FFCP PHASE1:Hg19::chr7:149535455..149535555,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:149535455..149535555,+ to FFCP PHASE1:Hg19::chr7:149535455..149535555,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643641 | |EntrezGene=643641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34519 | |HGNC=34519 | ||
|TSSclassifier=strong | |||
|UniProt=O60290,C9JB70 | |UniProt=O60290,C9JB70 | ||
|association_with_transcript=0bp_to_ENST00000223210,ENST00000460379,ENST00000489820,NM_001099220,uc003wgl.1,uc010lpn.2_5end | |||
|cluster_id=chr7:149535455..149535555,+ | |||
|coexpression_cluster_id=C3484 | |||
|description=CAGE_peak_1_at_ZNF862_5end | |||
|id=chr7:149535455..149535555,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0000084!1.08e-09!25;CL:0000827!1.08e-09!25;CL:0000625!1.60e-07!11;CL:0000542!2.00e-07!53;CL:0000051!2.00e-07!53;CL:0000838!2.34e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.24e-11;18!CL:0000789;4.24e-11;18!CL:0002419;4.24e-11;18!CL:0000084;1.01e-09;25!CL:0000625;1.50e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.76e-11,18;CL:0000789,4.76e-11,18;CL:0002420,4.76e-11,18;CL:0002419,4.76e-11,18;CL:0000790,4.76e-11,18;CL:0000084,1.08e-09,25;CL:0000827,1.08e-09,25;CL:0000625,1.60e-07,11;CL:0000542,1.98e-07,53;CL:0000051,1.98e-07,53;CL:0000838,2.33e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;4.24e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.38e-23!115;UBERON:0001049!4.22e-18!57;UBERON:0005068!4.22e-18!57;UBERON:0006241!4.22e-18!57;UBERON:0007135!4.22e-18!57;UBERON:0002616!1.44e-16!59;UBERON:0000955!4.94e-15!69;UBERON:0006238!4.94e-15!69;UBERON:0001017!7.35e-15!82;UBERON:0000073!8.10e-15!94;UBERON:0001016!8.10e-15!94;UBERON:0005743!4.71e-14!86;UBERON:0002346!7.31e-14!90;UBERON:0002780!7.35e-14!41;UBERON:0001890!7.35e-14!41;UBERON:0006240!7.35e-14!41;UBERON:0003080!5.46e-13!42;UBERON:0003075!5.78e-13!86;UBERON:0007284!5.78e-13!86;UBERON:0000153!5.68e-12!129;UBERON:0007811!5.68e-12!129;UBERON:0001893!1.34e-11!34;UBERON:0002020!1.94e-11!34;UBERON:0003528!1.94e-11!34;UBERON:0002791!3.07e-11!33;UBERON:0001869!1.63e-10!32;UBERON:0000033!4.45e-10!123;UBERON:0000924!6.66e-10!173;UBERON:0006601!6.66e-10!173;UBERON:0003056!9.41e-10!61;UBERON:0004121!3.44e-09!169;UBERON:0001950!6.08e-09!20;UBERON:0002619!1.16e-08!22;UBERON:0000956!3.74e-08!25;UBERON:0000203!3.74e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.86e-11;53!UBERON:0002616;2.86e-11;53!UBERON:0002780;3.30e-10;41!UBERON:0001890;3.30e-10;41!UBERON:0001893;5.13e-10;34!UBERON:0003528;8.49e-10;34!UBERON:0002020;8.49e-10;34!UBERON:0002791;1.23e-09;32!UBERON:0001869;1.71e-09;32!UBERON:0001950;5.22e-09;20!UBERON:0002619;1.08e-08;22!UBERON:0000956;3.50e-08;25!UBERON:0000203;3.50e-08;25!UBERON:0001017;6.56e-08;75!UBERON:0000955;1.87e-07;68!UBERON:0001016;2.82e-07;83!UBERON:0007023;5.83e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.66e-22,114;UBERON:0001049,5.27e-19,56;UBERON:0005068,