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{{f5samples
{{f5samples
|id=FF:11752-123G6
|DRA_sample_Accession=CAGE@SAMD00005347
|name=mesenchymal precursor cell - cardiac, donor1
|accession_numbers=CAGE;DRX008551;DRR009423;DRZ000848;DRZ002233;DRZ012198;DRZ013583
|sample_id=11752
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=123G6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569
|rna_box=123
|rna_position=G6
|sample_cell_lot=HH-337-AD
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.05
|rna_od260/280=2.02
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=34.92525
|rna_concentration=0.46567
|sample_note=
|profile_hcage=CNhs12368,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000011,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000133,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0000569,CL:0000723,CL:0002320,CL:0002321,CL:0002371,CL:0002494
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.97!92.91!TCF21;;chr8:72756637..72756664,-!p3@MSC!1.38!26.09!MSC;;chr8:25902876..25902936,-!p1@EBF2!1.35!21.28!EBF2;;chr19:45971246..45971265,+!p1@FOSB!1.31!349.44!FOSB;;chr8:72756063..72756125,-!p1@MSC!1.28!36.39!MSC;;chr1:170632285..170632309,+!p1@PRRX1!1.28!20.37!PRRX1;;chr8:11561684..11561751,+!p1@GATA4!1.25!16.71!GATA4;;chr17:46132044..46132080,+!p4@NFE2L1!1.22!15.56!NFE2L1;;chr3:141105705..141105770,+!p4@ZBTB38!1.20!17.85!ZBTB38;;chr8:72756267..72756296,-!p4@MSC!1.19!21.28!MSC;;chr8:72756667..72756736,-!p2@MSC!1.18!22.20!MSC;;chr8:72755987..72756002,-!p7@MSC!1.13!12.36!MSC;;chr17:38256799..38256815,-!p3@NR1D1!1.12!22.20!NR1D1;;chr21:36260773..36260804,-!p7@RUNX1!1.08!14.87!RUNX1;;chr8:72756213..72756243,-!p5@MSC!1.08!14.19!MSC;;chr19:50432453..50432468,+!p1@ATF5!1.05!580.34!ATF5;;chr19:50435736..50435781,+!p3@ATF5!1.05!14.19!ATF5;;chr11:46299199..46299233,+!p1@CREB3L1!1.03!51.49!CREB3L1;;chr8:55370487..55370503,+!p1@SOX17!1.00!8.92!SOX17;;chr1:212782094..212782109,+!p1@ATF3!0.98!238.45!ATF3;;chr1:158979872..158979898,+!p3@IFI16!0.98!27.00!IFI16;;chr22:38598086..38598105,+!p1@MAFF!0.97!91.54!MAFF;;chr2:19558373..19558392,-!p1@OSR1!0.97!23.11!OSR1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.94!412.60!NFKBIZ;;chr7:35293685..35293718,-!p1@TBX20!0.94!7.78!TBX20;;chr17:46126136..46126152,+!p1@NFE2L1!0.93!397.95!NFE2L1;;chr1:59249688..59249703,-!p3@JUN!0.93!47.37!JUN;;chr1:170633262..170633285,+!p3@PRRX1!0.93!8.70!PRRX1;;chr12:52445218..52445237,+!p1@NR4A1!0.92!95.43!NR4A1;;chr1:221052994..221053008,+!p6@HLX!0.91!8.47!HLX;;chr3:157823517..157823562,-!p1@SHOX2!0.90!7.55!SHOX2;;chr9:110252035..110252057,-!p1@KLF4!0.89!113.28!KLF4;;chr20:50179368..50179392,-!p2@NFATC2!0.88!8.70!NFATC2;;chr15:83953397..83953425,-!p1@BNC1!0.88!7.55!BNC1;;chr6:126102292..126102329,+!p3@NCOA7!0.87!22.43!NCOA7;;chr8:49833948..49833973,-!p2@SNAI2!0.86!41.65!SNAI2;;chr1:221053049..221053075,+!p3@HLX!0.86!11.21!HLX;;chr1:170632137..170632172,+!p10@PRRX1!0.86!6.18!PRRX1;;chr12:10870927..10870966,-!p5@CSDA!0.86!6.18!CSDA;;chr8:72756380..72756427,-!p8@MSC!0.86!6.18!MSC;;chr17:38256822..38256851,-!p1@NR1D1!0.85!51.03!NR1D1;;chr15:42749722..42749739,-!p2@ZFP106!0.85!11.21!ZFP106;;chr1:170633348..170633399,+!p2@PRRX1!0.85!8.47!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!0.84!19.91!TWIST2;;chr19:33865009..33865090,+!p3@CEBPG!0.84!8.01!CEBPG;;chr2:113994491..113994515,-!p7@PAX8!0.84!5.95!PAX8;;chr12:77459306..77459365,-!p1@E2F7!0.83!76.89!E2F7;;chr7:19157043..19157088,-!p2@TWIST1!0.83!15.10!TWIST1;;chr14:29235961..29236008,+!p1@FOXG1!0.83!5.72!FOXG1;;chr14:75745523..75745537,+!p1@FOS!0.80!684.92!FOS;;chr14:29234581..29234601,+!p2@FOXG1!0.80!5.26!FOXG1;;chr5:137804484..137804498,+!p2@EGR1!0.79!22.20!EGR1;;chr3:12329397..12329433,+!p2@PPARG!0.79!12.59!PPARG;;chr1:221052776..221052799,+!p1@HLX!0.79!9.84!HLX;;chr12:72056800..72056834,+!p1@THAP2!0.79!7.09!THAP2;;chr17:46128217..46128243,+!p11@NFE2L1!0.78!5.03!NFE2L1;;chrY:21906594..21906622,-!p1@KDM5D!0.78!5.03!KDM5D;;chr2:185463247..185463263,+!p1@ZNF804A!0.77!9.15!ZNF804A;;chr18:19749541..19749557,+!p1@GATA6!0.76!16.02!GATA6;;chr11:46299539..46299620,+!p2@CREB3L1!0.76!8.47!CREB3L1;;chr8:72756194..72756208,-!p9@MSC!0.76!4.81!MSC;;chr11:65687362..65687436,+!p3@DRAP1!0.75!22.88!DRAP1;;chr19:42636586..42636607,-!p1@POU2F2!0.75!13.73!POU2F2;;chr14:75746722..75746777,+!p2@FOS!0.75!6.18!FOS;;chrY:2803415..2803468,+!p1@ZFY!0.75!4.58!ZFY;;chr2:145275162..145275202,-!p2@ZEB2!0.74!29.29!ZEB2;;chr11:65686732..65686756,+!p2@DRAP1!0.74!21.05!DRAP1;;chr19:53360870..53360873,-!p1@ZNF468!0.74!18.08!ZNF468;;chr1:170632250..170632277,+!p7@PRRX1!0.73!4.35!PRRX1;;chr18:3450293..3450304,+!p4@TGIF1!0.72!11.44!TGIF1;;chr3:5021268..5021282,+!p4@BHLHE40!0.72!9.38!BHLHE40;;chr1:158979851..158979865,+!p5@IFI16!0.71!9.84!IFI16;;chr1:170632115..170632136,+!p9@PRRX1!0.71!4.12!PRRX1;;chr14:29236269..29236285,+!p3@FOXG1!0.71!4.12!FOXG1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.70!7.09!MEIS3P1;;chr8:49833978..49833996,-!p1@SNAI2!0.69!92.22!SNAI2;;chr8:72756023..72756055,-!p6@MSC!0.69!5.03!MSC;;chr8:72756251..72756262,-!p12@MSC!0.69!3.89!MSC;;chr3:141087454..141087465,+!p19@ZBTB38!0.69!3.89!ZBTB38;;chr4:174450089..174450153,-!p2@HAND2!0.69!3.89!HAND2;;chr2:70142232..70142251,+!p1@MXD1!0.68!24.26!MXD1;;chr3:114343768..114343822,-!p1@ZBTB20!0.68!18.54!ZBTB20;;chr2:239756739..239756755,+!p2@TWIST2!0.68!6.87!TWIST2;;chr20:6748325..6748352,+!p1@BMP2!0.68!5.72!BMP2;;chr9:110250697..110250738,-!p2@KLF4!0.68!4.58!KLF4;;chr6:126102339..126102351,+!p12@NCOA7!0.67!3.66!NCOA7;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.36!IFI16;;chr22:38597987..38598021,+!p2@MAFF!0.66!24.94!MAFF;;chr2:157189180..157189290,-!p1@NR4A2!0.66!21.51!NR4A2;;chr19:16435523..16435619,+!p2@KLF2!0.65!5.03!KLF2;;chr16:31076332..31076388,-!p3@ZNF668!0.65!3.43!ZNF668;;chr2:102091566..102091581,-!p1@RFX8!0.65!3.43!RFX8;;chr3:178789522..178789564,-!p2@ZMAT3!0.64!28.83!ZMAT3;;chr11:65687158..65687216,+!p4@DRAP1!0.64!22.43!DRAP1;;chr12:80085255..80085284,-!p9@PAWR!0.64!5.26!PAWR;;chr11:65667846..65667868,-!p1@FOSL1!0.63!103.89!FOSL1;;chr18:3451646..3451691,+!p3@TGIF1!0.63!9.84!TGIF1;;chr22:38598057..38598071,+!p3@MAFF!0.63!8.47!MAFF;;chr2:46612334..46612349,+!p6@EPAS1!0.63!4.58!EPAS1;;chr18:3450334..3450341,+!p15@TGIF1!0.63!4.35!TGIF1;;chr12:54447599..54447630,+!p3@HOXC4!0.63!4.12!HOXC4;;chr5:137801160..137801176,+!p1@EGR1!0.62!376.44!EGR1;;chr1:151032782..151032801,+!p4@MLLT11!0.62!7.09!MLLT11;;chr5:72744445..72744466,-!p2@FOXD1!0.62!5.72!FOXD1;;chr18:19749386..19749404,+!p2@GATA6!0.62!4.81!GATA6;;chr1:170632477..170632506,+!p6@PRRX1!0.62!3.20!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!0.62!3.20!RFX8;;chr7:14029283..14029311,-!p1@ETV1!0.61!19.45!ETV1;;chr10:111985713..111985774,+!p2@MXI1!0.60!34.33!MXI1;;chr18:3449527..3449582,+!p6@TGIF1!0.60!6.41!TGIF1;;chr12:72056749..72056767,+!p6@THAP2!0.60!3.43!THAP2;;chr10:64018918..64018936,+!p2@ZNF365!0.60!2.97!ZNF365;;chr1:170632051..170632081,+!p16@PRRX1!0.60!2.97!