:0.356695687559;GATA6:0.345681027125;GFI1B:0.342640757981;PAX8:0.334470508402;GCM1,2:0.329667851426;NKX2-3_NKX2-5:0.306013427097;MEF2{A,B,C,D}:0.304817435287;TP53:0.26035069779;GFI1:0.247066858521;NKX3-2:0.243652750999;BACH2:0.211058339055;POU3F1..4:0.207751904623;TOPORS:0.181929175572;NFE2:0.175695091455;FOSL2:0.161661532905;STAT2,4,6:0.153067232946;NFE2L2:0.15270893705;NFATC1..3:0.142202991568;FOXL1:0.129839392173;NFE2L1:0.126617334217;MED-1{core}:0.123580727463;MAFB:0.12188040716;HLF:0.120976522806;UFEwm:0.116814834084;HIF1A:0.102634227651;FOS_FOS{B,L1}_JUN{B,D}:0.0770760953391;MZF1:0.0683307775901;VSX1,2:0.0634385796403;KLF4:0.0533471039302;SOX2:0.0500045034466;NFKB1_REL_RELA:0.0344247221305;LHX3,4:0.0292992033116;SPIB:0.0103798213407;PAX5:0.0102166949832;ARID5B:-0.00133933116921;HNF1A:-0.0228673445319;XBP1:-0.0299828253302;PAX6:-0.0345415001102;RUNX1..3:-0.0731808725115;MTF1:-0.0777447649528;POU6F1:-0.0999439071224;PITX1..3:-0.102972399656;MAZ:-0.127202710242;FOXM1:-0.149963201512;TFDP1:-0.18082718517;MTE{core}:-0.227486267762;SPI1:-0.252676629223;CDC5L:-0.262510992811;FOX{F1,F2,J1}:-0.267863651503;JUN:-0.268089848661;HMX1:-0.280220737356;NHLH1,2:-0.285066269416;MYB:-0.289678609828;PAX3,7:-0.2989320841;RORA:-0.302535829403;PRRX1,2:-0.321068784862;HSF1,2:-0.323489909937;NFIX:-0.335292133202;TBX4,5:-0.342944018651;NFY{A,B,C}:-0.344665684774;E2F1..5:-0.365546860002;PRDM1:-0.367425058903;CEBPA,B_DDIT3:-0.38035914105;RFX1:-0.381395089535;ZNF384:-0.385231433724;CUX2:-0.388294136747;ALX1:-0.397059563225;SOX5:-0.416933994953;TEF:-0.427125522085;AHR_ARNT_ARNT2:-0.431390601254;MYFfamily:-0.431551616561;EGR1..3:-0.441862912057;NKX2-2,8:-0.445415678848;SNAI1..3:-0.467805108225;FOX{I1,J2}:-0.4743084671;NANOG{mouse}:-0.475082593536;STAT5{A,B}:-0.485352165749;IKZF2:-0.489066627466;ZFP161:-0.495133145771;BREu{core}:-0.51321740356;POU5F1:-0.525816676414;ATF6:-0.529548204857;ATF2:-0.54805561825;FOX{D1,D2}:-0.553068570925;HOXA9_MEIS1:-0.55624299812;POU1F1:-0.579669535393;HOX{A6,A7,B6,B7}:-0.595180555039;HOX{A4,D4}:-0.603099645463;OCT4_SOX2{dimer}:-0.604896945866;EP300:-0.607176845547;ALX4:-0.608341053333;PAX2:-0.609005581221;ZEB1:-0.617874218227;NFIL3:-0.664079789035;TLX2:-0.69718726696;DBP:-0.716418921053;EVI1:-0.727236739574;NKX3-1:-0.73724097266;FOXP3:-0.751455911139;GATA4:-0.759035544427;ELF1,2,4:-0.800898351353;FOXQ1:-0.815540827698;FOXA2:-0.820107502279;ZNF143:-0.847752697623;MYBL2:-0.868140994618;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.881519741953;IRF1,2:-0.892645852201;ATF4:-0.906104967931;RBPJ:-0.910076562088;NKX2-1,4:-0.920641489484;CDX1,2,4:-0.925266854492;ADNP_IRX_SIX_ZHX:-0.931292888581;EN1,2:-0.936826098084;FOXD3:-0.962422535705;DMAP1_NCOR{1,2}_SMARC:-0.991204110094;NR1H4:-1.00981066112;HBP1_HMGB_SSRP1_UBTF:-1.08224648987;TGIF1:-1.10913165818;T:-1.13024770957;CREB1:-1.14225038091;IRF7:-1.16486898864;FOXP1:-1.19129346635;YY1:-1.23427147816;PAX4:-1.26453724529;FOXO1,3,4:-1.27051147556;NRF1:-1.281130612;ATF5_CREB3:-1.29561378056;HMGA1,2:-1.31799395319;ZBTB16:-1.41430434161;AIRE:-1.41852784223;RFX2..5_RFXANK_RFXAP:-1.45698316545;SREBF1,2:-1.64534122891;STAT1,3:-1.65025867123;BPTF:-1.6753579504;NKX6-1,2:-1.68644214645;PDX1:-1.95357524526;ELK1,4_GABP{A,B1}:-2.2081001702;FOXN1:-2.63768089695
|top_motifs=ZNF423:2.53205342179;RXRA_VDR{dimer}:1.77437877088;EBF1:1.70078054385;RXR{A,B,G}:1.69162435308;TFAP2{A,C}:1.67010903676;GLI1..3:1.62828583686;SPZ1:1.62442303293;GTF2A1,2:1.61264120938;ESR1:1.4595731688;GZF1:1.43438011552;TLX1..3_NFIC{dimer}:1.41781781947;SRF:1.33685823365;NR5A1,2:1.30153753844;ZNF148:1.27220320147;PPARG:1.25162775316;POU2F1..3:1.20736346318;PBX1:1.20515822991;XCPE1{core}:1.11298322623;TBP:1.10897172199;ESRRA:1.08251217381;bHLH_family:1.0816403223;HES1:1.03221211154;SOX{8,9,10}:1.02938599865;TFCP2:0.982780183881;IKZF1:0.945014758524;TFAP4:0.932202012186;NANOG:0.873757166523;SMAD1..7,9:0.85543934702;ZIC1..3:0.829249280446;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