FFCP PHASE1:Mm9::chr6:42643070..42643081,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:42643070..42643081,- to FFCP PHASE1:Mm9::chr6:42643070..42643081,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77574 | |EntrezGene=77574 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3563 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BNE1 | |UniProt=Q8BNE1 | ||
|association_with_transcript=4bp_to_ENSMUST00000121083_5end | |||
|cluster_id=chr6:42643070..42643081,- | |||
|description=CAGE_peak_4_at_Fam115a_5end | |||
|id=chr6:42643070..42643081,- | |||
|ontology_enrichment_celltype=CL:0000540!5.97e-12!33;CL:0000047!5.97e-12!33;CL:0000031!5.97e-12!33;CL:0000404!5.97e-12!33;CL:0000393!3.04e-09!39;CL:0000211!3.04e-09!39;CL:0000117!3.71e-09!23;CL:0000337!3.71e-09!23;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!1.53e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.36e-12,33;CL:0000047,1.36e-12,33;CL:0000031,1.36e-12,33;CL:0000404,1.36e-12,33;CL:0000393,6.60e-10,39;CL:0000211,6.60e-10,39;CL:0000117,1.26e-09,23;CL:0000337,1.26e-09,23;CL:0000221,1.24e-07,44;CL:0000133,1.24e-07,44;CL:0002319,1.48e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.60e-20!71;UBERON:0003075!2.60e-20!71;UBERON:0007284!2.60e-20!71;UBERON:0004121!3.48e-19!102;UBERON:0000924!3.48e-19!102;UBERON:0006601!3.48e-19!102;UBERON:0001017!7.34e-17!73;UBERON:0005743!7.34e-17!73;UBERON:0000073!1.46e-16!75;UBERON:0001016!1.46e-16!75;UBERON:0000033!6.40e-15!63;UBERON:0003056!9.97e-15!49;UBERON:0001049!3.64e-14!52;UBERON:0005068!3.64e-14!52;UBERON:0006241!3.64e-14!52;UBERON:0007135!3.64e-14!52;UBERON:0002780!4.30e-11!39;UBERON:0001890!4.30e-11!39;UBERON:0006240!4.30e-11!39;UBERON:0003080!6.23e-11!40;UBERON:0000955!6.88e-11!50;UBERON:0006238!6.88e-11!50;UBERON:0002616!1.00e-10!49;UBERON:0002020!7.51e-10!34;UBERON:0000468!1.07e-09!333;UBERON:0004111!9.80e-09!122;UBERON:0000922!1.75e-08!328;UBERON:0000025!4.18e-08!114;UBERON:0002791!1.12e-07!29;UBERON:0003528!1.12e-07!29;UBERON:0001893!1.12e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.02e-19,64;UBERON:0003075,2.02e-19,64;UBERON:0007284,2.02e-19,64;UBERON:0010314,2.84e-18,92;UBERON:0010371,5.04e-17,73;UBERON:0004121,2.42e-16,95;UBERON:0000924,2.42e-16,95;UBERON:0006601,2.42e-16,95;UBERON:0001017,3.46e-16,73;UBERON:0001016,1.39e-15,75;UBERON:0003056,8.02e-15,49;UBERON:0001049,6.98e-14,52;UBERON:0005068,6.98e-14,52;UBERON:0006241,6.98e-14,52;UBERON:0007135,6.98e-14,52;UBERON:0000073,1.14e-12,54;UBERON:0000955,3.27e-11,47;UBERON:0006238,3.27e-11,47;UBERON:0002780,4.19e-11,39;UBERON:0001890,4.19e-11,39;UBERON:0006240,4.19e-11,39;UBERON:0002616,4.84e-11,46;UBERON:0003080,6.05e-11,40;UBERON:0002020,8.62e-10,34;UBERON:0004111,3.54e-08,122;UBERON:0000025,1.03e-07,114;UBERON:0003528,1.59e-07,29;UBERON:0002791,1.59e-07,29;UBERON:0001893,1.59e-07,29;UBERON:0000922,3.66e-07,320 | |||
|phase1_expression=3.36312578920067,0,0,0.30246421130683,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0.22940928106717,0,0,0.430942465371778,0,0.504060259519861,0.665191531965914,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,1.25896817975577,1.62203089951223,1.46837401729345,0.782391344348039,0.65407546914134,0.878744730937887,1.36100929351998,0.839918529752175,1.43752564364972,0,0,0,0.514518872071894,0,0,4.65327859977075,3.1739458756322,2.53532561402472,1.35537812827653,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,3.11068836925433,2.70011876663381,3.99617426567626,2.28520787523043,2.42955395046775,4.77714116938321,4.12135525378416,3.67687514644008,1.10115880999389,1.14918604276669,1.22885226604995,5.67111037239834,4.39140689291566,5.73004707612436,1.11673199600552,2.8138130501584,1.98637722109853,4.41942878210502,3.70166370077668,3.54158947068071,0.984440513331393,1.51143120213571,1.44932244350839,0,0.679971333707751,0,0,0,0.421333260395256,3.2381761289831,0.259786004602869,