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!0.59!78.26!AEBP1;;chr10:63809106..63809127,+!p1@ARID5B!0.59!47.60!ARID5B;;chr7:19157248..19157268,-!p1@TWIST1!0.59!9.38!TWIST1;;chr3:126076264..126076305,-!p2@KLF15!0.59!4.35!KLF15;;chr18:3450161..3450183,+!p1@TGIF1!0.58!118.77!TGIF1;;chr20:50721803..50721857,-!p2@ZFP64!0.58!4.81!ZFP64;;chr1:221052840..221052875,+!p4@HLX!0.58!3.43!HLX;;chr3:141087393..141087426,+!p3@ZBTB38!0.57!13.04!ZBTB38;;chr10:64576105..64576133,-!p1@EGR2!0.57!6.41!EGR2;;chr7:28448995..28449011,+!p4@CREB5!0.57!4.12!CREB5;;chr7:115670804..115670825,-!p1@TFEC!0.57!2.75!TFEC;;chr1:170632028..170632043,+!p20@PRRX1!0.57!2.75!PRRX1;;chr1:221054853..221054873,+!p9@HLX!0.57!2.75!HLX;;chr21:30671690..30671762,+!p2@BACH1!0.56!10.76!BACH1;;chr7:44143978..44143989,+!p2@AEBP1!0.56!5.49!AEBP1;;chr15:37391271..37391376,-!p5@MEIS2!0.56!5.49!MEIS2;;chr16:86544113..86544145,+!p1@FOXF1!0.56!3.43!FOXF1;;chr1:170632959..170632987,+!p4@PRRX1!0.56!2.97!PRRX1;;chr13:45010939..45011033,-!p1@TSC22D1!0.55!215.57!TSC22D1;;chr14:62162285..62162296,+!p3@HIF1A!0.55!16.48!HIF1A;;chr12:66218598..66218645,+!p2@HMGA2!0.55!14.42!HMGA2;;chr18:3449821..3449860,+!p7@TGIF1!0.55!5.26!TGIF1;;chr19:47922750..47922795,-!p1@MEIS3!0.55!4.58!MEIS3;;chr1:170632683..170632696,+!p12@PRRX1!0.55!2.52!PRRX1;;chr7:1577899..1577943,+!p3@MAFK!0.55!2.52!MAFK;;chr19:16435625..16435682,+!p1@KLF2!0.54!101.83!KLF2;;chr2:101436564..101436647,+!p1@NPAS2!0.54!64.53!NPAS2;;chr17:46621937..46621966,-!p2@HOXB2!0.54!8.01!HOXB2;;chr17:46622070..46622109,-!p1@HOXB2!0.54!6.41!HOXB2;;chr17:20492136..20492165,+!p1@MEIS3P2!0.54!4.35!MEIS3P2;;chr12:26277817..26277863,-!p2@BHLHE41!0.54!3.66!BHLHE41;;chr9:35732647..35732678,+!p2@CREB3!0.53!16.71!CREB3;;chr2:178129358..178129403,-!p5@NFE2L2!0.53!11.90!NFE2L2;;chr5:321810..321877,+!p1@AHRR!0.53!9.15!AHRR;;chr9:110251836..110251887,-!p4@KLF4!0.53!3.43!KLF4;;chr3:126076242..126076257,-!p1@KLF15!0.53!3.20!KLF15;;chr12:56753869..56753930,-!p1@STAT2!0.52!133.41!STAT2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.52!36.61!ZC3H12A;;chr7:28448965..28448994,+!p2@CREB5!0.52!10.07!CREB5;;chr18:3449586..3449617,+!p8@TGIF1!0.52!4.12!TGIF1;;chr22:38598042..38598052,+!p4@MAFF!0.52!4.12!MAFF;;chr1:158985493..158985535,+!p4@IFI16!0.52!3.89!IFI16;;chr5:137804130..137804156,+!p5@EGR1!0.52!2.52!EGR1;;chr1:170632723..170632739,+!p8@PRRX1!0.52!2.29!PRRX1;;chr11:65668011..65668020,-!p3@FOSL1!0.52!2.29!FOSL1;;chr12:66218904..66218913,+!p11@HMGA2!0.52!2.29!HMGA2;;chr15:67418177..67418204,+!p9@SMAD3!0.52!2.29!SMAD3;;chr12:57914286..57914304,-!p1@DDIT3!0.51!106.18!DDIT3;;chr14:62162258..62162269,+!p2@HIF1A!0.51!28.15!HIF1A;;chr9:132427972..132428056,+!p1@PRRX2!0.51!3.20!PRRX2;;chr22:29196433..29196445,-!p4@XBP1!0.51!2.52!XBP1;;chr10:22292613..22292674,-!p1@DNAJC1!0.50!85.13!DNAJC1;;chr4:4861385..4861398,+!p1@MSX1!0.50!8.01!MSX1;;chr12:66218255..66218304,+!p3@HMGA2!0.50!7.09!HMGA2;;chr6:126240380..126240430,+!p2@NCOA7!0.50!6.87!NCOA7;;chr6:32095523..32095564,-!p2@ATF6B!0.50!3.20!ATF6B;;chr2:8822176..8822196,+!p1@ID2!0.49!398.18!ID2;;chr20:48807351..48807384,+!p1@CEBPB!0.49!290.63!CEBPB;;chr9:35732592..35732640,+!p1@CREB3!0.49!36.84!CREB3;;chr12:26277956..26277980,-!p1@BHLHE41!0.49!9.61!BHLHE41;;chr10:22292591..22292606,-!p2@DNAJC1!0.49!3.89!DNAJC1;;chr2:85980951..85981004,+!p1@ATOH8!0.49!3.89!ATOH8;;chr12:72056773..72056796,+!p3@THAP2!0.49!2.97!THAP2;;chr17:46675420..46675465,-!p3@HOXB6!0.49!2.52!HOXB6;;chr3:21792790..21792824,-!p4@ZNF385D!0.49!2.06!ZNF385D;;chr7:27169801..27169844,-!p2@HOXA4!0.49!2.06!HOXA4;;chr7:27183263..27183284,-!p2@HOXA5!0.49!2.06!HOXA5;;chr7:28449015..28449024,+!p6@CREB5!0.49!2.06!CREB5;;chr8:72756522..72756533,-!p13@MSC!0.49!2.06!MSC;;chr10:45495946..45495976,+!p2@ZNF22!0.49!2.06!ZNF22;;chr1:170633245..170633256,+!p14@PRRX1!0.49!2.06!PRRX1;;chr1:221053444..221053473,+!p8@HLX!0.49!2.06!HLX;;chr7:17338266..17338282,+!p1@AHR!0.48!29.29!AHR;;chr5:72744594..72744609,-!p1@FOXD1!0.48!11.90!FOXD1;;chr8:22550982..22550999,-!p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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000569;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000011,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
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|creation_date=
|def=
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|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000271
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg38.nobarcode.ctss.bed.gz
|id=FF:11752-123G6
|is_a=EFO:0002091;;FF:0000271
|is_obsolete=
|library_id=CNhs12368
|library_id_phase_based=2:CNhs12368
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11752
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11752
|name=mesenchymal precursor cell - cardiac, donor1
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
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|profile_hcage=CNhs12368,LSID914,release011,COMPLETED
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.46567
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.05
|rna_od260/280=2.02
|rna_position=G6
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G6
|rna_weight_ug=34.92525
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=HH-337-AD
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.73575234031302e-226!GO:0005737;cytoplasm;5.10466931660711e-184!GO:0044444;cytoplasmic part;1.7332857575946e-148!GO:0043231;intracellular membrane-bound organelle;3.93977153215821e-144!GO:0043227;membrane-bound organelle;7.30655620083082e-144!GO:0043226;organelle;2.48386042570342e-140!GO:0043229;intracellular organelle;4.80821246858677e-140!GO:0044422;organelle part;3.36341786525333e-103!GO:0044446;intracellular organelle part;8.86442111773286e-102!GO:0030529;ribonucleoprotein complex;5.97231150236943e-74!GO:0032991;macromolecular complex;3.12815614029407e-70!GO:0044238;primary metabolic process;3.80791444054507e-70!GO:0044237;cellular metabolic process;6.15882609356907e-70!GO:0005515;protein binding;2.08548715376715e-64!GO:0005739;mitochondrion;9.32124350170609e-63!GO:0043170;macromolecule metabolic process;4.5342990186722e-61!GO:0031090;organelle membrane;2.15712929547175e-56!GO:0043233;organelle lumen;2.36413085813886e-55!GO:0031974;membrane-enclosed lumen;2.36413085813886e-55!GO:0003723;RNA binding;2.80493455284357e-55!GO:0019538;protein metabolic process;1.9984592084824e-51!GO:0005840;ribosome;8.80241313062511e-49!GO:0006412;translation;1.11045035742618e-46!GO:0044260;cellular macromolecule metabolic process;4.14287752925882e-46!GO:0009058;biosynthetic process;1.15373215622364e-45!GO:0044428;nuclear part;2.26939134431745e-45!GO:0044267;cellular protein metabolic process;3.22813331008226e-45!GO:0015031;protein transport;4.19915961096531e-44!GO:0003735;structural constituent of ribosome;4.05933602161166e-43!GO:0033036;macromolecule localization;1.06681855241624e-42!GO:0005829;cytosol;5.48191550469015e-42!GO:0045184;establishment of protein localization;1.67718669857329e-41!GO:0044429;mitochondrial part;4.67450538936013e-41!GO:0008104;protein localization;1.14475160013822e-40!GO:0009059;macromolecule biosynthetic process;3.54944132575205e-39!GO:0044249;cellular biosynthetic process;7.73148588399542e-39!GO:0033279;ribosomal subunit;8.5399244976998e-39!GO:0006396;RNA processing;1.82009138798572e-36!GO:0005634;nucleus;4.71977899132578e-36!GO:0031967;organelle envelope;9.33510592856675e-35!GO:0031975;envelope;2.13456125669506e-34!GO:0043234;protein complex;1.62484083149771e-32!GO:0016043;cellular component organization and biogenesis;8.83110085182737e-32!GO:0046907;intracellular transport;1.5689272074826e-30!GO:0005783;endoplasmic reticulum;3.54319633477094e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.23780164618869e-29!GO:0016071;mRNA metabolic process;1.02960470482477e-28!GO:0006886;intracellular protein transport;1.88460564086829e-28!GO:0031981;nuclear lumen;2.752464640753e-28!GO:0005740;mitochondrial envelope;1.54734235097926e-27!GO:0010467;gene expression;8.02818727892927e-27!GO:0043283;biopolymer metabolic process;2.704922283369e-26!GO:0008380;RNA splicing;2.7228056316807e-26!GO:0031966;mitochondrial membrane;4.98025267908572e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.75913937835364e-25!GO:0006397;mRNA processing;1.48914510077439e-24!GO:0012505;endomembrane system;2.32196053346644e-24!GO:0044432;endoplasmic reticulum part;2.34902213050615e-24!GO:0006457;protein folding;2.42875051891917e-24!GO:0019866;organelle inner membrane;1.01841547176088e-23!GO:0006119;oxidative phosphorylation;3.70621446221224e-23!GO:0044445;cytosolic part;4.95551777185762e-23!GO:0005743;mitochondrial inner membrane;8.70784582293135e-23!GO:0065003;macromolecular complex assembly;2.78350208568353e-21!GO:0015935;small ribosomal subunit;2.10559144523033e-20!GO:0044455;mitochondrial membrane part;1.19854610898302e-19!GO:0048770;pigment granule;2.13490376800803e-19!GO:0042470;melanosome;2.13490376800803e-19!GO:0015934;large ribosomal subunit;2.69778108010392e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.9114216752477e-19!GO:0051641;cellular localization;8.46598580555681e-19!GO:0051649;establishment of cellular localization;1.10371298493274e-18!GO:0022607;cellular component assembly;2.77151248251963e-18!GO:0005681;spliceosome;2.92540266668407e-18!GO:0051186;cofactor metabolic process;2.99908672919691e-18!