FF:11904-125F5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005013 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008543;DRR009415;DRZ000840;DRZ002225;DRZ012190;DRZ013575 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453,CL:0000840,CL:0001014,CL:0001016 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011135 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/immature%2520langerhans%2520cells%252c%2520donor1.CNhs13537.11904-125F5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/immature%2520langerhans%2520cells%252c%2520donor1.CNhs13537.11904-125F5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/immature%2520langerhans%2520cells%252c%2520donor1.CNhs13537.11904-125F5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/immature%2520langerhans%2520cells%252c%2520donor1.CNhs13537.11904-125F5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/immature%2520langerhans%2520cells%252c%2520donor1.CNhs13537.11904-125F5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11904-125F5 | |id=FF:11904-125F5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011135 | ||
|is_obsolete= | |||
|library_id=CNhs13537 | |||
|library_id_phase_based=2:CNhs13537 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11904 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11904 | |||
|name=immature langerhans cells, donor1 | |name=immature langerhans cells, donor1 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13537,LSID1029,release012,COMPLETED | |profile_hcage=CNhs13537,LSID1029,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.139364864616684,0,0,0,0,-0.160318030086386,0,0.340647711611887,-0.077030356335444,0,0,0,0,0,0,0,0,0,0,0.568164948169043,0,0,0.0080293519427087,0,0,0,0,0,-0.0098310637927698,0,0,-0.0448297573035746,0,0,0,0,0,0.00545413651143485,0,0,0,0.0881268324752877,0,0,0.14900776792321,0,0,0,0,0,0,0,0,0.11514984350385,0,0,0,0,0,-0.0952681159154284,0,-0.0969923612426051,0,0,-0.00921679473780924,0,0,0,0,0,0,0,0,0,0,0.913769601328936,0,0,0.511848471100164,0,0,0,0,0,0,0,0,0,0,-0.536343604221446,0,0,0,0.0296800056634625,0.072885071388653,0.080676181145568,0,0.62334858393259,0,0.229296902905311,-0.0944137845632515,0,0,0,0,0,0.61774048987867,0,0,0,0,0,0.161352362291136,0,0,0,0,0,-0.0523101776848172,0,0,0,0.113096555081989,0.152782954868291,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.229296902905311,0,0,0,0,0,0,0,0,0,0,0,0.493142580414504,0.0440634162376439,-0.474086218752008,0.53994222330074,0.0440634162376439,0,-0.142869849402429,0,0,0,0,0.568164948169043,0,0.480691642538996,0.447125633690659,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,0.0655666803953255,0.161352362291136,-0.130194644911866,0.0197825713979195,0,0,0,0,-0.0501996235720723,0,0.0404728784973957,-0.0827201683234173,0,-0.051337920812768,0.355033911701814,0,0,0,-0.131098109024157,-0.794384410712975,0,0,-0.0097826004119175,0.0240235856808388,0,0,-0.391044581551635,0,0.0467515595898389,-0.248868050382253,0,0,0,0,0.161352362291136,0,0,0,0,0,0,0,0,0.0672461305617753,-0.048258867445601,0,0,0,0,0.0474628065312088,0,0,-0.373286155956567,-0.350736013296859,0,-0.133600454188606,0,1.14471970694862,-0.075928855040652,-0.227605197139923,0.289935020089575,-0.147401849371139,-0.10185488707456,0,-0.472173218125241,-0.1028152632898,-0.00232685198600796,0.184770515737536,-0.030468313033356,-1.14328167581182,-0.13437379706802,0,0.0881268324752877,0,-0.541149284557516,0,0.2573607315973,-0.328762352185637,0.181994252983575,-0.62692402023807,-0.113320638239315,-0.507164801069585,0.140939836508111,-0.0395325284566706,-0.296084090605458,-0.102118336037645,-0.296832727520488,0.000920593820585736,0.0881268324752877,0,-0.0705508784876473,0.204159417581256,0.584155875802854,0,0.485626386104458,-0.0683442610773682,0.192673432485524,0.032849814434919,-0.426120782950319,0.0881268324752877,0,0.015024873473518,0,0,0,0,0,-0.18957617187417,-0.315497640350253,0.214270072135114,0,0.0192104761718185,-0.0321500565766144,0.344623205986021,0,0.391536306359212,0.168868149682927,0.0422986291849213,0.136265676759183,0,-0.308833707889816,0.0610720281319187,0.00151876161952624,-0.422394805391737,0.0296800056634625,0.619242965343217,0.0977567998202342,-0.0734222918430805,-0.564945362110313,-0.0859076492386153,0,-0.0488096634978291,-0.402853107979384,1.2390066095023,0,-0.583529904229572,0,0.208392558729414,0,0.335262738908709,0,-0.432840496976212,-0.379081389182104,0.952038513906233,0.557690367797166,0,-0.397464044401397,-0.788130937773974,0,-0.184257540696693,-0.0418423631493412,0.410746408482996,-0.150367083334639,-0.536343604221446,0.113233892398961,0.189156433642971,0,-0.790080158389657,0,0,-0.261333580716656,0.0432536914689791,0.161352362291136,0.077944308319569,0.254076452613763,0.354780492195466,-0.0278442409596463,0.0881268324752877,0,-0.645700337992725,0,0,0.319597430526213,-0.0883637325122281,-0.619783323958633,0.314838606682287,-0.0369669956173055,-0.0645593932166115,0,0,-0.089400933489888,0.371038911293733,-0.54781530762559,0,0.0881268324752877,0.006042938951258,0,0,0.080676181145568,0.0881268324752877,-0.114589509412196,0,0,0,0,0,0,0,-0.0544911570438098,-0.26670649774116,0,-0.0687699243258317,0,0,0,0,0,0,0,0,-0.386227119303069,-0.101537235525844,-0.12301741567642,0,0,0,0,-0.215723402553475,-0.0418841998035874,0,0.146867022735736,0,0.0440634162376439,0,0,0.00198584268607636,0,0.161352362291136,0,0,0.0303963754216237,0.051153880987449,0.0881268324752877,0,0.0440634162376439,-0.188827569126503,0,0,0,0,0.344247202928988,0,0,-0.130356354395287,0,-0.277217977936139,0.197147849686526,0,0.043642697893197,-0.254681017914784,0.442954715444591,0,0,1.24137246681225,0,0,0.363248232646003,0.0642005572492617,0,0,0,0,0.080676181145568,0,0,1.24669716786518,-0.126187679924468,0,0,0,0,0,0,0,0,0,0,0,0.308895712295146,-0.0922240566585104,-0.0640596705171081,0,0,0,0,0,0,0.056570158066665,0.050360640761631,0,0.0881268324752877,0,0,0,0,0,0,-0.144093685520225,0,0,0.567360509662787,0,0,-0.0969923612426051