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.29894624606728,0.506719730950197,1.01104889002957,0.45673551887624,0.258937883647172,2.07818994690755,0.867426633830679,3.04465478312141,2.07553947530453,1.3565037649736,3.05730638552832,1.13099932196708,0.247194967734374,0.722996784599558,0.884610551949874,1.94120219936891,1.32504911076236,0.484875253135222,5.59175283654366,2.63502717310392,2.51336048176146,0.766371165625774,0,0,0,1.3481157546434,1.37250180845588,3.8952849154988,2.78118912307642,2.04572365864264,2.0778804455956,2.43361894601636,1.42575109390443,1.11966273549084,0.505445516867349,0.420883711772948,5.07469727554544,4.82794419310293,3.24111833649629,4.37043971723574,3.87808045162569,5.25266253167884,3.65436725782942,2.32833033665114,2.58681591519411,1.70195472151037,2.46331573829528,1.09597866213787,1.39023624612799,0.348252166522167,1.23469281844766,1.99034266818493,0,0,0,1.44988040774851,3.04883877975425,2.34080679899319,1.89395788468168,2.95146347621106,2.46827380619805,1.16266972375204,1.87791380979733,1.28441876603886,1.97471819896177,1.97000956894914,0.729619285912702,0.584799949701329,1.53685080703735,0.671032093801859,2.94405927989778,2.98423375899925,0,0.528901133327089,4.26576501070468,2.09013004674395,2.31961430379768,0.605050573870028,1.11189021922435,1.14135375667535,0,2.30578536613615,1.00534083520108,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,0.199141273254367,1.51734320762465,1.48523066392647,4.50830942692322,2.24016460629846,0.775809948670503,2.10407459670956,1.58091342810643,1.32849133181642,1.09899109488962,0.740382983530803,0,0.500535317148282,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,1.43848068725405,1.78348749452539,0.549122826376163,0,1.48856379067401,0.312037673114561,0,0,0.964887042726734,1.29327233116623,2.27389694124582,2.11854469374634,2.37643120085263,1.87752198630802,1.67506257441816,2.38043640886014,2.92700471786698,2.52216230569906,2.6575762757853,2.71073106717728,2.45794972073607,2.76295970985433,1.44649058581512,1.50791283939272,1.08781136763742,1.47529281905711,1.65562047782839,2.40825884981688,2.46144541843627,1.14754461763673,1.00988370881749,3.15508219416257,1.95219372148319,4.73931475012158,1.91175038362042,1.33679204449436,1.13230612315533,3.64329631507405,3.21481443702443,2.76701444562566,1.92792789853084,1.41940085208269,1.95872164033981,2.11753047159649,1.48473110675282,0,1.69946445308487,1.209294227859,1.32023555829129,1.47650946440386,1.22974059177571,2.58428293168221,1.45413491791002,1.42598951353889,1.26414703174326,0,0,2.38307724027652,2.70091641046965,1.81102157295856,2.14337035031592,3.72414490648775,2.49716344642899,4.11372551505302,3.04464949114599,1.17335854031855,0.21183207086382,2.20528398054962,0.16488625294148,1.29171541356724,0.844380948994182,0.835606408021955,0.492422699235184,1.7488850197791,2.78137953015765,0,2.27025554759545,0.925972636848558,0,0.410082683163076,0.228778173206523,0.849892149969277,0,0.276399947608848,0,1.73984796469624,2.23651413839534,2.26811215725783,2.92723614420256,1.74690050996942,1.07891477107857,1.48776220305605,1.30877970992015,1.29614973291793,1.86401793926078,0,1.64468200648377,2.15096037594227,2.72231663681667,1.42075805825504,0.844780627453891,1.5256441023948,1.5624526181274,1.15345278868282,0,0,0,1.01362607645082,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.665957860122194,0,0.503653849092235,1.15913756419314,1.31377732815827,1.09890974560359,0.428736758158132,2.50786052017682,1.12950368523413,2.76195141904306,1.71868654031819,1.71853182343688,2.05524755931193,0.755393897389701,1.35004500046361,2.2516060161211,1.81256963593682,2.07104124700728,3.00983307994112,1.99512436700516,2.73173769206615,1.70174701947806,1.25767897576789,1.65459157605013,1.77797382241292,1.85431551515005,2.24643446714271,1.01078884705519,2.28131369901216,0.754505365544305,1.03005658216871,1.79270426733634,1.49332219284595,0.476293691283074,1.27472758539341,1.35036454324594,0.412085900803307,1.76638704161277,1.37147700954166,1.77475806159337,2.86123427936785,1.16277133305863,1.88218760830661,1.52306294205018,2.92684756596436,0.789209134313529,1.49384525230448,1.68342681497322,1.89816028998679,2.1670986122624,1.63692417267876,1.54936841185966,1.54325288784913,2.24829520144151,0.467863216890817,1.71896843238639,1.3390183244819,0.882365676478062,0.463735671240843 | |phase1_expression=3.36312578920067,0,0,0.30246421130683,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0.22940928106717,0,0,0.430942465371778,0,0.504060259519861,0.665191531965914,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,1.25896817975577,1.62203089951223,1.46837401729345,0.782391344348039,0.65407546914134,0.878744730937887,1.36100929351998,0.839918529752175,1.43752564364972,0,0,0,0.514518872071894,0,0,4.65327859977075,3.1739458756322,2.53532561402472,1.35537812827653,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,3.11068836925433,2.70011876663381,3.99617426567626,2.28520787523043,2.42955395046775,4.77714116938321,4.12135525378416,3.67687514644008,1.10115880999389,1.14918604276669,1.22885226604995,5.67111037239834,4.39140689291566,5.73004707612436,1.11673199600552,2.8138130501584,1.98637722109853,4.41942878210502,3.70166370077668,3.54158947068071,0.984440513331393,1.51143120213571,1.44932244350839,0,0.679971333707751,0,0,0,0.421333260395256,3.2381761289831,0.259786004602869,0.35333957451034,1.69012103732017,2.56652954828636,0,0,1.29894624606728,0.506719730950197,1.01104889002957,0.45673551887624,0.258937883647172,2.07818994690755,0.867426633830679,3.04465478312141,2.07553947530453,1.3565037649736,3.05730638552832,1.13099932196708,0.247194967734374,0.722996784599558,0.884610551949874,1.94120219936891,1.32504911076236,0.484875253135222,5.59175283654366,2.63502717310392,2.51336048176146,0.766371165625774,0,0,0,1.3481157546434,1.37250180845588,3.8952849154988,2.78118912307642,2.04572365864264,2.0778804455956,2.43361894601636,1.42575109390443,1.11966273549084,0.505445516867349,0.420883711772948,5.07469727554544,4.82794419310293,3.24111833649629,4.37043971723574,3.87808045162569,5.25266253167884,3.65436725782942,2.32833033665114,2.58681591519411,1.70195472151037,2.46331573829528,1.09597866213787,1.39023624612799,0.348252166522167,1.23469281844766,1.99034266818493,0,0,0,1.44988040774851,3.04883877975425,2.34080679899319,1.89395788468168,2.95146347621106,2.46827380619805,1.16266972375204,1.87791380979733,1.28441876603886,1.97471819896177,1.97000956894914,0.729619285912702,0.584799949701329,1.53685080703735,0.671032093801859,2.94405927989778,2.98423375899925,0,0.528901133327089,4.26576501070468,2.09013004674395,2.31961430379768,0.605050573870028,1.11189021922435,1.14135375667535,0,2.30578536613615,1.00534083520108,0.994782360205754,0.779856348476481,1.79763881730844,1.08069024937347,0.199141273254367,1.51734320762465,1.48523066392647,4.50830942692322,2.24016460629846,0.775809948670503,2.10407459670956,1.58091342810643,1.32849133181642,1.09899109488962,0.740382983530803,0,0.500535317148282,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,1.43848068725405,1.78348749452539,0.549122826376163,0,1.48856379067401,0.312037673114561,0,0,0.964887042726734,1.29327233116623,2.27389694124582,2.11854469374634,2.37643120085263,1.87752198630802,1.67506257441816,2.38043640886014,2.92700471786698,2.52216230569906,2.6575762757853,2.71073106717728,2.45794972073607,2.76295970985433,1.44649058581512,1.50791283939272,1.08781136763742,1.47529281905711,1.65562047782839,2.40825884981688,2.46144541843627,1.14754461763673,1.00988370881749,3.15508219416257,1.95219372148319,4.73931475012158,1.91175038362042,1.33679204449436,1.13230612315533,3.64329631507405,3.21481443702443,2.76701444562566,1.92792789853084,1.41940085208269,1.95872164033981,2.11753047159649,1.48473110675282,0,1.69946445308487,1.