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.98060525943411e-18!GO:0005794;Golgi apparatus;1.05058735319009e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.17531951793917e-17!GO:0016462;pyrophosphatase activity;1.23087060395457e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.70682905548821e-17!GO:0005789;endoplasmic reticulum membrane;3.5098583348571e-17!GO:0017111;nucleoside-triphosphatase activity;5.46134101150073e-17!GO:0005746;mitochondrial respiratory chain;6.95444055246727e-17!GO:0051082;unfolded protein binding;9.69267334944423e-17!GO:0005654;nucleoplasm;1.01947959551169e-16!GO:0031980;mitochondrial lumen;1.92189037831279e-16!GO:0005759;mitochondrial matrix;1.92189037831279e-16!GO:0022618;protein-RNA complex assembly;2.27569357921749e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.79974777293544e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.00659511128408e-16!GO:0043285;biopolymer catabolic process;8.37458581103176e-16!GO:0019941;modification-dependent protein catabolic process;8.75679962952235e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.75679962952235e-16!GO:0044257;cellular protein catabolic process;1.07921405038372e-15!GO:0044265;cellular macromolecule catabolic process;1.10847674403646e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.36481333447551e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.4988315385505e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.63108738596242e-15!GO:0016874;ligase activity;3.5353396981767e-15!GO:0006512;ubiquitin cycle;3.71526298325608e-15!GO:0006996;organelle organization and biogenesis;5.2534795381381e-15!GO:0030163;protein catabolic process;1.0849675300097e-14!GO:0009057;macromolecule catabolic process;1.24115524341486e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.34357697156468e-14!GO:0006732;coenzyme metabolic process;1.536211432102e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.04976458821622e-14!GO:0003954;NADH dehydrogenase activity;2.04976458821622e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.04976458821622e-14!GO:0044248;cellular catabolic process;3.00183069215573e-14!GO:0008134;transcription factor binding;3.11337360992107e-14!GO:0006605;protein targeting;3.84384268569244e-14!GO:0008135;translation factor activity, nucleic acid binding;5.08668263949955e-14!GO:0048193;Golgi vesicle transport;6.88494288879825e-14!GO:0005793;ER-Golgi intermediate compartment;7.29490158994869e-14!GO:0044451;nucleoplasm part;8.52327043441738e-14!GO:0000166;nucleotide binding;8.89633014817723e-14!GO:0005730;nucleolus;1.80633757306985e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.83243678874546e-13!GO:0005761;mitochondrial ribosome;4.38987265123524e-13!GO:0000313;organellar ribosome;4.38987265123524e-13!GO:0016192;vesicle-mediated transport;4.75193722518976e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.76559308365888e-13!GO:0042773;ATP synthesis coupled electron transport;6.76559308365888e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.23078290472776e-12!GO:0045271;respiratory chain complex I;1.23078290472776e-12!GO:0005747;mitochondrial respiratory chain complex I;1.23078290472776e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.90902591802997e-12!GO:0012501;programmed cell death;5.85190471893076e-12!GO:0009055;electron carrier activity;6.38180900094805e-12!GO:0043228;non-membrane-bound organelle;6.95320107498582e-12!GO:0043232;intracellular non-membrane-bound organelle;6.95320107498582e-12!GO:0006915;apoptosis;1.25679409539472e-11!GO:0043412;biopolymer modification;1.73954683415003e-11!GO:0003743;translation initiation factor activity;3.07806722293597e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.47883666287188e-11!GO:0006163;purine nucleotide metabolic process;7.28490213183767e-11!GO:0006413;translational initiation;9.22542694453431e-11!GO:0009259;ribonucleotide metabolic process;1.14453094604912e-10!GO:0008219;cell death;1.39270728690986e-10!GO:0016265;death;1.39270728690986e-10!GO:0009150;purine ribonucleotide metabolic process;1.48470494334591e-10!GO:0006464;protein modification process;1.80843865623004e-10!GO:0016491;oxidoreductase activity;4.30904965749556e-10!GO:0009199;ribonucleoside triphosphate metabolic process;5.29155024797516e-10!GO:0006164;purine nucleotide biosynthetic process;5.30118588891529e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.5082466337383e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.50956687512393e-10!GO:0009144;purine nucleoside triphosphate metabolic process;6.50956687512393e-10!GO:0005773;vacuole;7.42684756998272e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;8.9316530304384e-10!GO:0000375;RNA splicing, via transesterification reactions;8.9316530304384e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.9316530304384e-10!GO:0017076;purine nucleotide binding;9.02691167526244e-10!GO:0003676;nucleic acid binding;9.3838474689627e-10!GO:0051188;cofactor biosynthetic process;9.70679740174652e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.03279286052771e-09!GO:0009141;nucleoside triphosphate metabolic process;1.09587982137991e-09!GO:0048523;negative regulation of cellular process;1.24849056068905e-09!GO:0015986;ATP synthesis coupled proton transport;1.44860299910227e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.44860299910227e-09!GO:0005768;endosome;1.50513308314207e-09!GO:0005788;endoplasmic reticulum lumen;1.60212637759045e-09!GO:0032553;ribonucleotide binding;1.6358531245824e-09!GO:0032555;purine ribonucleotide binding;1.6358531245824e-09!GO:0042254;ribosome biogenesis and assembly;1.6358531245824e-09!GO:0006446;regulation of translational initiation;2.28609219064345e-09!GO:0009260;ribonucleotide biosynthetic process;2.59269917693362e-09!GO:0009056;catabolic process;3.42041704773212e-09!GO:0019829;cation-transporting ATPase activity;3.42041704773212e-09!GO:0009142;nucleoside triphosphate biosynthetic process;3.60822693437749e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.60822693437749e-09!GO:0003712;transcription cofactor activity;4.20488667609966e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.44291970340509e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.44291970340509e-09!GO:0046034;ATP metabolic process;4.70132866171539e-09!GO:0016070;RNA metabolic process;6.80142854534022e-09!GO:0006259;DNA metabolic process;9.51245626738798e-09!GO:0003924;GTPase activity;1.10519069331493e-08!GO:0008565;protein transporter activity;1.18820983024752e-08!GO:0008639;small protein conjugating enzyme activity;1.25817574049568e-08!GO:0005635;nuclear envelope;1.68037734555318e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.9385797133579e-08!GO:0009060;aerobic respiration;2.0527617192557e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.06768418847209e-08!GO:0004842;ubiquitin-protein ligase activity;2.11370141387448e-08!GO:0000323;lytic