,0,0,0,0.278729729233368,-0.154060712670888,0,0,0.340647711611887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100675416644466,0.412194558320653,0,0,0,0,0,0,0,-0.186706465730803,0,0,0,0,1.96615073307491,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0.278729729233368,0,0,0.0881268324752877,0,0.0881268324752877,0,0,0.278729729233368,0,0,0,0,0,0,0.0440634162376439,0,0,0,-1.09906229832185,0,0,-0.226882616470521,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0.080676181145568,0,0.410746408482996,0,0,0,0,0,0,0,0,0,0,0,0.161352362291136,0,0,0.139364864616684,-0.061367927484915,0,0,0,0,0,0,0,-0.0098310637927698,0,0,0.999144262528026,0,0,0,0,0,0,0.136864744576382,-0.239156983585504,-0.147520721134597,0,0,0,-0.054385572482455,0,0,-0.135555641599187,0,0.094574974872235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0080293519427087,0,0,0,0,0,0,0.223562816845329,0,0,0,0,0,0.0440634162376439,0,0,0,0,0,0.65182878531445,0,0,0,0,0.0440634162376439,0,0,0,0,0.0881268324752877,0,0,0,0,0,0,0.270227634715481,0,0,0,0,0,0,0,0,0.0440634162376439,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.0109082730228697,0.0881268324752877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703250960873257,0,0,0,0,0,0,0,0,0,0,0,0,0.0881268324752877,0,0,0,0.0881268324752877,0,0.0881268324752877,0,0.162736081218648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113130287052082,0,0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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=1.2736 | |rna_weight_ug=1.2736 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.70913509167961e-225!GO:0043226;organelle;4.57755027700893e-185!GO:0043229;intracellular organelle;2.81793437196386e-184!GO:0043227;membrane-bound organelle;3.25865394878768e-183!GO:0043231;intracellular membrane-bound organelle;6.2001781443838e-183!GO:0005737;cytoplasm;2.1956866123763e-135!GO:0044422;organelle part;6.02212173791123e-110!GO:0044446;intracellular organelle part;1.3213019882108e-108!GO:0005634;nucleus;7.27083491593571e-103!GO:0043170;macromolecule metabolic process;2.39373422437975e-93!GO:0032991;macromolecular complex;2.54475874635721e-89!GO:0044238;primary metabolic process;2.77244643182359e-88!GO:0044237;cellular metabolic process;2.01333565347318e-86!GO:0044444;cytoplasmic part;1.01367095422602e-83!GO:0005515;protein binding;1.12437917161757e-78!GO:0030529;ribonucleoprotein complex;3.53282717114208e-71!GO:0044428;nuclear part;5.18833730109099e-68!GO:0003723;RNA binding;1.01445779191466e-67!GO:0043283;biopolymer metabolic process;1.31569838479337e-66!GO:0010467;gene expression;1.62789043730184e-59!GO:0043233;organelle lumen;2.16858230432407e-57!GO:0031974;membrane-enclosed lumen;2.16858230432407e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.56070072565681e-54!GO:0006396;RNA processing;8.53823446957159e-50!GO:0006412;translation;1.90962717170022e-46!GO:0033036;macromolecule localization;2.5392796539302e-46!GO:0043234;protein complex;6.19716609363789e-46!GO:0015031;protein transport;2.41868310442067e-45!GO:0019538;protein metabolic process;3.11363162293648e-45!GO:0016071;mRNA metabolic process;2.49501377890074e-44!GO:0045184;establishment of protein localization;2.2341390822712e-43!GO:0031981;nuclear lumen;5.26194912343813e-43!GO:0008104;protein localization;1.12357936321913e-41!GO:0016043;cellular component organization and biogenesis;1.64137336744698e-40!GO:0044267;cellular protein metabolic process;3.37688882024933e-40!GO:0008380;RNA splicing;3.8442802115547e-39!GO:0044260;cellular macromolecule metabolic process;1.08247558810604e-38!GO:0003676;nucleic acid binding;6.37756009366649e-38!GO:0006397;mRNA processing;1.54946888375024e-37!GO:0005829;cytosol;3.32422960759388e-36!GO:0031090;organelle membrane;5.14118562281294e-35!GO:0005840;ribosome;1.34349553293242e-34!GO:0046907;intracellular transport;3.82016775472821e-34!GO:0016070;RNA metabolic process;8.20825541073968e-34!GO:0005739;mitochondrion;3.56360655958845e-33!GO:0009059;macromolecule biosynthetic process;1.83214560872063e-32!GO:0006886;intracellular protein transport;5.00818284536858e-32!GO:0065003;macromolecular complex assembly;2.36676532244841e-31!GO:0003735;structural constituent of ribosome;3.57376488185076e-30!GO:0005681;spliceosome;4.34065585584507e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.82010205132745e-30!GO:0006996;organelle organization and biogenesis;3.4837345793392e-29!GO:0044249;cellular biosynthetic process;2.56039834081966e-28!GO:0043228;non-membrane-bound organelle;9.61982502628005e-28!GO:0043232;intracellular non-membrane-bound organelle;9.61982502628005e-28!GO:0033279;ribosomal subunit;1.5526839510612e-27!GO:0022607;cellular component assembly;5.38532879992682e-27!GO:0009058;biosynthetic process;5.69164901887669e-27!GO:0031967;organelle envelope;7.38807457871041e-27!GO:0005654;nucleoplasm;1.31625927306797e-26!GO:0031975;envelope;1.4904524323997e-26!GO:0006259;DNA metabolic process;2.88600069155838e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.14332287818412e-25!GO:0044429;mitochondrial part;8.43105931174729e-25!GO:0051649;establishment of cellular localization;9.64421561946358e-25!GO:0051641;cellular localization;2.90843123456398e-24!GO:0006915;apoptosis;5.54260459734876e-24!GO:0012501;programmed cell death;6.39487067637766e-24!GO:0044445;cytosolic part;1.9554094242198e-23!GO:0008219;cell death;3.25237628516021e-23!GO:0016265;death;3.25237628516021e-23!GO:0000166;nucleotide binding;7.46475490562665e-23!GO:0007049;cell cycle;2.56450059980008e-22!GO:0044451;nucleoplasm part;8.70124466462209e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.06851201177858e-21!GO:0016462;pyrophosphatase activity;4.93178267823733e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;5.00917975303042e-21!GO:0017111;nucleoside-triphosphatase activity;1.04761129521884e-20!GO:0008134;transcription factor binding;1.28160291004142e-20!GO:0050794;regulation of cellular process;8.07660666443759e-20!GO:0006512;ubiquitin