FFCP PHASE1:Hg19::chr11:61583926..61583940,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61583926..61583940,+ to FFCP PHASE1:Hg19::chr11:61583926..61583940,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9415 | |EntrezGene=9415 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3575 | |HGNC=3575 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z634 | |UniProt=B7Z634 | ||
|association_with_transcript=50bp_to_ENST00000522056,uc010rlo.1_5end | |||
|cluster_id=chr11:61583926..61583940,+ | |||
|description=CAGE_peak_11_at_FADS2_5end | |||
|id=chr11:61583926..61583940,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.79e-35!254;CL:0002321!1.50e-13!248;CL:0000220!7.21e-13!246;CL:0000221!3.69e-09!71;CL:0000076!2.25e-08!62;CL:0002159!2.43e-08!13;CL:0000223!5.53e-08!59;CL:0002076!2.12e-07!43;CL:0002077!5.43e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.39e-11;13!CL:1000507;4.68e-09;10!CL:1000494;4.68e-09;10!CL:0000240;1.58e-08;6!CL:0000311;1.58e-08;6!CL:0000079;1.58e-08;6!CL:0000237;1.58e-08;6!CL:1000497;4.59e-08;17!CL:0002518;4.59e-08;17!CL:0002202;7.07e-08;9!CL:0002632;7.07e-08;9!CL:1000449;1.80e-07;15!CL:0000312;5.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-32,253;CL:0002368,2.51e-11,13;CL:1000507,2.34e-09,10;CL:1000494,2.34e-09,10;CL:0000240,2.11e-08,6;CL:0000311,2.11e-08,6;CL:0000079,2.11e-08,6;CL:0000237,2.11e-08,6;CL:0000036,2.11e-08,6;CL:0000357,2.11e-08,6;CL:0000114,2.11e-08,6;CL:1000497,3.66e-08,17;CL:0002518,3.66e-08,17;CL:0002202,4.37e-08,9;CL:0002632,4.37e-08,9;CL:1000449,1.17e-07,15;CL:0000239,5.36e-07,3;CL:1000615,5.36e-07,3;CL:0002306,5.36e-07,3;CL:0000312,6.92e-07,5;CL:0000068,8.24e-07,3;CL:0000069,8.24e-07,3;CL:0000307,8.24e-07,3;CL:0000377,8.24e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.94e-12;29!CL:0000357;1.58e-08;6!CL:0000114;1.58e-08;6 | |||
|ontology_enrichment_disease=DOID:305!1.87e-16!106;DOID:0050687!1.07e-14!143;DOID:162!9.09e-10!235;DOID:14566!2.15e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.49e-12,106;DOID:0050687,8.75e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0000064!2.86e-10!219;UBERON:0000063!2.63e-09!97;UBERON:0001737!1.09e-08!9;UBERON:0004121!1.56e-08!169;UBERON:0000475!3.27e-08!365;UBERON:0005085!5.25e-08!29;UBERON:0008947!5.46e-08!38;UBERON:0003258!5.46e-08!38;UBERON:0000924!9.79e-08!173;UBERON:0006601!9.79e-08!173;UBERON:0000483!1.68e-07!309;UBERON:0000119!1.76e-07!312;UBERON:0000065!2.27e-07!53;UBERON:0001048!2.77e-07!168;UBERON:0000481!3.22e-07!347;UBERON:0001004!4.44e-07!72;UBERON:0000019!7.10e-07!19;UBERON:0000047!7.10e-07!19;UBERON:0004088!7.10e-07!19;UBERON:0003072!7.10e-07!19;UBERON:0003071!7.10e-07!19;UBERON:0004128!7.10e-07!19;UBERON:0000033!8.99e-07!123;UBERON:0002104!9.25e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.89e-20;9!UBERON:0001557;1.89e-20;9!UBERON:0000072;1.00e-14;37!UBERON:0000065;1.41e-14;44!UBERON:0006554;2.88e-13;30!UBERON:0001008;2.88e-13;30!UBERON:0002113;2.43e-09;24!UBERON:0011143;2.43e-09;24!UBERON:0004211;4.68e-09;10!UBERON:0009773;4.68e-09;10!UBERON:0001231;4.68e-09;10!UBERON:0004810;4.68e-09;10!UBERON:0000489;1.31e-08;29!UBERON:0001004;8.57e-08;65!UBERON:0006555;1.80e-07;15!UBERON:0004819;1.80e-07;15!UBERON:0001285;1.80e-07;15!UBERON:0007684;1.80e-07;15!UBERON:0000365;5.