vacuole;2.5278418532376e-08!GO:0005764;lysosome;2.5278418532376e-08!GO:0006754;ATP biosynthetic process;2.86054692016479e-08!GO:0006753;nucleoside phosphate metabolic process;2.86054692016479e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.14556271956957e-08!GO:0044431;Golgi apparatus part;4.19025418650698e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.25401823147935e-08!GO:0019787;small conjugating protein ligase activity;4.48358769146246e-08!GO:0009108;coenzyme biosynthetic process;4.7858373442979e-08!GO:0048519;negative regulation of biological process;5.24049160384435e-08!GO:0045333;cellular respiration;6.79949972964825e-08!GO:0016887;ATPase activity;6.95605569834597e-08!GO:0006399;tRNA metabolic process;7.29894164844915e-08!GO:0043687;post-translational protein modification;8.52644406575459e-08!GO:0031965;nuclear membrane;8.88649260029175e-08!GO:0030120;vesicle coat;9.93308534659297e-08!GO:0030662;coated vesicle membrane;9.93308534659297e-08!GO:0016881;acid-amino acid ligase activity;1.24415332229463e-07!GO:0043069;negative regulation of programmed cell death;1.26580496008154e-07!GO:0006913;nucleocytoplasmic transport;1.43695217099409e-07!GO:0016604;nuclear body;1.48524681609966e-07!GO:0006461;protein complex assembly;1.99113392238155e-07!GO:0042623;ATPase activity, coupled;2.01441377592457e-07!GO:0051169;nuclear transport;2.06511754592508e-07!GO:0043066;negative regulation of apoptosis;2.33474897983017e-07!GO:0051246;regulation of protein metabolic process;2.38612205002638e-07!GO:0007005;mitochondrion organization and biogenesis;2.48768048960055e-07!GO:0017038;protein import;2.81269090135701e-07!GO:0006916;anti-apoptosis;3.08448082774107e-07!GO:0043067;regulation of programmed cell death;3.51016419564217e-07!GO:0008654;phospholipid biosynthetic process;3.54139098733408e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.73414696652492e-07!GO:0016787;hydrolase activity;3.74287920893703e-07!GO:0044453;nuclear membrane part;4.11672321994576e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.22257585870139e-07!GO:0044440;endosomal part;4.5557959052167e-07!GO:0010008;endosome membrane;4.5557959052167e-07!GO:0042981;regulation of apoptosis;5.12527603943806e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.80535820467535e-07!GO:0009117;nucleotide metabolic process;6.63993851017992e-07!GO:0006752;group transfer coenzyme metabolic process;6.91324928529746e-07!GO:0006091;generation of precursor metabolites and energy;7.43761819703197e-07!GO:0005770;late endosome;7.76519605191871e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.21512609305275e-07!GO:0051187;cofactor catabolic process;1.03833656835024e-06!GO:0048475;coated membrane;1.04513987552965e-06!GO:0030117;membrane coat;1.04513987552965e-06!GO:0016607;nuclear speck;1.39583840226298e-06!GO:0051789;response to protein stimulus;1.4408405728008e-06!GO:0006986;response to unfolded protein;1.4408405728008e-06!GO:0006099;tricarboxylic acid cycle;1.6964583846835e-06!GO:0046356;acetyl-CoA catabolic process;1.6964583846835e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.77767485287666e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.78054912219557e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.78054912219557e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.78054912219557e-06!GO:0030554;adenyl nucleotide binding;1.92497309190399e-06!GO:0045454;cell redox homeostasis;2.10732586152948e-06!GO:0005524;ATP binding;2.12240747709671e-06!GO:0043038;amino acid activation;2.57647117705899e-06!GO:0006418;tRNA aminoacylation for protein translation;2.57647117705899e-06!GO:0043039;tRNA aminoacylation;2.57647117705899e-06!GO:0000139;Golgi membrane;2.65558446581306e-06!GO:0065002;intracellular protein transport across a membrane;2.83226285250066e-06!GO:0032559;adenyl ribonucleotide binding;2.86855956650531e-06!GO:0004298;threonine endopeptidase activity;2.8745143506907e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.94557334006436e-06!GO:0031988;membrane-bound vesicle;3.02077234241528e-06!GO:0009109;coenzyme catabolic process;3.06733400661355e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.1843421541084e-06!GO:0045259;proton-transporting ATP synthase complex;4.04080744951045e-06!GO:0006974;response to DNA damage stimulus;4.10658220101253e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.95083740208635e-06!GO:0008026;ATP-dependent helicase activity;5.30747723950818e-06!GO:0005525;GTP binding;5.3922283683494e-06!GO:0003714;transcription corepressor activity;5.45474774344327e-06!GO:0006084;acetyl-CoA metabolic process;6.60101829471307e-06!GO:0007049;cell cycle;7.19247096823413e-06!GO:0006364;rRNA processing;7.28186113474746e-06!GO:0006613;cotranslational protein targeting to membrane;7.48835531803447e-06!GO:0006366;transcription from RNA polymerase II promoter;8.01013833125564e-06!GO:0016072;rRNA metabolic process;8.86791754182047e-06!GO:0045786;negative regulation of progression through cell cycle;9.07490289116006e-06!GO:0016853;isomerase activity;9.80009443526156e-06!GO:0031982;vesicle;1.2759110620847e-05!GO:0031410;cytoplasmic vesicle;1.51323529926079e-05!GO:0031968;organelle outer membrane;1.67737374658026e-05!GO:0019843;rRNA binding;1.79918950606044e-05!GO:0004386;helicase activity;1.85037461255797e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.85058531382415e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.21242854041502e-05!GO:0019867;outer membrane;2.30608801621836e-05!GO:0032446;protein modification by small protein conjugation;2.36188961579593e-05!GO:0016859;cis-trans isomerase activity;2.47178417116667e-05!GO:0051726;regulation of cell cycle;2.6827413101406e-05!GO:0000245;spliceosome assembly;2.68312017866012e-05!GO:0005798;Golgi-associated vesicle;2.84329815387076e-05!GO:0016564;transcription repressor activity;2.93441583177348e-05!GO:0000074;regulation of progression through cell cycle;3.11605688846182e-05!GO:0032561;guanyl ribonucleotide binding;3.11674010859502e-05!GO:0019001;guanyl nucleotide binding;3.11674010859502e-05!GO:0033116;ER-Golgi intermediate compartment membrane;3.11674010859502e-05!GO:0005643;nuclear pore;3.64436303414292e-05!GO:0046474;glycerophospholipid biosynthetic process;3.86006284732864e-05!GO:0016567;protein ubiquitination;3.96349666028976e-05!GO:0031252;leading edge;4.26800048490376e-05!GO:0030867;rough endoplasmic reticulum membrane;4.85636618600008e-05!GO:0005769;early endosome;6.71384359281238e-05!GO:0016740;transferase activity;7.64358145966796e-05!GO:0008361;regulation of cell size;7.76099213612554e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.61416014696091e-05!GO:0051170;nuclear import;9.11106025395993e-05!GO:0005048;signal sequence binding;9.36650113090913e-05!GO:0005762;mitochondrial large ribosomal subunit;0.000101138634288907!GO:0000315;organellar large ribosomal subunit;0.000101138634288907!GO:0008610;lipid biosynthetic process;0.000104874737473818!GO:0004576;oligosaccharyl transferase activity;0.000110846331381598!GO:0015980;energy derivation by oxidation of organic compounds;0.000113223479949172!GO:0005905;coated pit;0.000118370993862955!GO:0016049;cell growth;0.000122448322439643!GO:0006612;protein targeting to membrane;0.000127673932656076!GO:0000151;ubiquitin ligase complex;0.000129317375052785!GO:0006606;protein import into nucleus;0.000133460562787557!GO:0050794;regulation of cellular process;0.000142427804332399!GO:0043021;ribonucleoprotein binding;0.000145596705135175!GO:0043566;structure-specific DNA binding;0.000149369518423917!GO:0016126;sterol biosynthetic process;0.000153783155103534!