cycle;1.99304293111892e-19!GO:0022618;protein-RNA complex assembly;4.88592979399871e-19!GO:0044265;cellular macromolecule catabolic process;5.9300251004195e-19!GO:0043285;biopolymer catabolic process;9.24749385439585e-19!GO:0019941;modification-dependent protein catabolic process;1.30997985961944e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.30997985961944e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.39237315741028e-18!GO:0006511;ubiquitin-dependent protein catabolic process;1.80999538423865e-18!GO:0044257;cellular protein catabolic process;2.18857183224764e-18!GO:0005730;nucleolus;3.93732318507375e-18!GO:0006119;oxidative phosphorylation;1.88305712860705e-17!GO:0043412;biopolymer modification;3.38856568035721e-17!GO:0016604;nuclear body;5.35351745148793e-17!GO:0005740;mitochondrial envelope;5.63331407036164e-17!GO:0016874;ligase activity;7.41562711120072e-17!GO:0048770;pigment granule;1.00962365021906e-16!GO:0042470;melanosome;1.00962365021906e-16!GO:0032553;ribonucleotide binding;2.48233856727785e-16!GO:0032555;purine ribonucleotide binding;2.48233856727785e-16!GO:0006605;protein targeting;3.8244096954167e-16!GO:0009057;macromolecule catabolic process;5.82858560906208e-16!GO:0031966;mitochondrial membrane;6.29376029970378e-16!GO:0006974;response to DNA damage stimulus;6.95812837427968e-16!GO:0022402;cell cycle process;1.05414984762398e-15!GO:0016607;nuclear speck;1.17661449477979e-15!GO:0030163;protein catabolic process;1.6567137597681e-15!GO:0043687;post-translational protein modification;2.14770248532354e-15!GO:0019866;organelle inner membrane;2.41316207762139e-15!GO:0008135;translation factor activity, nucleic acid binding;4.40535710476031e-15!GO:0006464;protein modification process;4.44891283824343e-15!GO:0015934;large ribosomal subunit;4.48485433375077e-15!GO:0017076;purine nucleotide binding;4.56949133507151e-15!GO:0006457;protein folding;5.63463663948407e-15!GO:0012505;endomembrane system;8.42498695662653e-15!GO:0050789;regulation of biological process;1.9170589181603e-14!GO:0006913;nucleocytoplasmic transport;2.01569360577072e-14!GO:0019222;regulation of metabolic process;2.04478701619549e-14!GO:0042981;regulation of apoptosis;2.63128792978578e-14!GO:0000502;proteasome complex (sensu Eukaryota);3.01792412635047e-14!GO:0051169;nuclear transport;3.80382807526996e-14!GO:0043067;regulation of programmed cell death;4.84834066501641e-14!GO:0005524;ATP binding;2.17443374202966e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.36765716263863e-13!GO:0015935;small ribosomal subunit;2.58053328002635e-13!GO:0044248;cellular catabolic process;2.88161381504128e-13!GO:0005743;mitochondrial inner membrane;2.97105182720616e-13!GO:0032559;adenyl ribonucleotide binding;3.10982251490981e-13!GO:0016192;vesicle-mediated transport;3.16851438199217e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;3.16851438199217e-13!GO:0000375;RNA splicing, via transesterification reactions;3.16851438199217e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.16851438199217e-13!GO:0051726;regulation of cell cycle;6.06058548167013e-13!GO:0044455;mitochondrial membrane part;6.23946816910562e-13!GO:0000074;regulation of progression through cell cycle;6.95963243529306e-13!GO:0006281;DNA repair;8.25429353125509e-13!GO:0003712;transcription cofactor activity;1.33308676749935e-12!GO:0003743;translation initiation factor activity;1.63463925606768e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.79222074261213e-12!GO:0005694;chromosome;1.93205311866746e-12!GO:0051276;chromosome organization and biogenesis;2.09090268874694e-12!GO:0006413;translational initiation;2.51042368927366e-12!GO:0016887;ATPase activity;3.00291409361792e-12!GO:0006366;transcription from RNA polymerase II promoter;4.83268979658946e-12!GO:0042254;ribosome biogenesis and assembly;4.96126386229092e-12!GO:0048523;negative regulation of cellular process;5.94335597638331e-12!GO:0042623;ATPase activity, coupled;6.8087043137242e-12!GO:0005768;endosome;6.8087043137242e-12!GO:0030554;adenyl nucleotide binding;7.0623519243768e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;1.04519945830063e-11!GO:0051246;regulation of protein metabolic process;1.36001968859781e-11!GO:0009719;response to endogenous stimulus;1.67753480016829e-11!GO:0031323;regulation of cellular metabolic process;2.18882130042938e-11!GO:0050657;nucleic acid transport;2.55267713752306e-11!GO:0051236;establishment of RNA localization;2.55267713752306e-11!GO:0050658;RNA transport;2.55267713752306e-11!GO:0006446;regulation of translational initiation;3.19001890729619e-11!GO:0008639;small protein conjugating enzyme activity;3.28756555558209e-11!GO:0006403;RNA localization;3.76102104244021e-11!GO:0006323;DNA packaging;4.37730691699957e-11!GO:0004842;ubiquitin-protein ligase activity;4.7050541385163e-11!GO:0051082;unfolded protein binding;5.3253698587105e-11!GO:0004386;helicase activity;5.93393145702464e-11!GO:0005794;Golgi apparatus;6.71927555698884e-11!GO:0006793;phosphorus metabolic process;7.23001978144128e-11!GO:0006796;phosphate metabolic process;7.23001978144128e-11!GO:0005635;nuclear envelope;1.08108837041734e-10!GO:0044453;nuclear membrane part;1.12430325301151e-10!GO:0019787;small conjugating protein ligase activity;1.20075091633875e-10!GO:0048519;negative regulation of biological process;1.78535039389586e-10!GO:0043069;negative regulation of programmed cell death;1.80749915903224e-10!GO:0065007;biological regulation;1.99155277295949e-10!GO:0043066;negative regulation of apoptosis;2.08143663296005e-10!GO:0048193;Golgi vesicle transport;2.82756329648049e-10!GO:0000278;mitotic cell cycle;3.23442263718037e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.56790564257875e-10!GO:0006350;transcription;4.78454097148384e-10!GO:0005746;mitochondrial respiratory chain;5.64193007094802e-10!GO:0017038;protein import;7.0060653333868e-10!GO:0031980;mitochondrial lumen;7.21301359194308e-10!GO:0005759;mitochondrial