FFCP PHASE1:Hg19::chr15:86123810..86123823,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:86123810..86123823,+ to FFCP PHASE1:Hg19::chr15:86123810..86123823,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11214 | |EntrezGene=11214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=371 | |HGNC=371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_BC000269_5end | |||
|cluster_id=chr15:86123810..86123823,+ | |||
|description=CAGE_peak_27_at_AKAP13_5end | |||
|id=chr15:86123810..86123823,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.47e-47!42;CL:0000557!6.07e-46!71;CL:0000766!2.33e-45!76;CL:0000860!2.24e-43!45;CL:0000839!1.62e-40!70;CL:0002009!2.15e-38!65;CL:0002194!6.47e-36!63;CL:0000576!6.47e-36!63;CL:0000040!6.47e-36!63;CL:0000559!6.47e-36!63;CL:0000763!4.98e-34!112;CL:0000049!4.98e-34!112;CL:0000738!1.66e-31!140;CL:0002031!3.51e-24!124;CL:0000037!2.71e-23!172;CL:0000566!2.71e-23!172;CL:0002032!2.67e-22!165;CL:0000837!2.67e-22!165;CL:0000988!8.56e-21!182;CL:0002087!1.17e-20!119;CL:0000990!3.39e-11!8;CL:0000451!9.28e-09!10;CL:0002274!2.05e-08!5;CL:0000457!2.05e-08!5;CL:0002191!2.05e-08!5;CL:0000097!2.05e-08!5;CL:0000831!2.05e-08!5;CL:0002028!2.05e-08!5;CL:0000453!9.24e-08!5;CL:0000840!9.55e-08!5;CL:0001029!9.55e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-69;33!CL:0002057;1.58e-69;33!CL:0000473;2.55e-51;39!CL:0000234;2.55e-51;39!CL:0000576;1.02e-38;48!CL:0000766;1.24e-31;69!CL:0000763;5.83e-15;100!CL:0000097;6.25e-12;5!CL:0000738;2.79e-11;136!CL:0000453;1.26e-10;5!CL:0002087;4.74e-09;104!CL:0000990;9.42e-09;8!CL:0001014;8.64e-08;2!CL:0001016;8.64e-08;2!CL:0000451;4.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-72,42;CL:0002057,2.21e-72,42;CL:0000557,3.21e-72,67;CL:0000766,8.80e-67,72;CL:0000473,2.72e-66,48;CL:0000234,2.72e-66,48;CL:0000839,3.03e-62,66;CL:0002009,8.71e-60,61;CL:0002194,1.22e-54,59;CL:0000576,1.22e-54,59;CL:0000040,1.22e-54,59;CL:0000559,1.22e-54,59;CL:0000763,1.31e-53,108;CL:0000049,1.31e-53,108;CL:0000738,2.06e-38,136;CL:0002031,4.10e-34,120;CL:0002032,1.96e-32,161;CL:0000837,1.96e-32,161;CL:0000037,1.25e-30,168;CL:0000988,1.60e-28,177;CL:0002087,5.27e-24,115;CL:0000097,5.32e-12,5;CL:0002028,5.32e-12,5;CL:0000453,1.35e-10,5;CL:0000134,6.47e-09,354;CL:0000990,9.95e-09,8;CL:0002320,1.53e-08,361;CL:0001014,7.70e-08,2;CL:0001016,7.70e-08,2;CL:0000219,3.09e-07,386;CL:0000451,4.40e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-52;42!CL:0000049;3.44e-15;108!UBERON:0005062;9.37e-08;4!UBERON:0007284;9.37e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.96e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.07e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.14e-38!80;UBERON:0002390!2.35e-35!102;UBERON:0003061!2.35e-35!102;UBERON:0001474!1.12e-34!86;UBERON:0002193!2.15e-30!112;UBERON:0004765!7.89e-27!101;UBERON:0001434!7.89e-27!101;UBERON:0002405!1.25e-26!115;UBERON:0003081!7.85e-20!216;UBERON:0002204!5.00e-13!167;UBERON:0007023!1.26e-09!115;UBERON:0000926!2.24e-07!448;UBERON:0004120!2.24e-07!448;UBERON:0006603!2.24e-07!448;UBERON:0000062!3.40e-07!511;UBERON:0007100!8.86e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.36e-10;3!UBERON:0000946;3.36e-10;3!UBERON:0002133;1.89e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-62,76;UBERON:0001474,2.69e-57,82;UBERON:0004765,2.38e-51,90;UBERON:0002405,2.21e-49,93;UBERON:0002390,2.30e-46,98;UBERON:0003061,2.30e-46,98;UBERON:0001434,3.05e-45,100;UBERON:0002193,3.64e-41,108;UBERON:0003081,2.35e-26,203;UBERON:0002204,5.75e-26,167;UBERON:0000926,7.25e-14,315;UBERON:0004120,7.25e-14,315;UBERON:0006603,7.25e-14,315;UBERON:0003978,2.92e-10,3;UBERON:0009751,2.92e-10,3;UBERON:0000946,2.92e-10,3;UBERON:0002523,2.92e-10,3;UBERON:0005983,2.92e-10,3;UBERON:0002165,2.92e-10,3;UBERON:0002062,2.92e-10,3;UBERON:0007280,2.92e-10,3;UBERON:0002384,4.91e-08,371;UBERON:0002133,2.