.800341920702;SOX17:0.775470792023;RREB1:0.769485765974;ZNF238:0.753122735603;LEF1_TCF7_TCF7L1,2:0.748781485653;NR3C1:0.747170857234;HOX{A5,B5}:0.70793294977;HIC1:0.668720997455;PAX1,9:0.660711914157;TAL1_TCF{3,4,12}:0.610611435178;ZBTB6:0.59442617461;LMO2:0.579599434754;TFAP2B:0.572854973255;REST:0.565230378025;TEAD1:0.564164466107;CRX:0.554482256341;ONECUT1,2:0.53726690489;AR:0.524746323724;NR6A1:0.511753887934;GTF2I:0.498897208859;PATZ1:0.459722740718;HNF4A_NR2F1,2:0.45822334503;SP1:0.400095141315;HAND1,2:0.397314618209;ETS1,2:0.391385314908;MYOD1:0.356695687559;GATA6:0.345681027125;GFI1B:0.342640757981;PAX8:0.334470508402;GCM1,2:0.329667851426;NKX2-3_NKX2-5:0.306013427097;MEF2{A,B,C,D}:0.304817435287;TP53:0.26035069779;GFI1:0.247066858521;NKX3-2:0.243652750999;BACH2:0.211058339055;POU3F1..4:0.207751904623;TOPORS:0.181929175572;NFE2:0.175695091455;FOSL2:0.161661532905;STAT2,4,6:0.153067232946;NFE2L2:0.15270893705;NFATC1..3:0.142202991568;FOXL1:0.129839392173;NFE2L1:0.126617334217;MED-1{core}:0.123580727463;MAFB:0.12188040716;HLF:0.120976522806;UFEwm:0.116814834084;HIF1A:0.102634227651;FOS_FOS{B,L1}_JUN{B,D}:0.0770760953391;MZF1:0.0683307775901;VSX1,2:0.0634385796403;KLF4:0.0533471039302;SOX2:0.0500045034466;NFKB1_REL_RELA:0.0344247221305;LHX3,4:0.0292992033116;SPIB:0.0103798213407;PAX5:0.0102166949832;ARID5B:-0.00133933116921;HNF1A:-0.0228673445319;XBP1:-0.0299828253302;PAX6:-0.0345415001102;RUNX1..3:-0.0731808725115;MTF1:-0.0777447649528;POU6F1:-0.0999439071224;PITX1..3:-0.102972399656;MAZ:-0.127202710242;FOXM1:-0.149963201512;TFDP1:-0.18082718517;MTE{core}:-0.227486267762;SPI1:-0.252676629223;CDC5L:-0.262510992811;FOX{F1,F2,J1}:-0.267863651503;JUN:-0.268089848661;HMX1:-0.280220737356;NHLH1,2:-0.285066269416;MYB:-0.289678609828;PAX3,7:-0.2989320841;RORA:-0.302535829403;PRRX1,2:-0.321068784862;HSF1,2:-0.323489909937;NFIX:-0.335292133202;TBX4,5:-0.342944018651;NFY{A,B,C}:-0.344665684774;E2F1..5:-0.365546860002;PRDM1:-0.367425058903;CEBPA,B_DDIT3:-0.38035914105;RFX1:-0.381395089535;ZNF384:-0.385231433724;CUX2:-0.388294136747;ALX1:-0.397059563225;SOX5:-0.416933994953;TEF:-0.427125522085;AHR_ARNT_ARNT2:-0.431390601254;MYFfamily:-0.431551616561;EGR1..3:-0.441862912057;NKX2-2,8:-0.445415678848;SNAI1..3:-0.467805108225;FOX{I1,J2}:-0.4743084671;NANOG{mouse}:-0.475082593536;STAT5{A,B}:-0.485352165749;IKZF2:-0.489066627466;ZFP161:-0.495133145771;BREu{core}:-0.51321740356;POU5F1:-0.525816676414;ATF6:-0.529548204857;ATF2:-0.54805561825;FOX{D1,D2}:-0.553068570925;HOXA9_MEIS1:-0.55624299812;POU1F1:-0.579669535393;HOX{A6,A7,B6,B7}:-0.595180555039;HOX{A4,D4}:-0.603099645463;OCT4_SOX2{dimer}:-0.604896945866;EP300:-0.607176845547;ALX4:-0.608341053333;PAX2:-0.609005581221;ZEB1:-0.617874218227;NFIL3:-0.664079789035;TLX2:-0.69718726696;DBP:-0.716418921053;EVI1:-0.727236739574;NKX3-1:-0.73724097266;FOXP3:-0.751455911139;GATA4:-0.759035544427;ELF1,2,4:-0.800898351353;FOXQ1:-0.815540827698;FOXA2:-0.820107502279;ZNF143:-0.847752697623;MYBL2:-0.868140994618;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.881519741953;IRF1,2:-0.892645852201;ATF4:-0.906104967931;RBPJ:-0.910076562088;NKX2-1,4:-0.920641489484;CDX1,2,4:-0.925266854492;ADNP_IRX_SIX_ZHX:-0.931292888581;EN1,2:-0.936826098084;FOXD3:-0.962422535705;DMAP1_NCOR{1,2}_SMARC:-0.991204110094;NR1H4:-1.00981066112;HBP1_HMGB_SSRP1_UBTF:-1.08224648987;TGIF1:-1.10913165818;T:-1.13024770957;CREB1:-1.14225038091;IRF7:-1.16486898864;FOXP1:-1.19129346635;YY1:-1.23427147816;PAX4:-1.26453724529;FOXO1,3,4:-1.27051147556;NRF1:-1.281130612;ATF5_CREB3:-1.29561378056;HMGA1,2:-1.31799395319;ZBTB16:-1.41430434161;AIRE:-1.41852784223;RFX2..5_RFXANK_RFXAP:-1.45698316545;SREBF1,2:-1.64534122891;STAT1,3:-1.65025867123;BPTF:-1.6753579504;NKX6-1,2:-1.68644214645;PDX1:-1.95357524526;ELK1,4_GABP{A,B1}:-2.2081001702;FOXN1:-2.63768089695
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11601-120H8;search_select_hide=table117:FF:11601-120H8
}}
}}