matrix;7.21301359194308e-10!GO:0031965;nuclear membrane;7.26703326390392e-10!GO:0010468;regulation of gene expression;7.28807655245147e-10!GO:0044427;chromosomal part;7.54014071783959e-10!GO:0050136;NADH dehydrogenase (quinone) activity;9.38677990016148e-10!GO:0003954;NADH dehydrogenase activity;9.38677990016148e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.38677990016148e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.04376101043228e-09!GO:0008565;protein transporter activity;1.09783249899079e-09!GO:0008026;ATP-dependent helicase activity;1.18416585658799e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.29320642459183e-09!GO:0005643;nuclear pore;1.65115848868094e-09!GO:0051028;mRNA transport;1.68935207339295e-09!GO:0031324;negative regulation of cellular metabolic process;2.82829401052108e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.1854687800001e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.22259632349401e-09!GO:0016564;transcription repressor activity;5.61225099720459e-09!GO:0006461;protein complex assembly;9.62508448650679e-09!GO:0005773;vacuole;1.00117331465745e-08!GO:0015986;ATP synthesis coupled proton transport;1.14093392586326e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.14093392586326e-08!GO:0019829;cation-transporting ATPase activity;1.20078624750945e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.24530330043435e-08!GO:0006916;anti-apoptosis;1.24530330043435e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.10163459134472e-08!GO:0016310;phosphorylation;2.13163625821152e-08!GO:0016881;acid-amino acid ligase activity;2.20884117033229e-08!GO:0042775;organelle ATP synthesis coupled electron transport;2.36881336344847e-08!GO:0042773;ATP synthesis coupled electron transport;2.36881336344847e-08!GO:0065004;protein-DNA complex assembly;2.51976273188717e-08!GO:0007243;protein kinase cascade;2.69620105721615e-08!GO:0006399;tRNA metabolic process;2.94088459162792e-08!GO:0051186;cofactor metabolic process;2.94088459162792e-08!GO:0006333;chromatin assembly or disassembly;3.0341505083769e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.11887774286499e-08!GO:0030964;NADH dehydrogenase complex (quinone);3.16840611734916e-08!GO:0045271;respiratory chain complex I;3.16840611734916e-08!GO:0005747;mitochondrial respiratory chain complex I;3.16840611734916e-08!GO:0044432;endoplasmic reticulum part;3.1735308834736e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.30198557376623e-08!GO:0005783;endoplasmic reticulum;3.48110510366606e-08!GO:0009259;ribonucleotide metabolic process;3.49995868671691e-08!GO:0032446;protein modification by small protein conjugation;4.58898844497811e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.81759390760908e-08!GO:0032774;RNA biosynthetic process;5.49978045163589e-08!GO:0009260;ribonucleotide biosynthetic process;5.55432825930614e-08!GO:0006351;transcription, DNA-dependent;5.65904102161149e-08!GO:0051170;nuclear import;5.91630159801334e-08!GO:0006164;purine nucleotide biosynthetic process;6.36207709668681e-08!GO:0045786;negative regulation of progression through cell cycle;6.66423390280942e-08!GO:0007242;intracellular signaling cascade;6.69605460721225e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.32098031230527e-08!GO:0000785;chromatin;7.78575102054815e-08!GO:0016567;protein ubiquitination;7.85030954564621e-08!GO:0009056;catabolic process;8.99208186709877e-08!GO:0006163;purine nucleotide metabolic process;9.11246703353751e-08!GO:0009892;negative regulation of metabolic process;9.40663308512265e-08!GO:0006606;protein import into nucleus;9.67112373381253e-08!GO:0006364;rRNA processing;9.70904832897895e-08!GO:0022403;cell cycle phase;9.99139828584103e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.01639670735565e-07!GO:0065002;intracellular protein transport across a membrane;1.01723662772705e-07!GO:0016481;negative regulation of transcription;1.23942732860863e-07!GO:0003924;GTPase activity;1.28174757084396e-07!GO:0046930;pore complex;1.32791383516151e-07!GO:0003713;transcription coactivator activity;1.35487236243617e-07!GO:0016072;rRNA metabolic process;1.39165620807357e-07!GO:0007264;small GTPase mediated signal transduction;1.54194621032995e-07!GO:0009150;purine ribonucleotide metabolic process;1.56036358719981e-07!GO:0016568;chromatin modification;1.72306672030624e-07!GO:0000323;lytic vacuole;1.74494984348538e-07!GO:0005764;lysosome;1.74494984348538e-07!GO:0006754;ATP biosynthetic process;1.76472840739921e-07!GO:0006753;nucleoside phosphate metabolic process;1.76472840739921e-07!GO:0006417;regulation of translation;1.98259152984227e-07!GO:0005770;late endosome;2.22596655178434e-07!GO:0006732;coenzyme metabolic process;2.2609215054159e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.61282121492384e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.61282121492384e-07!GO:0006260;DNA replication;2.6296659155325e-07!GO:0065009;regulation of a molecular function;3.36492243311723e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.85601209109373e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.85601209109373e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.95115645563924e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.3731091308945e-07!GO:0043566;structure-specific DNA binding;4.96432486527544e-07!GO:0003714;transcription corepressor activity;5.2762326486403e-07!GO:0045449;regulation of transcription;5.94648221486659e-07!GO:0006950;response to stress;6.54510222098548e-07!GO:0000087;M phase of mitotic cell cycle;6.59040140295962e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.59449608014588e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.62425246204306e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.71824799080861e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.83996147073535e-07!GO:0030120;vesicle coat;8.28238192415774e-07!GO:0030662;coated vesicle