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,1.39334510984468,0,0,0,0,0,0,2.76997704265939,3.00816671205213,1.08505435357926,0,0,0.515151135268373,1.30858414901608,1.13362783106643,1.94067248950253,1.85943229524548,2.05583944010913,2.78735733805593,0.28769239232215,0.512321413058201,1.89185783910868,2.06847408441971,1.29096936716765,1.35426486594342,3.57660445130949,3.27487380069415,3.59557575112135,2.75475503133812,4.8139354061414,3.19668562899521,2.30895910130701,1.79517291859469,2.55734850319616,1.7412554317715,2.8369261234557,1.86846674698672,1.25624332628372,2.08593167368081,2.6062661364614,2.42159801053347,3.31449872388808,1.89877432464531,0.211255286311942,0,0,1.57260083605093,0.450530678524519,0.48217676009124,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.132957960518865,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.616339038092582,6.42717158176393,18.3032340839541,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.960548020230999,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,2.41981432097328,0,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,2.23425921017803,1.60412296808179,1.43574604915363,4.19325901047881,12.4475553959606,4.46342914883745,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,7.87408620430252,1.5476039091159,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,3.97255182219259,0,0,0,0,0,0,0,0,0.732761168390412,0,0.258565912723101,0,0,0,0.640724475406168,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,1.19578356282027,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,10.9411961572633,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,2.11693525095465,0,0,0,0,0.098150233615243,0.487671699929078,1.29485767437579,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,1.389134845943,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,4.69281884806909,0.244482888365733,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,1.39334510984468,0,0,0,0,0,0,2.76997704265939,3.00816671205213,1.08505435357926,0,0,0.515151135268373,1.30858414901608,1.13362783106643,1.94067248950253,1.85943229524548,2.05583944010913,2.78735733805593,0.28769239232215,0.512321413058201,1.89185783910868,2.06847408441971,1.29096936716765,1.35426486594342,3.57660445130949,3.27487380069415,3.59557575112135,2.75475503133812,4.8139354061414,3.19668562899521,2.30895910130701,1.79517291859469,2.55734850319616,1.7412554317715,2.8369261234557,1.86846674698672,1.25624332628372,2.08593167368081,2.6062661364614,2.42159801053347,3.31449872388808,1.89877432464531,0.211255286311942,0,0,1.57260083605093,0.450530678524519,0.48217676009124,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.132957960518865,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.616339038092582,6.42717158176393,18.3032340839541,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.960548020230999,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0.789168805698781,2.41981432097328,0,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,2.23425921017803,1.60412296808179,1.43574604915363,4.19325901047881,12.4475553959606,4.46342914883745,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,7.87408620430252,1.5476039091159,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,3.97255182219259,0,0,0,0,0,0,0,0,0.732761168390412,0,0.258565912723101,0,0,0,0.640724475406168,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,1.19578356282027,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,10.9411961572633,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,2.11693525095465,0,0,0,0,0.098150233615243,0.487671699929078,1.29485767437579,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,1.389134845943,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,4.69281884806909,0.244482888365733,0,0,0.603821380773079,0 | ||
|short_description=p27@AKAP13 | |||
}} | }} |
Latest revision as of 13:53, 19 September 2015
Short description: | p27@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_AKAP13_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_BC000269_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-62 | 76 |
bone element | 2.69e-57 | 82 |
skeletal element | 2.38e-51 | 90 |
immune system | 2.21e-49 | 93 |
hematopoietic system | 2.30e-46 | 98 |
blood island | 2.30e-46 | 98 |
skeletal system | 3.05e-45 | 100 |
hemolymphoid system | 3.64e-41 | 108 |
lateral plate mesoderm | 2.35e-26 | 203 |
musculoskeletal system | 5.75e-26 | 167 |
mesoderm | 7.25e-14 | 315 |
mesoderm-derived structure | 7.25e-14 | 315 |
presumptive mesoderm | 7.25e-14 | 315 |
valve | 2.92e-10 | 3 |
cardiac mesenchyme | 2.92e-10 | 3 |
cardial valve | 2.92e-10 | 3 |
tunica intima | 2.92e-10 | 3 |
heart layer | 2.92e-10 | 3 |
endocardium | 2.92e-10 | 3 |
endocardial cushion | 2.92e-10 | 3 |
presumptive endocardium | 2.92e-10 | 3 |
connective tissue | 4.91e-08 | 371 |
atrioventricular valve | 2.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.07e-08 | 2 |