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.97e-20,9;UBERON:0008947,3.89e-16,38;UBERON:0003258,3.89e-16,38;UBERON:0000065,1.69e-13,54;UBERON:0000072,5.24e-12,47;UBERON:0001004,3.01e-10,74;UBERON:0006554,1.39e-09,47;UBERON:0004810,2.34e-09,10;UBERON:0001008,2.73e-09,48;UBERON:0002113,1.39e-08,26;UBERON:0003918,1.39e-08,26;UBERON:0011143,1.39e-08,26;UBERON:0005095,1.39e-08,26;UBERON:0007687,1.39e-08,26;UBERON:0001557,1.61e-08,19;UBERON:0000489,5.09e-08,31;UBERON:0004211,1.17e-07,15;UBERON:0009773,1.17e-07,15;UBERON:0001231,1.17e-07,15;UBERON:0001285,1.17e-07,15;UBERON:0007684,1.17e-07,15;UBERON:0004208,1.17e-07,15;UBERON:0009569,1.66e-07,112;UBERON:0000365,3.53e-07,5;UBERON:0006555,4.35e-07,16;UBERON:0004819,4.35e-07,16;UBERON:0006853,5.36e-07,3;UBERON:0007685,5.36e-07,3;UBERON:0004134,5.36e-07,3;UBERON:0005177,8.93e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,2.40285509343189,1.05506791291381,0,0,0,0.602694528023977,0,0,0.861847406537515,0.408001382488506,0.313454721478088,0,0.958120975510189,0.502170558379211,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,3.31326510656075,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.567208902984407,0.443458794925128,0.614843499851882,0.0654895377488563,3.64295288292542,3.70784442784429,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.673588117878509,0.563057402416611,0,0.949265659568129,0,0,0,3.05265836499774,0,0,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,1.1409436430889,0,0.23486899728753,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,0.103325781175765,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.250237039743928,0,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0.339121184620975,1.15956511897978,0.818238361772504,0.573609190778008,0.975789649036763,1.45782745153634,1.2781333715647,1.14027160516907,0.504641701751257,0.72995471815166,0,0,0,0.464367928031979,0,4.37735160147422,3.37169380156203,3.37415441836875,4.52205288202815,2.17879444092406,4.27087114399974,2.69662616320329,5.69042248863504,3.07797725557112,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.614942192715568,0.514703430895577,1.09750285408626,3.37205259772859,2.21163739305588,1.29623823221941,0,1.03993478527958,2.88662684050547,0.927443239800615,0.234817388471643,0.433099343283221,0.462985512576611,0,1.58040879591855,2.57545848628462,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,1.52249488594842,1.74380363108377,0.766765358330422,0,0.352193736052904,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0,1.74384027533312,0,0.258543431515556,3.57656445851882,0,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0,0,1.5119514666484,0,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.40101294060657,0.644566922551274,0,0,0,0,1.69433741629712,3.13739907670742,0,1.37217117560738,0,0.510281115829547,0.431831832204279,0,1.35473218771926,0,2.03901018436031,1.66215201785745,1.79099803777743,0,0,0.769350375349168,1.64007322849853,0,0,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0.616194468458578,0.460511024178389,0,0,0,0.340906509664404,0.445160178233687,2.14870389969272,0.576570202095319,1.27612712494584,1.0115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0.767693373934002,0,0.636406495851874,0,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.430234056612155,0.196498082026242,0.7133421029625,0,0,0,0.379473173765715,0.699869440489966,1.92444225451024,2.68120910214315,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,3.99087138183008,2.29723400206959,0,0,0,0,0,0,0,0,1.81600920916704,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.422250816255987,0,0,0.251932747854276,1.02268682502155,0,0,1.07842021376