membrane;8.28238192415774e-07!GO:0007067;mitosis;9.10565629479599e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.08262793099885e-06!GO:0009141;nucleoside triphosphate metabolic process;1.1218451256884e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.28346889454474e-06!GO:0019899;enzyme binding;1.36460929441856e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.37978743367539e-06!GO:0046034;ATP metabolic process;1.43414062068273e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.58725790986124e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.58725790986124e-06!GO:0048475;coated membrane;1.62607746631028e-06!GO:0030117;membrane coat;1.62607746631028e-06!GO:0016787;hydrolase activity;1.97927807988513e-06!GO:0051168;nuclear export;2.10714123341924e-06!GO:0003697;single-stranded DNA binding;2.18821905202237e-06!GO:0044440;endosomal part;2.29163447111649e-06!GO:0010008;endosome membrane;2.29163447111649e-06!GO:0005789;endoplasmic reticulum membrane;2.77741016935496e-06!GO:0009055;electron carrier activity;2.82929364005106e-06!GO:0006401;RNA catabolic process;2.98046507317357e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.10941697365937e-06!GO:0006334;nucleosome assembly;3.28163829040277e-06!GO:0005813;centrosome;3.28909141893882e-06!GO:0031326;regulation of cellular biosynthetic process;3.42699827200062e-06!GO:0048522;positive regulation of cellular process;3.58278477218911e-06!GO:0051301;cell division;3.79238849400134e-06!GO:0016563;transcription activator activity;3.79238849400134e-06!GO:0005761;mitochondrial ribosome;3.94117520454614e-06!GO:0000313;organellar ribosome;3.94117520454614e-06!GO:0007005;mitochondrion organization and biogenesis;4.33620606606691e-06!GO:0005793;ER-Golgi intermediate compartment;4.52843510600559e-06!GO:0006355;regulation of transcription, DNA-dependent;4.5424898384349e-06!GO:0008270;zinc ion binding;4.83842199620952e-06!GO:0003724;RNA helicase activity;5.47299669629473e-06!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;5.74332943117941e-06!GO:0006402;mRNA catabolic process;6.05649229866245e-06!GO:0000245;spliceosome assembly;6.53261584643252e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.97841274390293e-06!GO:0000279;M phase;7.56897591153853e-06!GO:0048468;cell development;8.05056757481265e-06!GO:0051188;cofactor biosynthetic process;8.65318358003302e-06!GO:0042613;MHC class II protein complex;9.75237336410422e-06!GO:0031497;chromatin assembly;1.00136399388059e-05!GO:0009889;regulation of biosynthetic process;1.04172999155398e-05!GO:0006752;group transfer coenzyme metabolic process;1.16340114214593e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.20854546391561e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.20854546391561e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.20854546391561e-05!GO:0009967;positive regulation of signal transduction;1.41098422447199e-05!GO:0009108;coenzyme biosynthetic process;1.56748523234272e-05!GO:0003677;DNA binding;1.60556244318967e-05!GO:0005525;GTP binding;1.62221616705298e-05!GO:0043038;amino acid activation;1.8125127274132e-05!GO:0006418;tRNA aminoacylation for protein translation;1.8125127274132e-05!GO:0043039;tRNA aminoacylation;1.8125127274132e-05!GO:0006613;cotranslational protein targeting to membrane;2.00681121435635e-05!GO:0004298;threonine endopeptidase activity;2.07652790379467e-05!GO:0031252;leading edge;2.42932023873744e-05!GO:0031982;vesicle;2.5474728346713e-05!GO:0005815;microtubule organizing center;2.56299934230572e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.06310158856079e-05!GO:0051789;response to protein stimulus;3.32247076347884e-05!GO:0006986;response to unfolded protein;3.32247076347884e-05!GO:0045259;proton-transporting ATP synthase complex;3.35123183850125e-05!GO:0045892;negative regulation of transcription, DNA-dependent;3.52949825967215e-05!GO:0015630;microtubule cytoskeleton;3.61753583448826e-05!GO:0003729;mRNA binding;3.69658243467456e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.96966139363826e-05!GO:0030695;GTPase regulator activity;4.30127395322259e-05!GO:0050790;regulation of catalytic activity;4.63087862652997e-05!GO:0009060;aerobic respiration;4.63087862652997e-05!GO:0043065;positive regulation of apoptosis;4.64129298513501e-05!GO:0008186;RNA-dependent ATPase activity;5.93199387222389e-05!GO:0043068;positive regulation of programmed cell death;5.9397831123398e-05!GO:0031988;membrane-bound vesicle;7.0301839063647e-05!GO:0005769;early endosome;7.14761977972571e-05!GO:0048518;positive regulation of biological process;7.79539295834412e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;8.72809871272113e-05!GO:0015399;primary active transmembrane transporter activity;8.72809871272113e-05!GO:0016197;endosome transport;8.97884437459533e-05!GO:0051427;hormone receptor binding;9.48958523204801e-05!GO:0031410;cytoplasmic vesicle;0.000101433385470232!GO:0008047;enzyme activator activity;0.000101542056681949!GO:0044431;Golgi apparatus part;0.00010370420734097!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000111620328323465!GO:0007050;cell cycle arrest;0.000117005718825743!GO:0048471;perinuclear region of cytoplasm;0.000119118241881177!GO:0005083;small GTPase regulator activity;0.000124422523140328!GO:0005798;Golgi-associated vesicle;0.000125014752950599!GO:0000151;ubiquitin ligase complex;0.000128872129135026!GO:0005774;vacuolar membrane;0.000132645108555711!GO:0016044;membrane organization and biogenesis;0.000138133059084844!GO:0009966;regulation of signal transduction;0.000147304429666669!GO:0016023;cytoplasmic membrane-bound vesicle;0.000168421881498259!GO:0004004;ATP-dependent RNA helicase activity;0.00017484208941211!GO:0008234;cysteine-type peptidase activity;0.000176633490474114!GO:0035257;nuclear hormone receptor binding;0.000176633490474114!GO:0051329;interphase of mitotic cell cycle;0.000177637474010886!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000182309539306634!GO:0007265;Ras protein signal transduction;0.000210222148085255!GO:0019882;antigen processing and presentation;0.000217091488218776!