5.27e-19,56;UBERON:0006241,5.27e-19,56;UBERON:0007135,5.27e-19,56;UBERON:0000073,7.36e-18,53;UBERON:0002616,7.36e-18,53;UBERON:0001016,3.41e-16,89;UBERON:0000955,9.95e-16,68;UBERON:0006238,9.95e-16,68;UBERON:0002346,1.03e-15,86;UBERON:0001017,1.76e-15,81;UBERON:0003075,8.69e-15,82;UBERON:0007284,8.69e-15,82;UBERON:0002780,7.35e-14,41;UBERON:0001890,7.35e-14,41;UBERON:0003080,7.35e-14,41;UBERON:0006240,7.35e-14,41;UBERON:0001893,1.34e-11,34;UBERON:0003528,1.94e-11,34;UBERON:0002020,1.94e-11,34;UBERON:0003056,8.17e-11,61;UBERON:0004121,8.49e-11,171;UBERON:0000924,8.49e-11,171;UBERON:0006601,8.49e-11,171;UBERON:0002791,1.07e-10,32;UBERON:0001869,1.63e-10,32;UBERON:0010371,4.55e-10,104;UBERON:0001950,6.08e-09,20;UBERON:0002619,1.16e-08,22;UBERON:0000956,3.74e-08,25;UBERON:0000203,3.74e-08,25 | |||
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| ||
|short_description=p1@ZNF862 | |||
}} | }} |
Latest revision as of 02:13, 17 September 2015
Short description: | p1@ZNF862 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF862_5end |
Coexpression cluster: | C3484_CD4_cerebellum_CD8_pineal_thalamus_substantia_optic |
Association with transcript: | 0bp_to_ENST00000223210, ENST00000460379, ENST00000489820, NM_001099220, uc003wgl.1, uc010lpn.2_5end |
EntrezGene: | ZNF862 |
HGNC: | 34519 |
UniProt: | O60290C9JB70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.76e-11 | 18 |
alpha-beta T cell | 4.76e-11 | 18 |
immature T cell | 4.76e-11 | 18 |
mature T cell | 4.76e-11 | 18 |
immature alpha-beta T cell | 4.76e-11 | 18 |
T cell | 1.08e-09 | 25 |
pro-T cell | 1.08e-09 | 25 |
CD8-positive, alpha-beta T cell | 1.60e-07 | 11 |
lymphocyte | 1.98e-07 | 53 |
common lymphoid progenitor | 1.98e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.33e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.66e-22 | 114 |
neural tube | 5.27e-19 | 56 |
neural rod | 5.27e-19 | 56 |
future spinal cord | 5.27e-19 | 56 |
neural keel | 5.27e-19 | 56 |
regional part of nervous system | 7.36e-18 | 53 |
regional part of brain | 7.36e-18 | 53 |
nervous system | 3.41e-16 | 89 |
brain | 9.95e-16 | 68 |
future brain | 9.95e-16 | 68 |
neurectoderm | 1.03e-15 | 86 |
central nervous system | 1.76e-15 | 81 |
neural plate | 8.69e-15 | 82 |
presumptive neural plate | 8.69e-15 | 82 |
regional part of forebrain | 7.35e-14 | 41 |
forebrain | 7.35e-14 | 41 |
anterior neural tube | 7.35e-14 | 41 |
future forebrain | 7.35e-14 | 41 |
telencephalon | 1.34e-11 | 34 |
brain grey matter | 1.94e-11 | 34 |
gray matter | 1.94e-11 | 34 |
pre-chordal neural plate | 8.17e-11 | 61 |
ectoderm-derived structure | 8.49e-11 | 171 |
ectoderm | 8.49e-11 | 171 |
presumptive ectoderm | 8.49e-11 | 171 |
regional part of telencephalon | 1.07e-10 | 32 |
cerebral hemisphere | 1.63e-10 | 32 |
ecto-epithelium | 4.55e-10 | 104 |
neocortex | 6.08e-09 | 20 |
regional part of cerebral cortex | 1.16e-08 | 22 |
cerebral cortex | 3.74e-08 | 25 |
pallium | 3.74e-08 | 25 |