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000154282487298306!GO:0000314;organellar small ribosomal subunit;0.00015531180131378!GO:0005763;mitochondrial small ribosomal subunit;0.00015531180131378!GO:0046930;pore complex;0.000155695477388531!GO:0005741;mitochondrial outer membrane;0.000158344510634089!GO:0031324;negative regulation of cellular metabolic process;0.000158344510634089!GO:0046467;membrane lipid biosynthetic process;0.000163617047627195!GO:0006281;DNA repair;0.000173781521866885!GO:0001558;regulation of cell growth;0.000202112175323646!GO:0009719;response to endogenous stimulus;0.000204585032576917!GO:0008250;oligosaccharyl transferase complex;0.000215365491224426!GO:0046489;phosphoinositide biosynthetic process;0.000230080512692769!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00023565008453986!GO:0005667;transcription factor complex;0.000252969378926636!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000271943091225733!GO:0015399;primary active transmembrane transporter activity;0.000271943091225733!GO:0006793;phosphorus metabolic process;0.000287562685510708!GO:0006796;phosphate metabolic process;0.000287562685510708!GO:0007243;protein kinase cascade;0.000297369374121696!GO:0018196;peptidyl-asparagine modification;0.000346577051438321!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000346577051438321!GO:0003724;RNA helicase activity;0.000356357803202297!GO:0006650;glycerophospholipid metabolic process;0.000369983707471164!GO:0003697;single-stranded DNA binding;0.000385842351190014!GO:0030133;transport vesicle;0.000396693530941434!GO:0009165;nucleotide biosynthetic process;0.000410187506056816!GO:0022890;inorganic cation transmembrane transporter activity;0.000412555321953442!GO:0030176;integral to endoplasmic reticulum membrane;0.000462194999063344!GO:0009892;negative regulation of metabolic process;0.00055105496590928!GO:0005885;Arp2/3 protein complex;0.00058900111846491!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000598497919292272!GO:0005774;vacuolar membrane;0.000630171537943965!GO:0044262;cellular carbohydrate metabolic process;0.000647154366682242!GO:0030663;COPI coated vesicle membrane;0.000655889717183354!GO:0030126;COPI vesicle coat;0.000655889717183354!GO:0043623;cellular protein complex assembly;0.000655889717183354!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000684890858146962!GO:0005791;rough endoplasmic reticulum;0.000684890858146962!GO:0050657;nucleic acid transport;0.000684890858146962!GO:0051236;establishment of RNA localization;0.000684890858146962!GO:0050658;RNA transport;0.000684890858146962!GO:0006403;RNA localization;0.000707386082927852!GO:0003713;transcription coactivator activity;0.000712454999454564!GO:0006626;protein targeting to mitochondrion;0.000741777385430667!GO:0016310;phosphorylation;0.000753603654061903!GO:0015992;proton transport;0.000761800037353297!GO:0006818;hydrogen transport;0.00076910241708684!GO:0016779;nucleotidyltransferase activity;0.000796045195965354!GO:0043681;protein import into mitochondrion;0.000798623360469957!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000827101800796305!GO:0051920;peroxiredoxin activity;0.000827289746752901!GO:0031072;heat shock protein binding;0.000833362186259341!GO:0007040;lysosome organization and biogenesis;0.000931798011552937!GO:0019752;carboxylic acid metabolic process;0.000985571826089002!GO:0006082;organic acid metabolic process;0.00100625366913402!GO:0016568;chromatin modification;0.00107161912449762!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00109983799275179!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00117740940903404!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00120432431952015!GO:0006979;response to oxidative stress;0.00120432431952015!GO:0022402;cell cycle process;0.00138488636186379!GO:0006497;protein amino acid lipidation;0.00146585719197479!GO:0048522;positive regulation of cellular process;0.00149827648449136!GO:0004177;aminopeptidase activity;0.00152255314970202!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00160225578029745!GO:0030433;ER-associated protein catabolic process;0.00162201324922976!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00162201324922976!GO:0006839;mitochondrial transport;0.00173934945769359!GO:0007050;cell cycle arrest;0.0017714280753412!GO:0044437;vacuolar part;0.00187734257488606!GO:0048500;signal recognition particle;0.00193809092592937!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00193809092592937!GO:0030036;actin cytoskeleton organization and biogenesis;0.00206451534635041!GO:0006323;DNA packaging;0.00206874455405959!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0020857928069089!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0020857928069089!GO:0006984;ER-nuclear signaling pathway;0.00209009965349853!GO:0007033;vacuole organization and biogenesis;0.00216370732431669!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00216370732431669!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00216370732431669!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00216370732431669!GO:0006891;intra-Golgi vesicle-mediated transport;0.00220817320229982!GO:0016563;transcription activator activity;0.00223140757383794!GO:0005765;lysosomal membrane;0.00226555324623155!GO:0016197;endosome transport;0.00234049905315972!GO:0030137;COPI-coated vesicle;0.00239248762743031!GO:0003899;DNA-directed RNA polymerase activity;0.00244053096471279!GO:0006695;cholesterol biosynthetic process;0.00257225813838295!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00274561412584625!GO:0008632;apoptotic program;0.0028425724820823!GO:0046483;heterocycle metabolic process;0.0029092237226431!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00293229151049077!GO:0043492;ATPase activity, coupled to movement of substances;0.00298241350816514!GO:0051427;hormone receptor binding;0.00301353202907706!GO:0016044;membrane organization and biogenesis;0.00320572969017134!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00320572969017134!GO:0015002;heme-copper terminal oxidase activity;0.00320572969017134!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00320572969017134!GO:0004129;cytochrome-c oxidase activity;0.00320572969017134!GO:0006506;GPI anchor biosynthetic process;0.00334830556898123!GO:0030132;clathrin coat of coated pit;0.00343167654692142!GO:0006643;membrane lipid metabolic process;0.00344923931729931!GO:0048471;perinuclear region of cytoplasm;0.00345568708150876!GO:0006509;membrane protein ectodomain proteolysis;0.00347354773397904!GO:0033619;membrane protein proteolysis;0.00347354773397904!GO:0007006;mitochondrial membrane organization and biogenesis;0.00358840996193651!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00362360399722387!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00362360399722387!GO:0050662;coenzyme binding;0.00362360399722387!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00362819269473923!GO:0007034;vacuolar transport;0.00383466669863762!GO:0042158;lipoprotein biosynthetic process;0.0038583162986664!GO:0051087;chaperone binding;0.00392888725771059!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00394288870214793!GO:0045047;protein targeting to ER;0.00394288870214793!GO:0030384;phosphoinositide metabolic process;0.00416674934342271!GO:0019899;enzyme binding;0.00428549646955934!GO:0006749;glutathione metabolic process;0.00439224909815953!GO:0006505;GPI anchor metabolic process;0.00439224909815953!GO:0031902;late endosome membrane;0.00454087546505103!GO:0006118;electron transport;0.00460521006465874!GO:0030658;transport vesicle membrane;0.00462358968259804!GO:0000096;sulfur amino acid metabolic process;0.00463985395916631!GO:0006383;transcription from RNA polymerase III promoter;0.0047711319355107!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00477367202980295!