FFCP PHASE1:Hg19::chr1:204463061..204463102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:204463061..204463102,- to FFCP PHASE1:Hg19::chr1:204463061..204463102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:204463061..204463102,- | |||
|description=CAGE_peak_at_chr1:204463061..204463102,- | |||
|id=chr1:204463061..204463102,- | |||
|ontology_enrichment_celltype=CL:0002139!4.23e-12!24;CL:0000071!1.18e-11!18;CL:0002546!1.18e-11!18;CL:0000115!3.19e-09!35;CL:0002274!8.37e-09!5;CL:0000457!8.37e-09!5;CL:0002191!8.37e-09!5;CL:0000097!8.37e-09!5;CL:0000831!8.37e-09!5;CL:0002028!8.37e-09!5;CL:1000413!8.82e-08!9;CL:0002078!4.51e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.11e-37;5!CL:0000163;1.57e-20;9!CL:0002262;1.93e-15;2!CL:1000398;1.93e-15;2!CL:0000071;8.91e-14;18!CL:1000413;5.83e-13;9!CL:0002618;2.26e-10;3!CL:0002139;3.29e-10;24!CL:0000115;3.44e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.66e-37,5;CL:0002028,2.66e-37,5;CL:0000163,1.10e-20,9;CL:0002262,1.45e-15,2;CL:1000398,1.45e-15,2;CL:0000071,6.78e-14,18;CL:0002546,6.78e-14,18;CL:1000413,5.32e-13,9;CL:0000115,1.07e-11,36;CL:0002618,1.48e-10,3;CL:0002139,2.69e-10,24;CL:0002078,3.90e-09,45;CL:0000213,7.68e-07,58;CL:0000215,7.68e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;8.91e-14;18!UBERON:0006242;2.12e-08;1!UBERON:0005425;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-15!115;UBERON:0001986!1.18e-11!18;UBERON:0004638!1.18e-11!18;UBERON:0004852!1.18e-11!18;UBERON:0000487!3.36e-10!22;UBERON:0006914!1.80e-08!25;UBERON:0003915!8.82e-08!9;UBERON:0004700!8.82e-08!9;UBERON:0001917!8.82e-08!9;UBERON:0000477!8.97e-08!286;UBERON:0003929!1.66e-07!54;UBERON:0004921!2.50e-07!129;UBERON:0004185!2.50e-07!129;UBERON:0009497!6.17e-07!25;UBERON:0000015!6.17e-07!25;UBERON:0002423!6.17e-07!25;UBERON:0006235!6.17e-07!25;UBERON:0004161!6.17e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.93e-15;2!UBERON:0003497;1.93e-15;2!UBERON:0003909;1.93e-15;2!UBERON:0003835;1.93e-15;2!UBERON:0004638;8.91e-14;18!UBERON:0001986;8.91e-14;18!UBERON:0004852;8.91e-14;18!UBERON:0003915;5.83e-13;9!UBERON:0004700;5.83e-13;9!UBERON:0001917;5.83e-13;9!UBERON:0000487;3.50e-11;22!UBERON:0001280;1.34e-10;3!UBERON:0004647;1.34e-10;3!UBERON:0006914;8.83e-10;25!UBERON:0000941;2.12e-08;1!UBERON:0001785;2.12e-08;1!UBERON:0002464;2.12e-08;1!UBERON:0004904;2.12e-08;1!UBERON:0001021;2.12e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.45e-15,2;UBERON:0003497,1.45e-15,2;UBERON:0003909,1.45e-15,2;UBERON:0003835,1.45e-15,2;UBERON:0004638,6.78e-14,18;UBERON:0001986,6.78e-14,18;UBERON:0004852,6.78e-14,18;UBERON:0003915,5.32e-13,9;UBERON:0004700,5.32e-13,9;UBERON:0001917,5.32e-13,9;UBERON:0000487,2.80e-11,22;UBERON:0001280,1.11e-10,3;UBERON:0004647,1.11e-10,3;UBERON:0005171,1.11e-10,3;UBERON:0006914,7.29e-10,25;UBERON:0000941,1.98e-08,1;UBERON:0001785,1.98e-08,1;UBERON:0002464,1.98e-08,1;UBERON:0004904,1.98e-08,1;UBERON:0001021,1.98e-08,1;UBERON:0003902,1.98e-08,1;UBERON:0005425,1.98e-08,1;UBERON:0002294,1.13e-07,9;UBERON:0001173,1.13e-07,9;UBERON:0004912,1.13e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.69592382577203,3.77549492588915,1.6507082516404,1.04497483268405,0.516833518338658,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,1.96459402224975,0.673588117878509,1.46394924628319,0,0.949265659568129,0.366403487860815,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,1.4763109092493,2.80483547606892,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,4.0502279646084,3.93923419527467,3.60299883542404,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.432807638929335,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,2.50634477090067,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,1.99052386215701,0.442287822516696