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00023290844351025!GO:0045333;cellular respiration;0.000258875801755002!GO:0042802;identical protein binding;0.000281150943658745!GO:0008632;apoptotic program;0.000283814141094112!GO:0032561;guanyl ribonucleotide binding;0.000283814141094112!GO:0019001;guanyl nucleotide binding;0.000283814141094112!GO:0005885;Arp2/3 protein complex;0.000288191204371304!GO:0006612;protein targeting to membrane;0.000311966531238904!GO:0008654;phospholipid biosynthetic process;0.000319812714648559!GO:0043021;ribonucleoprotein binding;0.000323259428956542!GO:0030036;actin cytoskeleton organization and biogenesis;0.000335810450070657!GO:0031072;heat shock protein binding;0.000363697029259395!GO:0016363;nuclear matrix;0.000390732761557185!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000414142406143022!GO:0042611;MHC protein complex;0.000433473061414258!GO:0006917;induction of apoptosis;0.000473676149867383!GO:0044437;vacuolar part;0.000486220767423918!GO:0001726;ruffle;0.000518743394806857!GO:0031902;late endosome membrane;0.000528291915112051!GO:0005765;lysosomal membrane;0.000528324412334257!GO:0003690;double-stranded DNA binding;0.000532625846907045!GO:0051325;interphase;0.000541266276469966!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000557637836415017!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000558529924041106!GO:0012502;induction of programmed cell death;0.000602519288923489!GO:0051338;regulation of transferase activity;0.000615101085970169!GO:0006261;DNA-dependent DNA replication;0.000617788206029315!GO:0005667;transcription factor complex;0.000726092230283903!GO:0006099;tricarboxylic acid cycle;0.000757191478106459!GO:0046356;acetyl-CoA catabolic process;0.000757191478106459!GO:0043623;cellular protein complex assembly;0.000920138321704454!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00100550365930611!GO:0046914;transition metal ion binding;0.00101605634913961!GO:0006405;RNA export from nucleus;0.00103461113779086!GO:0016779;nucleotidyltransferase activity;0.00110632850681343!GO:0030658;transport vesicle membrane;0.00120495480239958!GO:0043549;regulation of kinase activity;0.00123283067711601!GO:0032395;MHC class II receptor activity;0.00124707260581483!GO:0004674;protein serine/threonine kinase activity;0.0012642730584566!GO:0008033;tRNA processing;0.00128205835353675!GO:0016251;general RNA polymerase II transcription factor activity;0.0012871985562589!GO:0000786;nucleosome;0.00139600175873928!GO:0004860;protein kinase inhibitor activity;0.00147448141648558!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00147843650186405!GO:0006414;translational elongation;0.00153367824917893!GO:0030029;actin filament-based process;0.00158595291999945!GO:0043492;ATPase activity, coupled to movement of substances;0.00171577116275365!GO:0006084;acetyl-CoA metabolic process;0.00178541206761925!GO:0045859;regulation of protein kinase activity;0.00190404927208459!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00204068594514323!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00204577070661628!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00216240933889179!GO:0044452;nucleolar part;0.00220082676109345!GO:0019783;small conjugating protein-specific protease activity;0.00221375996977314!GO:0016740;transferase activity;0.00222736953853845!GO:0045454;cell redox homeostasis;0.00224342334297335!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00230076755232995!GO:0046966;thyroid hormone receptor binding;0.00230076755232995!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00238563642013738!GO:0008637;apoptotic mitochondrial changes;0.00248587031157755!GO:0030384;phosphoinositide metabolic process;0.002527113244879!GO:0008287;protein serine/threonine phosphatase complex;0.00253743241225475!GO:0007006;mitochondrial membrane organization and biogenesis;0.00255697393106392!GO:0005048;signal sequence binding;0.00265841377300994!GO:0006302;double-strand break repair;0.00274617253327953!GO:0048500;signal recognition particle;0.00275406370198789!GO:0009117;nucleotide metabolic process;0.00277823011871811!GO:0015992;proton transport;0.00282668885011606!GO:0004843;ubiquitin-specific protease activity;0.00286088820237229!GO:0006310;DNA recombination;0.00293800479243693!GO:0030176;integral to endoplasmic reticulum membrane;0.00293800479243693!GO:0022890;inorganic cation transmembrane transporter activity;0.00296265886698318!GO:0006818;hydrogen transport;0.00307053055504116!GO:0000139;Golgi membrane;0.00314763073328247!GO:0006672;ceramide metabolic process;0.0032267296037731!GO:0003899;DNA-directed RNA polymerase activity;0.00326830209891933!GO:0005096;GTPase activator activity;0.00330824001910955!GO:0051348;negative regulation of transferase activity;0.00332157544054403!GO:0016311;dephosphorylation;0.00332775191389782!GO:0015631;tubulin binding;0.00336840754195938!GO:0033673;negative regulation of kinase activity;0.00350289219067827!GO:0006469;negative regulation of protein kinase activity;0.00350289219067827!GO:0009109;coenzyme catabolic process;0.00359799698196669!GO:0051187;cofactor catabolic process;0.00360449238040128!GO:0000075;cell cycle checkpoint;0.00362919684756693!GO:0005819;spindle;0.00365346509068595!GO:0030118;clathrin coat;0.00371206106683582!GO:0009615;response to virus;0.00375114182784124!GO:0030660;Golgi-associated vesicle membrane;0.00378293967748211!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00381131563348326!GO:0019210;kinase inhibitor activity;0.00392295101579657!GO:0009893;positive regulation of metabolic process;0.00403780627094011!GO:0006626;protein targeting to mitochondrion;0.00406506977671138!GO:0000209;protein polyubiquitination;0.0040852925626096!GO:0051052;regulation of DNA metabolic process;0.00409968870056308!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00409968870056308!