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00477367202980295!GO:0040008;regulation of growth;0.00478027857171128!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00486565231321265!GO:0006790;sulfur metabolic process;0.00511278532144531!GO:0001872;zymosan binding;0.00511805717820414!GO:0001878;response to yeast;0.00511805717820414!GO:0035257;nuclear hormone receptor binding;0.00515123248093294!GO:0006950;response to stress;0.00562472225826909!GO:0065009;regulation of a molecular function;0.00564033776365741!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.005807406406092!GO:0006414;translational elongation;0.0058394861249999!GO:0051287;NAD binding;0.0058394861249999!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00586836527877035!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00601758017602806!GO:0051028;mRNA transport;0.00604670023716669!GO:0046519;sphingoid metabolic process;0.00604670023716669!GO:0051252;regulation of RNA metabolic process;0.00604933481859229!GO:0009967;positive regulation of signal transduction;0.00623460569100715!GO:0030134;ER to Golgi transport vesicle;0.00637643788064079!GO:0008312;7S RNA binding;0.00662837825274954!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00664634717347851!GO:0048487;beta-tubulin binding;0.00673463257321286!GO:0043284;biopolymer biosynthetic process;0.00696180499983816!GO:0043488;regulation of mRNA stability;0.00697099531352059!GO:0043487;regulation of RNA stability;0.00697099531352059!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00711647887169344!GO:0008033;tRNA processing;0.00713747140193525!GO:0007264;small GTPase mediated signal transduction;0.00721959121373563!GO:0043433;negative regulation of transcription factor activity;0.00728938953385273!GO:0003729;mRNA binding;0.00728938953385273!GO:0003756;protein disulfide isomerase activity;0.0073115791164783!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0073115791164783!GO:0008139;nuclear localization sequence binding;0.00739333524395899!GO:0045045;secretory pathway;0.00741378293785846!GO:0005813;centrosome;0.00776341314935441!GO:0016481;negative regulation of transcription;0.00801151633857198!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00837060592178143!GO:0050789;regulation of biological process;0.00852806862103846!GO:0030041;actin filament polymerization;0.00853508597877851!GO:0008186;RNA-dependent ATPase activity;0.00875176924558194!GO:0030029;actin filament-based process;0.0087528745471559!GO:0000049;tRNA binding;0.0087561380020322!GO:0008637;apoptotic mitochondrial changes;0.0089381179384897!GO:0003746;translation elongation factor activity;0.0091338034335275!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0091338034335275!GO:0030127;COPII vesicle coat;0.00919343313520685!GO:0012507;ER to Golgi transport vesicle membrane;0.00919343313520685!GO:0030968;unfolded protein response;0.00921366225959413!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00921515363080027!GO:0008180;signalosome;0.00927387759501854!GO:0006595;polyamine metabolic process;0.00929665696182053!GO:0033673;negative regulation of kinase activity;0.00936633521754655!GO:0006469;negative regulation of protein kinase activity;0.00936633521754655!GO:0031901;early endosome membrane;0.00938500140899162!GO:0050811;GABA receptor binding;0.00990281596809417!GO:0003690;double-stranded DNA binding;0.00993278745812599!GO:0030880;RNA polymerase complex;0.0100311946034047!GO:0042802;identical protein binding;0.0102684722818135!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0102684722818135!GO:0030659;cytoplasmic vesicle membrane;0.0109032924409455!GO:0043022;ribosome binding;0.0110481699697685!GO:0016272;prefoldin complex;0.0111233146859969!GO:0030503;regulation of cell redox homeostasis;0.0111542394430778!GO:0031418;L-ascorbic acid binding;0.0111542394430778!GO:0017166;vinculin binding;0.0112157055649919!GO:0030660;Golgi-associated vesicle membrane;0.0116491845897762!GO:0008652;amino acid biosynthetic process;0.0121626405827252!GO:0006644;phospholipid metabolic process;0.0121646472557987!GO:0051348;negative regulation of transferase activity;0.0122053313487791!GO:0006740;NADPH regeneration;0.0125028964020874!GO:0006098;pentose-phosphate shunt;0.0125028964020874!GO:0005869;dynactin complex;0.0126263692260627!GO:0006672;ceramide metabolic process;0.0126263692260627!GO:0006778;porphyrin metabolic process;0.012676332553954!GO:0033013;tetrapyrrole metabolic process;0.012676332553954!GO:0005815;microtubule organizing center;0.0130410109226634!GO:0048037;cofactor binding;0.0140257119808164!GO:0030118;clathrin coat;0.014043048776209!GO:0007041;lysosomal transport;0.0141341977655922!GO:0008234;cysteine-type peptidase activity;0.0156182271917022!GO:0044255;cellular lipid metabolic process;0.0161184462409719!GO:0001726;ruffle;0.0167295548872364!GO:0033559;unsaturated fatty acid metabolic process;0.0168023683820805!GO:0006636;unsaturated fatty acid biosynthetic process;0.0168023683820805!GO:0006260;DNA replication;0.0170767488456428!GO:0051270;regulation of cell motility;0.0175542115878759!GO:0065004;protein-DNA complex assembly;0.0183532336365197!GO:0000030;mannosyltransferase activity;0.0184208866119507!GO:0051276;chromosome organization and biogenesis;0.0185757515792624!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0188675764335824!GO:0006520;amino acid metabolic process;0.0188815297556005!GO:0016408;C-acyltransferase activity;0.0190018918408934!GO:0004004;ATP-dependent RNA helicase activity;0.0190892669165329!GO:0006767;water-soluble vitamin metabolic process;0.019090482818193!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0194865307024201!GO:0000428;DNA-directed RNA polymerase complex;0.0194865307024201!GO:0044433;cytoplasmic vesicle part;0.0197011179227977!GO:0008047;enzyme activator activity;0.0197339151659014!GO:0016860;intramolecular oxidoreductase activity;0.019910804697434!GO:0048144;fibroblast proliferation;0.0200234604081104!GO:0048145;regulation of fibroblast proliferation;0.0200234604081104!GO:0051128;regulation of cellular component organization and biogenesis;0.0200473362999546!GO:0008154;actin polymerization and/or depolymerization;0.0201103690470104!GO:0006467;protein thiol-disulfide exchange;0.020115480991766!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0202715168544255!GO:0030145;manganese ion binding;0.0203148406287362!GO:0005684;U2-dependent spliceosome;0.0205061709292612!GO:0030125;clathrin vesicle coat;0.0207412899435239!GO:0030665;clathrin coated vesicle membrane;0.0207412899435239!GO:0048518;positive regulation of biological process;0.0211220611978363!GO:0051059;NF-kappaB binding;0.0212530387239723!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0215729382218946!GO:0030027;lamellipodium;0.0219216117917075!GO:0005832;chaperonin-containing T-complex;0.0228293887409187!GO:0051168;nuclear export;0.0228728112495579!GO:0006402;mRNA catabolic process;0.0228728112495579!GO:0045792;negative regulation of cell size;0.0233686306778356!