Latest revision as of 18:11, 4 June 2020

Name:Hepatic Sinusoidal Endothelial Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12092
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueliver
dev stageNA
sexNA
ageNA
cell typehepatic sinusoidal endothelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:sc05
catalog numberSC5005
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004955
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12092 CAGE DRX008302 DRR009174
Accession ID Hg19

Library idBAMCTSS
CNhs12092 DRZ000599 DRZ001984
Accession ID Hg38

Library idBAMCTSS
CNhs12092 DRZ011949 DRZ013334
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004955
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.AGTTCC sRNA-Seq DRX037119 DRR041485
Accession ID Hg19

Library idBAMCTSS
SRhi10008.AGTTCC DRZ007127


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12092



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12092



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12092


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000215 (barrier cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000182 (hepatocyte)
0002262 (endothelial cell of sinusoid)
1000398 (endothelial cell of hepatic sinusoid)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0001007 (digestive system)
0000055 (vessel)
0001281 (hepatic sinusoid)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0000353 (parenchyma)
0003497 (abdomen blood vessel)
0003909 (sinusoid)
0005177 (trunk region element)
0002365 (exocrine gland)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0005172 (abdomen element)
0006925 (digestive gland)
0002049 (vasculature)
0002530 (gland)
0003835 (abdominal segment blood vessel)
0003513 (trunk blood vessel)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0005173 (abdominal segment element)
0004535 (cardiovascular system)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0001280 (liver parenchyma)
0004647 (liver lobule)
0002330 (exocrine system)
0004537 (blood vasculature)
0000916 (abdomen)
0002423 (hepatobiliary system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000076 (hepatic sinusoidal endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)
CL:0000223 (endodermal cell)