792,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0.260427761085233,1.39935999993913,0,0.1137934482855,1.5255219017566,0,0.689486746482929,0,0.173624994933292,0,0.120596438625408,3.05163472634166,0.110579259931225,0,0,0.544692317594951,0.557694977114413,0,0.113942055847001,1.1528195219403,0.718061155278177,0.977826347298073,0.957003479195758,0.183195186803725,0,0,0,0,1.57916962432026,0.784250137270958,0.335643173951685,0,0,1.47698645169619,0.816164040795739,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.728341138602278,0.394584402849391,0,0,0,0.300646838828985,0.414752765588989,0,0,0,0,0.284609546029793,0,0.347119476670262,0.293977192243133,2.00236175134926,0.17472666824203,0.343972064943233,3.19295893253981,2.92357268344742,2.54557916864949,0.290967049465258,0.79430514022350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| ||
|short_description=p11@FADS2 | |||
}} | }} |
Latest revision as of 17:05, 18 September 2015
Short description: | p11@FADS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FADS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000522056, uc010rlo.1_5end |
EntrezGene: | FADS2 |
HGNC: | 3575 |
UniProt: | B7Z634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.62e-32 | 253 |
respiratory epithelial cell | 2.51e-11 | 13 |
kidney tubule cell | 2.34e-09 | 10 |
nephron tubule epithelial cell | 2.34e-09 | 10 |
stratified squamous epithelial cell | 2.11e-08 | 6 |
keratin accumulating cell | 2.11e-08 | 6 |
stratified epithelial cell | 2.11e-08 | 6 |
keratinizing barrier epithelial cell | 2.11e-08 | 6 |
epithelial fate stem cell | 2.11e-08 | 6 |
stratified epithelial stem cell | 2.11e-08 | 6 |
surface ectodermal cell | 2.11e-08 | 6 |
kidney cell | 3.66e-08 | 17 |
kidney epithelial cell | 3.66e-08 | 17 |
epithelial cell of tracheobronchial tree | 4.37e-08 | 9 |
epithelial cell of lower respiratory tract | 4.37e-08 | 9 |
epithelial cell of nephron | 1.17e-07 | 15 |
brush border epithelial cell | 5.36e-07 | 3 |
kidney cortex tubule cell | 5.36e-07 | 3 |
epithelial cell of proximal tubule | 5.36e-07 | 3 |
keratinocyte | 6.92e-07 | 5 |
duct epithelial cell | 8.24e-07 | 3 |
branched duct epithelial cell | 8.24e-07 | 3 |
tracheal epithelial cell | 8.24e-07 | 3 |
tracheoblast | 8.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.97e-20 | 9 |
respiratory primordium | 3.89e-16 | 38 |
endoderm of foregut | 3.89e-16 | 38 |
respiratory tract | 1.69e-13 | 54 |
segment of respiratory tract | 5.24e-12 | 47 |
respiratory system | 3.01e-10 | 74 |
urinary system structure | 1.39e-09 | 47 |
nephron tubule epithelium | 2.34e-09 | 10 |
renal system | 2.73e-09 | 48 |
kidney | 1.39e-08 | 26 |
kidney mesenchyme | 1.39e-08 | 26 |
upper urinary tract | 1.39e-08 | 26 |
kidney rudiment | 1.39e-08 | 26 |
kidney field | 1.39e-08 | 26 |
upper respiratory tract | 1.61e-08 | 19 |
cavitated compound organ | 5.09e-08 | 31 |
nephron epithelium | 1.17e-07 | 15 |
renal tubule | 1.17e-07 | 15 |
nephron tubule | 1.17e-07 | 15 |
nephron | 1.17e-07 | 15 |
uriniferous tubule | 1.17e-07 | 15 |
nephrogenic mesenchyme | 1.17e-07 | 15 |
subdivision of trunk | 1.66e-07 | 112 |
urothelium | 3.53e-07 | 5 |
excretory tube | 4.35e-07 | 16 |
kidney epithelium | 4.35e-07 | 16 |
renal cortex tubule | 5.36e-07 | 3 |
region of nephron tubule | 5.36e-07 | 3 |
proximal tubule | 5.36e-07 | 3 |
trunk region element | 8.93e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.49e-12 | 106 |
cell type cancer | 8.75e-10 | 143 |