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.023480926862304!GO:0016363;nuclear matrix;0.0235891586760298!GO:0042168;heme metabolic process;0.0235891586760298!GO:0031625;ubiquitin protein ligase binding;0.0244416479598016!GO:0015631;tubulin binding;0.0247475830551634!GO:0044452;nucleolar part;0.0248009477031786!GO:0030833;regulation of actin filament polymerization;0.0249139529069127!GO:0000209;protein polyubiquitination;0.0250609016628366!GO:0007021;tubulin folding;0.0250609016628366!GO:0031543;peptidyl-proline dioxygenase activity;0.0252857662461815!GO:0006289;nucleotide-excision repair;0.0253932557996348!GO:0019798;procollagen-proline dioxygenase activity;0.0255571589119301!GO:0000059;protein import into nucleus, docking;0.0259407379332661!GO:0048146;positive regulation of fibroblast proliferation;0.0261809241321148!GO:0032940;secretion by cell;0.0264608439323164!GO:0006333;chromatin assembly or disassembly;0.0266538889672186!GO:0030308;negative regulation of cell growth;0.0267111882486677!GO:0022408;negative regulation of cell-cell adhesion;0.0268027710006424!GO:0048468;cell development;0.0268712822198291!GO:0035035;histone acetyltransferase binding;0.0268718826369773!GO:0006417;regulation of translation;0.0269899363985942!GO:0005862;muscle thin filament tropomyosin;0.0271067514669232!GO:0051101;regulation of DNA binding;0.0272813057696981!GO:0006914;autophagy;0.0284337700750247!GO:0003711;transcription elongation regulator activity;0.0288573485501419!GO:0031529;ruffle organization and biogenesis;0.0288573485501419!GO:0016125;sterol metabolic process;0.0294739362087273!GO:0015630;microtubule cytoskeleton;0.0294739362087273!GO:0006739;NADP metabolic process;0.0296108958704158!GO:0000339;RNA cap binding;0.0298628561276866!GO:0006354;RNA elongation;0.0302522212798686!GO:0012506;vesicle membrane;0.0304388162326784!GO:0035258;steroid hormone receptor binding;0.0304996047801812!GO:0030119;AP-type membrane coat adaptor complex;0.0317272211646724!GO:0007030;Golgi organization and biogenesis;0.032611225571195!GO:0006769;nicotinamide metabolic process;0.0327972918757958!GO:0030508;thiol-disulfide exchange intermediate activity;0.0333743012677425!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0334525078028257!GO:0032984;macromolecular complex disassembly;0.0334525078028257!GO:0015923;mannosidase activity;0.0336732419298491!GO:0006007;glucose catabolic process;0.0342457130002164!GO:0004287;prolyl oligopeptidase activity;0.0343299481790612!GO:0000097;sulfur amino acid biosynthetic process;0.0350287422157622!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0357612609321817!GO:0030521;androgen receptor signaling pathway;0.0362981991766478!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0364741226302389!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0364741226302389!GO:0051540;metal cluster binding;0.0366959515548044!GO:0051536;iron-sulfur cluster binding;0.0366959515548044!GO:0004228;gelatinase A activity;0.0374737035457038!GO:0001955;blood vessel maturation;0.0374737035457038!GO:0006518;peptide metabolic process;0.0378415347194524!GO:0008147;structural constituent of bone;0.0382155873432174!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0385253833455844!GO:0008320;protein transmembrane transporter activity;0.0385937436441779!GO:0051539;4 iron, 4 sulfur cluster binding;0.0387488769438489!GO:0001953;negative regulation of cell-matrix adhesion;0.0390406107642997!GO:0051881;regulation of mitochondrial membrane potential;0.0390406107642997!GO:0006779;porphyrin biosynthetic process;0.039585481561237!GO:0033014;tetrapyrrole biosynthetic process;0.039585481561237!GO:0006458;'de novo' protein folding;0.0402863030478198!GO:0051084;'de novo' posttranslational protein folding;0.0402863030478198!GO:0005801;cis-Golgi network;0.0402863030478198!GO:0022406;membrane docking;0.0402863030478198!GO:0048278;vesicle docking;0.0402863030478198!GO:0016251;general RNA polymerase II transcription factor activity;0.0405319066494397!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0406106805505336!GO:0032507;maintenance of cellular protein localization;0.0412492029697078!GO:0008538;proteasome activator activity;0.0420818034652341!GO:0019511;peptidyl-proline hydroxylation;0.0420818034652341!GO:0018208;peptidyl-proline modification;0.0420818034652341!GO:0019471;4-hydroxyproline metabolic process;0.0420818034652341!GO:0018401;peptidyl-proline hydroxylation to 4-hydroxy-L-proline;0.0420818034652341!GO:0009112;nucleobase metabolic process;0.0423392245336765!GO:0001527;microfibril;0.0423514294845747!GO:0006892;post-Golgi vesicle-mediated transport;0.0423514294845747!GO:0006807;nitrogen compound metabolic process;0.0432033636431466!GO:0045936;negative regulation of phosphate metabolic process;0.0432091087837116!GO:0001952;regulation of cell-matrix adhesion;0.0433540342834866!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0433540342834866!GO:0005669;transcription factor TFIID complex;0.0437285128029788!GO:0006904;vesicle docking during exocytosis;0.0437776822029705!GO:0006693;prostaglandin metabolic process;0.0466193952617405!GO:0006692;prostanoid metabolic process;0.0466193952617405!GO:0040011;locomotion;0.0470495390438351!GO:0051235;maintenance of localization;0.0470495390438351!GO:0030911;TPR domain binding;0.0471262559035605!GO:0008168;methyltransferase activity;0.0471262559035605!GO:0022884;macromolecule transmembrane transporter activity;0.0471262559035605!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0471262559035605!GO:0015036;disulfide oxidoreductase activity;0.04774230084409!GO:0030032;lamellipodium biogenesis;0.0485490213049401!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0488349998024153!GO:0016615;malate dehydrogenase activity;0.0493693416896978!GO:0005784;translocon complex;0.0493693416896978!GO:0031371;ubiquitin conjugating enzyme complex;0.0495202303242149!GO:0022411;cellular component disassembly;0.0495202303242149!GO:0008243;plasminogen activator activity;0.0495202303242149!GO:0031272;regulation of pseudopodium formation;0.0495202303242149!GO:0031269;pseudopodium formation;0.0495202303242149!GO:0031344;regulation of cell projection organization and biogenesis;0.0495202303242149!GO:0031268;pseudopodium organization and biogenesis;0.0495202303242149!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0495202303242149!GO:0031274;positive regulation of pseudopodium formation;0.0495202303242149!GO:0051098;regulation of binding;0.0496963322703759!GO:0009116;nucleoside metabolic process;0.0499071448877641
|sample_id=11752
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=NKX3-1:2.2371932277;XBP1:2.06143352007;HIF1A:1.81703629484;bHLH_family:1.7558351343;ALX4:1.75477194829;HSF1,2:1.3893086788;MAFB:1.30298949596;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.25568075011;ATF6:1.23363048148;TP53:1.19296830589;PAX1,9:1.11432470392;HOX{A5,B5}:1.10249756752;HLF:1.10110945074;EBF1:1.05741249054;AIRE:1.0290631758;NANOG{mouse}:1.01909357;SREBF1,2:1.00693230253;RXR{A,B,G}:1.00543966912;EN1,2:1.00209521458;TAL1_TCF{3,4,12}:0.986835739171;NFE2L2:0.96939828799;IKZF1:0.944081959895;HES1:0.912925813795;UFEwm:0.89099948531;HOX{A4,D4}:0.890771711779;ESR1:0.889542891017;NFE2L1:0.8874385209;ZNF238:0.86560113151;CEBPA,B_DDIT3:0.860383836885;NFATC1..3:0.768394001065;TLX2:0.708699160195;NFE2:0.702872471706;NFIX:0.660290195708;HMX1:0.657297085571;ELK1,4_GABP{A,B1}:0.627503534821;NKX2-1,4:0.593818417516;MYBL2:0.590990887219;TEAD1:0.590161558946;BACH2:0.574224386809;RXRA_VDR{dimer}:0.569452289588;PAX4:0.566587972808;NR3C1:0.558955263144;STAT2,4,6:0.541358511785;PAX2:0.537796382807;FOS_FOS{B,L1}_JUN{B,D}:0.523186523393;TFCP2:0.507413857115;HMGA1,2:0.501906412858;TEF:0.479234527636;ZBTB6:0.4770942655;FOXO1,3,4:0.468302025645;LHX3,4:0.446495046327;FOXP3:0.4445541095;EVI1:0.430075599283;CRX:0.428761628224;TBX4,5:0.427793303481;TLX1..3_NFIC{dimer}:0.388245487244;PPARG:0.380745649704;RFX1:0.346871165954;GZF1:0.34648573887;FOSL2:0.34508843111;AHR_ARNT_ARNT2:0.311066576778;GTF2A1,2:0.309872861676;TFAP4:0.305759957792;NFKB1_REL_RELA:0.294202003937;TFAP2B:0.272784863729;TBP:0.270879997883;ATF2:0.244304107996;NKX2-2,8:0.230511747141;ALX1:0.223148914995;ATF4:0.171683244498;STAT1,3:0.171031812606;GFI1B:0.16415961843;PRDM1:0.159314598113;KLF4:0.144414907977;SRF:0.108386129112;CREB1:0.106915295865;ATF5_CREB3:0.0891257396281;ARID5B:0.0876077017445;IRF1,2:0