209294227859,1.32023555829129,1.47650946440386,1.22974059177571,2.58428293168221,1.45413491791002,1.42598951353889,1.26414703174326,0,0,2.38307724027652,2.70091641046965,1.81102157295856,2.14337035031592,3.72414490648775,2.49716344642899,4.11372551505302,3.04464949114599,1.17335854031855,0.21183207086382,2.20528398054962,0.16488625294148,1.29171541356724,0.844380948994182,0.835606408021955,0.492422699235184,1.7488850197791,2.78137953015765,0,2.27025554759545,0.925972636848558,0,0.410082683163076,0.228778173206523,0.849892149969277,0,0.276399947608848,0,1.73984796469624,2.23651413839534,2.26811215725783,2.92723614420256,1.74690050996942,1.07891477107857,1.48776220305605,1.30877970992015,1.29614973291793,1.86401793926078,0,1.64468200648377,2.15096037594227,2.72231663681667,1.42075805825504,0.844780627453891,1.5256441023948,1.5624526181274,1.15345278868282,0,0,0,1.01362607645082,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.680191150845634,0.665957860122194,0,0.503653849092235,1.15913756419314,1.31377732815827,1.09890974560359,0.428736758158132,2.50786052017682,1.12950368523413,2.76195141904306,1.71868654031819,1.71853182343688,2.05524755931193,0.755393897389701,1.35004500046361,2.2516060161211,1.81256963593682,2.07104124700728,3.00983307994112,1.99512436700516,2.73173769206615,1.70174701947806,1.25767897576789,1.65459157605013,1.77797382241292,1.85431551515005,2.24643446714271,1.01078884705519,2.28131369901216,0.754505365544305,1.03005658216871,1.79270426733634,1.49332219284595,0.476293691283074,1.27472758539341,1.35036454324594,0.412085900803307,1.76638704161277,1.37147700954166,1.77475806159337,2.86123427936785,1.16277133305863,1.88218760830661,1.52306294205018,2.92684756596436,0.789209134313529,1.49384525230448,1.68342681497322,1.89816028998679,2.1670986122624,1.63692417267876,1.54936841185966,1.54325288784913,2.24829520144151,0.467863216890817,1.71896843238639,1.3390183244819,0.882365676478062,0.463735671240843 | ||
|short_description=p4@Fam115a | |||
}} | }} |
Latest revision as of 06:09, 27 September 2015
Short description: | p4@Fam115a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam115a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3563 |
Association with transcript: | 4bp_to_ENSMUST00000121083_5end |
EntrezGene: | Fam115a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.36e-12 | 33 |
neuronal stem cell | 1.36e-12 | 33 |
neuroblast | 1.36e-12 | 33 |
electrically signaling cell | 1.36e-12 | 33 |
electrically responsive cell | 6.60e-10 | 39 |
electrically active cell | 6.60e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.26e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-09 | 23 |
ectodermal cell | 1.24e-07 | 44 |
neurectodermal cell | 1.24e-07 | 44 |
neural cell | 1.48e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.02e-19 | 64 |
neural plate | 2.02e-19 | 64 |
presumptive neural plate | 2.02e-19 | 64 |
structure with developmental contribution from neural crest | 2.84e-18 | 92 |
ecto-epithelium | 5.04e-17 | 73 |
ectoderm-derived structure | 2.42e-16 | 95 |
ectoderm | 2.42e-16 | 95 |
presumptive ectoderm | 2.42e-16 | 95 |
central nervous system | 3.46e-16 | 73 |
nervous system | 1.39e-15 | 75 |
pre-chordal neural plate | 8.02e-15 | 49 |
neural tube | 6.98e-14 | 52 |
neural rod | 6.98e-14 | 52 |
future spinal cord | 6.98e-14 | 52 |
neural keel | 6.98e-14 | 52 |
regional part of nervous system | 1.14e-12 | 54 |
brain | 3.27e-11 | 47 |
future brain | 3.27e-11 | 47 |
regional part of forebrain | 4.19e-11 | 39 |
forebrain | 4.19e-11 | 39 |
future forebrain | 4.19e-11 | 39 |
regional part of brain | 4.84e-11 | 46 |
anterior neural tube | 6.05e-11 | 40 |
gray matter | 8.62e-10 | 34 |
anatomical conduit | 3.54e-08 | 122 |
tube | 1.03e-07 | 114 |
brain grey matter | 1.59e-07 | 29 |
regional part of telencephalon | 1.59e-07 | 29 |
telencephalon | 1.59e-07 | 29 |
embryo | 3.66e-07 | 320 |