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00409968870056308!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00409968870056308!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00410350538155515!GO:0005637;nuclear inner membrane;0.0041124738205145!GO:0030521;androgen receptor signaling pathway;0.00416252602784302!GO:0004221;ubiquitin thiolesterase activity;0.00416355258060058!GO:0045941;positive regulation of transcription;0.00434395162808686!GO:0046519;sphingoid metabolic process;0.00434395162808686!GO:0006352;transcription initiation;0.00435356288647643!GO:0030127;COPII vesicle coat;0.00447538467563023!GO:0012507;ER to Golgi transport vesicle membrane;0.00447538467563023!GO:0051252;regulation of RNA metabolic process;0.00449849203912988!GO:0009165;nucleotide biosynthetic process;0.00459810420846831!GO:0046983;protein dimerization activity;0.00464730251713097!GO:0046822;regulation of nucleocytoplasmic transport;0.0052182816151647!GO:0006607;NLS-bearing substrate import into nucleus;0.005220402653428!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00528248847672008!GO:0045047;protein targeting to ER;0.00528248847672008!GO:0006891;intra-Golgi vesicle-mediated transport;0.00529379293481852!GO:0005657;replication fork;0.00535788901012205!GO:0030518;steroid hormone receptor signaling pathway;0.00535788901012205!GO:0006611;protein export from nucleus;0.00563497055824176!GO:0007034;vacuolar transport;0.0057277634897337!GO:0030659;cytoplasmic vesicle membrane;0.00581687603116345!GO:0030134;ER to Golgi transport vesicle;0.00589547784066465!GO:0008320;protein transmembrane transporter activity;0.00589669042956634!GO:0008139;nuclear localization sequence binding;0.00589669042956634!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00658220232799333!GO:0045893;positive regulation of transcription, DNA-dependent;0.00660184543734686!GO:0012506;vesicle membrane;0.00661531946042687!GO:0000776;kinetochore;0.00665842058460757!GO:0008312;7S RNA binding;0.00713458340043436!GO:0043681;protein import into mitochondrion;0.00713458340043436!GO:0051059;NF-kappaB binding;0.0072257699381873!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0075204049616756!GO:0005684;U2-dependent spliceosome;0.00775203771919416!GO:0043022;ribosome binding;0.00815519171791197!GO:0007040;lysosome organization and biogenesis;0.00815519171791197!GO:0006650;glycerophospholipid metabolic process;0.00828766058171641!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.00838661199785494!GO:0002819;regulation of adaptive immune response;0.00838661199785494!GO:0030433;ER-associated protein catabolic process;0.00838662323832024!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00838662323832024!GO:0043488;regulation of mRNA stability;0.00838662323832024!GO:0043487;regulation of RNA stability;0.00838662323832024!GO:0032940;secretion by cell;0.00866828909603965!GO:0048487;beta-tubulin binding;0.00866828909603965!GO:0046489;phosphoinositide biosynthetic process;0.00868282521859147!GO:0051087;chaperone binding;0.00880511139836034!GO:0016584;nucleosome positioning;0.00893694905660977!GO:0003711;transcription elongation regulator activity;0.0090544259223302!GO:0006839;mitochondrial transport;0.00914534495943506!GO:0051101;regulation of DNA binding;0.00922055292872382!GO:0001836;release of cytochrome c from mitochondria;0.00969257832733078!GO:0051056;regulation of small GTPase mediated signal transduction;0.00975605554915376!GO:0030258;lipid modification;0.0099051585665038!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00996482821323534!GO:0000082;G1/S transition of mitotic cell cycle;0.0100547566284408!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0106981340657105!GO:0017091;AU-rich element binding;0.0109858447053829!GO:0050779;RNA destabilization;0.0109858447053829!GO:0000289;poly(A) tail shortening;0.0109858447053829!GO:0007010;cytoskeleton organization and biogenesis;0.0109961174236354!GO:0003702;RNA polymerase II transcription factor activity;0.0112745170108718!GO:0030663;COPI coated vesicle membrane;0.0113838175011212!GO:0030126;COPI vesicle coat;0.0113838175011212!GO:0003682;chromatin binding;0.0115057382836683!GO:0005788;endoplasmic reticulum lumen;0.0116366885324346!GO:0006376;mRNA splice site selection;0.0117996993707574!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0117996993707574!GO:0006354;RNA elongation;0.0118677420062766!GO:0003725;double-stranded RNA binding;0.0118677420062766!GO:0016859;cis-trans isomerase activity;0.0119700777092131!GO:0031625;ubiquitin protein ligase binding;0.0122670550047981!GO:0046474;glycerophospholipid biosynthetic process;0.0125085819502925!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0126737658875753!GO:0045045;secretory pathway;0.0130666822454489!GO:0030119;AP-type membrane coat adaptor complex;0.0133244812248662!GO:0019377;glycolipid catabolic process;0.0133251625480621!GO:0044433;cytoplasmic vesicle part;0.0133251625480621!GO:0008017;microtubule binding;0.0134080027655027!GO:0007033;vacuole organization and biogenesis;0.0138773325387669!GO:0005099;Ras GTPase activator activity;0.013888932120948!GO:0030149;sphingolipid catabolic process;0.0139106437553119!GO:0005149;interleukin-1 receptor binding;0.0140683987687566!GO:0006470;protein amino acid dephosphorylation;0.0145053158399134!GO:0006984;ER-nuclear signaling pathway;0.0148333678484066!GO:0016272;prefoldin complex;0.0148505076135353!GO:0006383;transcription from RNA polymerase III promoter;0.0154948465583574!GO:0051336;regulation of hydrolase activity;0.0154948465583574!GO:0018193;peptidyl-amino acid modification;0.0156836915340623!GO:0022406;membrane docking;0.0157638846087099!GO:0048278;vesicle docking;0.0157638846087099!GO:0005669;transcription factor TFIID complex;0.0159650272680673!GO:0046467;membrane lipid biosynthetic process;0.0165322663152809!GO:0051223;regulation of protein transport;0.0165722694392418!GO:0007052;mitotic spindle organization and biogenesis;0.016615966095774!GO:0005741;mitochondrial outer membrane;0.0166431133805287!GO:0043130;ubiquitin binding;0.0168892855461578!GO:0032182;small conjugating protein binding;0.0168892855461578!