,0,0.296521128680622,1.23563938946503,1.14864144456001,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.438535902517113,0.246346371159628,0,0,0,0,0,0.316553979779393,0.391102765469606,0,1.06726497369676,0,0.288180834308212,0,1.37275998289572,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,1.40963004463334,1.49502377594773,0.157204305099666,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0.354809480650555,0,0,0.203909198930495,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.476128862927481,0.452122368852043,0.31037357147929,0,0.12729431655633,0.606351566874658,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.69592382577203,3.77549492588915,1.6507082516404,1.04497483268405,0.516833518338658,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,1.96459402224975,0.673588117878509,1.46394924628319,0,0.949265659568129,0.366403487860815,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,1.4763109092493,2.80483547606892,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,4.0502279646084,3.93923419527467,3.60299883542404,3.53478813593864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0.432807638929335,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,2.50634477090067,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,1.99052386215701,0.442287822516696,0,0.296521128680622,1.23563938946503,1.14864144456001,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.438535902517113,0.246346371159628,0,0,0,0,0,0.316553979779393,0.391102765469606,0,1.06726497369676,0,0.288180834308212,0,1.37275998289572,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,1.40963004463334,1.49502377594773,0.157204305099666,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0.354809480650555,0,0,0.203909198930495,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.476128862927481,0.452122368852043,0.31037357147929,0,0.12729431655633,0.606351566874658,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr1:204463061..204463102,- | |||
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Latest revision as of 02:39, 28 July 2015
Short description: | p@chr1:204463061..204463102, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204463061..204463102, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.66e-37 | 5 |
basophil mast progenitor cell | 2.66e-37 | 5 |
endocrine cell | 1.10e-20 | 9 |
endothelial cell of sinusoid | 1.45e-15 | 2 |
endothelial cell of hepatic sinusoid | 1.45e-15 | 2 |
blood vessel endothelial cell | 6.78e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.78e-14 | 18 |
endothelial cell of artery | 5.32e-13 | 9 |
endothelial cell | 1.07e-11 | 36 |
endothelial cell of umbilical vein | 1.48e-10 | 3 |
endothelial cell of vascular tree | 2.69e-10 | 24 |
meso-epithelial cell | 3.90e-09 | 45 |
lining cell | 7.68e-07 | 58 |
barrier cell | 7.68e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.45e-15 | 2 |
abdomen blood vessel | 1.45e-15 | 2 |
sinusoid | 1.45e-15 | 2 |
abdominal segment blood vessel | 1.45e-15 | 2 |
blood vessel endothelium | 6.78e-14 | 18 |
endothelium | 6.78e-14 | 18 |
cardiovascular system endothelium | 6.78e-14 | 18 |
endothelial tube | 5.32e-13 | 9 |
arterial system endothelium | 5.32e-13 | 9 |
endothelium of artery | 5.32e-13 | 9 |
simple squamous epithelium | 2.80e-11 | 22 |
liver parenchyma | 1.11e-10 | 3 |
liver lobule | 1.11e-10 | 3 |
hepatic duct | 1.11e-10 | 3 |
squamous epithelium | 7.29e-10 | 25 |
cranial nerve II | 1.98e-08 | 1 |
cranial nerve | 1.98e-08 | 1 |
nerve trunk | 1.98e-08 | 1 |
nerve connecting eye with brain | 1.98e-08 | 1 |
nerve | 1.98e-08 | 1 |
retinal neural layer | 1.98e-08 | 1 |
presumptive neural retina | 1.98e-08 | 1 |
biliary system | 1.13e-07 | 9 |
biliary tree | 1.13e-07 | 9 |
biliary bud | 1.13e-07 | 9 |