.0857193939276;GLI1..3:0.0779740406225;POU3F1..4:0.0775099425769;GTF2I:0.0762478027611;PATZ1:0.0755141258848;BPTF:0.0674120714147;ESRRA:0.0605993490201;REST:0.0485249128466;NFIL3:0.0376175786717;AR:0.0172641071918;MYFfamily:0.00197526545094;SP1:-0.0100925018676;POU1F1:-0.0135583111797;ZNF143:-0.0314548206981;NHLH1,2:-0.0362232586318;MAZ:-0.03639402393;SMAD1..7,9:-0.0540197801984;SOX17:-0.0561612136628;NR6A1:-0.0632533236153;MEF2{A,B,C,D}:-0.0738436997357;HNF1A:-0.0840166489986;ZNF148:-0.088689025021;FOX{I1,J2}:-0.0912409281225;PAX6:-0.0944453231189;ZBTB16:-0.0951574794009;RUNX1..3:-0.100072848115;HAND1,2:-0.121811286405;JUN:-0.138773844451;ZNF423:-0.140650822732;SPZ1:-0.145451322811;STAT5{A,B}:-0.146652557986;NKX3-2:-0.149610073855;ADNP_IRX_SIX_ZHX:-0.152536082954;PAX8:-0.170755711953;IRF7:-0.17817678637;FOX{D1,D2}:-0.18106853094;NRF1:-0.182433480745;LMO2:-0.182461439513;PAX5:-0.187814845164;HIC1:-0.192807879894;ONECUT1,2:-0.198187433458;FOXL1:-0.19896974674;MZF1:-0.204793312723;CDC5L:-0.211098751831;YY1:-0.212747638558;GATA4:-0.219731632264;MTF1:-0.229360631292;ZIC1..3:-0.23028940009;ELF1,2,4:-0.242624830121;ZFP161:-0.24683064494;FOXN1:-0.251259490441;GCM1,2:-0.272834306681;HNF4A_NR2F1,2:-0.298291207068;PRRX1,2:-0.303196663019;HOXA9_MEIS1:-0.308667886776;TFAP2{A,C}:-0.348524720887;POU6F1:-0.362285598664;GFI1:-0.371163713974;PBX1:-0.37250726696;MTE{core}:-0.39506021193;PAX3,7:-0.395517658128;SPI1:-0.412399690105;EGR1..3:-0.425728931016;MYOD1:-0.434071071948;SOX2:-0.435581047152;RORA:-0.45824734959;DMAP1_NCOR{1,2}_SMARC:-0.476439989434;RREB1:-0.478871730567;FOXQ1:-0.481512470794;ETS1,2:-0.482779845527;LEF1_TCF7_TCF7L1,2:-0.495224449309;XCPE1{core}:-0.505990779425;RFX2..5_RFXANK_RFXAP:-0.512514502726;SPIB:-0.536609032548;EP300:-0.56829973469;MED-1{core}:-0.591495689256;CDX1,2,4:-0.612094104178;GATA6:-0.623324011993;HOX{A6,A7,B6,B7}:-0.623994420069;HBP1_HMGB_SSRP1_UBTF:-0.655686404105;TFDP1:-0.672346892572;ZNF384:-0.69306750674;NFY{A,B,C}:-0.708402489125;ZEB1:-0.712926135023;SNAI1..3:-0.714172533151;DBP:-0.722289283992;NKX6-1,2:-0.735081445791;NR1H4:-0.753013376157;TGIF1:-0.753546065602;SOX5:-0.787902200628;MYB:-0.796491541584;FOXA2:-0.812842526042;CUX2:-0.815511552266;NR5A1,2:-0.869108686705;PDX1:-0.885824353477;RBPJ:-0.88853425784;SOX{8,9,10}:-0.894137261481;FOXD3:-0.941397427158;POU5F1:-0.98111499848;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.998295133665;FOX{F1,F2,J1}:-1.02479232932;FOXP1:-1.07647636039;FOXM1:-1.12510863483;BREu{core}:-1.13807672592;VSX1,2:-1.17143269329;TOPORS:-1.17910902526;OCT4_SOX2{dimer}:-1.19763298491;NANOG:-1.25194172945;T:-1.30536728049;E2F1..5:-1.31933769871;IKZF2:-1.32815673904;NKX2-3_NKX2-5:-1.43951752596;POU2F1..3:-1.63971248385;PITX1..3:-1.71694850992
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11752-123G6;search_select_hide=table117:FF:11752-123G6
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - cardiac, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12368
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005347
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12368 CAGE DRX008551 DRR009423
Accession ID Hg19

Library idBAMCTSS
CNhs12368 DRZ000848 DRZ002233
Accession ID Hg38

Library idBAMCTSS
CNhs12368 DRZ012198 DRZ013583
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.46
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.133
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.415
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0613
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0441
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.784
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.192
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0895
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.6
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.164
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.164
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.0895
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.227
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.195
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.48
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.647
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.375
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0895
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.764
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12368

Jaspar motifP-value
MA0002.20.835
MA0003.10.353
MA0004.10.105
MA0006.10.7
MA0007.10.758
MA0009.10.446
MA0014.10.419
MA0017.10.357
MA0018.20.0155
MA0019.10.756
MA0024.14.49164e-9
MA0025.10.264
MA0027.10.98
MA0028.10.0816
MA0029.10.4
MA0030.10.419
MA0031.10.661
MA0035.20.198
MA0038.10.0613
MA0039.20.338
MA0040.10.0786
MA0041.10.406
MA0042.10.914
MA0043.10.239
MA0046.10.0239
MA0047.20.577
MA0048.10.358
MA0050.10.712
MA0051.10.165
MA0052.10.325
MA0055.10.122
MA0057.10.844
MA0058.10.0268
MA0059.10.0734
MA0060.14.04367e-7
MA0061.10.0735
MA0062.20.834
MA0065.20.383
MA0066.10.766
MA0067.10.207
MA0068.10.51
MA0069.10.26
MA0070.10.466
MA0071.10.964
MA0072.10.934
MA0073.10.846
MA0074.10.252
MA0076.10.262
MA0077.10.234
MA0078.10.99
MA0079.20.481
MA0080.23.8705e-5
MA0081.10.199
MA0083.10.429
MA0084.10.0755
MA0087.10.615
MA0088.10.462
MA0090.10.0068
MA0091.10.203
MA0092.10.841
MA0093.10.0445
MA0099.27.56807e-14
MA0100.10.063
MA0101.10.00348
MA0102.20.351
MA0103.10.00493
MA0104.20.459
MA0105.10.257
MA0106.10.00119
MA0107.10.00155
MA0108.20.164
MA0111.10.0354
MA0112.20.0439
MA0113.10.411
MA0114.10.448
MA0115.10.157
MA0116.10.905
MA0117.10.861
MA0119.10.509
MA0122.10.964
MA0124.10.0346
MA0125.10.14
MA0131.10.476
MA0135.10.32
MA0136.16.57061e-5
MA0137.20.086
MA0138.20.652
MA0139.10.281
MA0140.10.577
MA0141.10.663
MA0142.10.067
MA0143.10.6
MA0144.10.0173
MA0145.10.612
MA0146.10.931
MA0147.10.732
MA0148.10.908
MA0149.10.604
MA0150.11.68396e-7
MA0152.10.0121
MA0153.10.976
MA0154.10.66
MA0155.10.344
MA0156.10.0346
MA0157.10.934
MA0159.10.212
MA0160.10.701
MA0162.10.0352
MA0163.10.0793
MA0164.10.319
MA0258.10.591
MA0259.10.948



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12368

Novel motifP-value
10.965
100.335
1000.988
1010.661
1020.585
1030.109
1040.753
1050.66
1060.438
1070.621
1080.174
1090.0592
110.474
1100.334
1110.673
1120.105
1138.96369e-4
1140.374
1150.619
1160.0515
1170.0373
1180.713
1190.729
120.932
1200.11
1210.624
1220.0811
1238.28523e-4
1240.0465
1250.916
1260.903
1270.817
1280.936
1290.214
130.415
1300.567
1310.133
1320.401
1330.538
1340.569
1350.541
1360.229
1370.749
1380.943
1390.141
140.446
1400.721
1410.51
1420.749
1430.213
1440.534
1450.976
1460.952
1470.273
1480.909
1490.239
150.797
1500.17
1510.832
1520.0271
1530.448
1540.302
1550.00511
1560.163
1570.943
1580.065
1590.126
160.0452
1600.296
1610.333
1620.194
1630.556
1640.00988
1650.702
1660.357
1670.383
1680.855
1690.119
170.549
180.0228
190.132
20.797
200.326
210.52
220.142
230.24
240.87
250.0579
260.703
270.881
280.841
290.0674
30.696
300.973
310.535
322.40754e-5
330.669
340.646
350.89
360.0483
370.00161
380.24
390.251
40.023
400.407
410.989
420.397
430.669
440.943
450.861
460.837
470.558
480.857
490.118
50.888
500.876
510.611
520.947
530.00918
540.959
550.216
560.658
570.723
580.12
590.427
60.357
600.565
610.677
620.13
630.553
640.886
650.97
660.201
670.319
680.614
690.321
70.141
700.747
710.522
720.685
730.00154
740.0608
750.21
760.345
770.0109
780.018
790.509
80.517
800.663
810.8
820.958
830.758
840.857
850.159
860.19
870.00288
880.626
890.176
90.689
900.933
910.491
920.156
930.799
940.504
950.011
960.468
970.164
980.125
990.695



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12368


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)

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