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0169222257232267!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0169222257232267!GO:0030867;rough endoplasmic reticulum membrane;0.0171152628196985!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0171266840866802!GO:0007041;lysosomal transport;0.0174911448301173!GO:0002864;regulation of acute inflammatory response to antigenic stimulus;0.0174981326362008!GO:0002673;regulation of acute inflammatory response;0.0174981326362008!GO:0002883;regulation of hypersensitivity;0.0174981326362008!GO:0002861;regulation of inflammatory response to antigenic stimulus;0.0174981326362008!GO:0005869;dynactin complex;0.0175047726189534!GO:0004576;oligosaccharyl transferase activity;0.0176421491779251!GO:0051098;regulation of binding;0.0181981974689438!GO:0030133;transport vesicle;0.0183028851105893!GO:0008601;protein phosphatase type 2A regulator activity;0.0183420618658812!GO:0022415;viral reproductive process;0.0184722011359477!GO:0008022;protein C-terminus binding;0.0184722011359477!GO:0031901;early endosome membrane;0.0185950027213362!GO:0003678;DNA helicase activity;0.018805401159291!GO:0030131;clathrin adaptor complex;0.019711192588577!GO:0005762;mitochondrial large ribosomal subunit;0.0198330666800928!GO:0000315;organellar large ribosomal subunit;0.0198330666800928!GO:0022884;macromolecule transmembrane transporter activity;0.0198330666800928!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0198330666800928!GO:0008092;cytoskeletal protein binding;0.0199115329807694!GO:0008094;DNA-dependent ATPase activity;0.0199115329807694!GO:0006897;endocytosis;0.0204958955307495!GO:0010324;membrane invagination;0.0204958955307495!GO:0019904;protein domain specific binding;0.0204958955307495!GO:0030041;actin filament polymerization;0.0206751953639199!GO:0006643;membrane lipid metabolic process;0.0207188998385131!GO:0006904;vesicle docking during exocytosis;0.0209130990088416!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0210664369604705!GO:0046578;regulation of Ras protein signal transduction;0.0216309156920629!GO:0004527;exonuclease activity;0.0216639673016008!GO:0031325;positive regulation of cellular metabolic process;0.0218221426135761!GO:0030880;RNA polymerase complex;0.0221926960099659!GO:0004721;phosphoprotein phosphatase activity;0.0226519776544339!GO:0030125;clathrin vesicle coat;0.0230891137417411!GO:0030665;clathrin coated vesicle membrane;0.0230891137417411!GO:0019867;outer membrane;0.0232778113334518!GO:0051235;maintenance of localization;0.023332412384509!GO:0001562;response to protozoan;0.0236571913693963!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0240459736152932!GO:0031968;organelle outer membrane;0.0241646030603097!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0245766353530553!GO:0051090;regulation of transcription factor activity;0.0246762340945197!GO:0046466;membrane lipid catabolic process;0.024902937021726!GO:0033116;ER-Golgi intermediate compartment membrane;0.0249889160608705!GO:0045603;positive regulation of endothelial cell differentiation;0.0250914615969427!GO:0016791;phosphoric monoester hydrolase activity;0.0250914615969427!GO:0030139;endocytic vesicle;0.0254694238295027!GO:0016790;thiolester hydrolase activity;0.0256680293225221!GO:0001891;phagocytic cup;0.0261542367014145!GO:0008250;oligosaccharyl transferase complex;0.0261542367014145!GO:0060090;molecular adaptor activity;0.0264707875198422!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0266811172212544!GO:0016853;isomerase activity;0.0274290642082448!GO:0000159;protein phosphatase type 2A complex;0.0276736141403113!GO:0003684;damaged DNA binding;0.0280430208472517!GO:0007051;spindle organization and biogenesis;0.0283528384395191!GO:0007266;Rho protein signal transduction;0.0288301568909248!GO:0006289;nucleotide-excision repair;0.0288726960789082!GO:0016301;kinase activity;0.0291830010383952!GO:0035258;steroid hormone receptor binding;0.0292112398326998!GO:0030137;COPI-coated vesicle;0.029250053509315!GO:0018196;peptidyl-asparagine modification;0.0296271855503766!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0296271855503766!GO:0007088;regulation of mitosis;0.0312636396688477!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0314515189668709!GO:0000428;DNA-directed RNA polymerase complex;0.0314515189668709!GO:0030503;regulation of cell redox homeostasis;0.0321318984368064!GO:0043087;regulation of GTPase activity;0.0325288645754928!GO:0032508;DNA duplex unwinding;0.0326318215935792!GO:0032392;DNA geometric change;0.0326318215935792!GO:0006406;mRNA export from nucleus;0.0327962956926872!GO:0005484;SNAP receptor activity;0.0331422562780997!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0334680996041563!GO:0002821;positive regulation of adaptive immune response;0.0334680996041563!GO:0006661;phosphatidylinositol biosynthetic process;0.0334684360953198!GO:0000049;tRNA binding;0.0343831003536015!GO:0032507;maintenance of cellular protein localization;0.0343920701790889!GO:0002697;regulation of immune effector process;0.0347003678793231!GO:0046426;negative regulation of JAK-STAT cascade;0.0347584983074755!GO:0008538;proteasome activator activity;0.0350478127601682!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0359156469311589!GO:0004197;cysteine-type endopeptidase activity;0.0360117302617977!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0362880067514712!GO:0050811;GABA receptor binding;0.036889875354152!GO:0019220;regulation of phosphate metabolic process;0.0371518045212965!GO:0051174;regulation of phosphorus metabolic process;0.0371518045212965!GO:0045936;negative regulation of phosphate metabolic process;0.0377669822237791!GO:0030968;unfolded protein response;0.0378789782308665!GO:0033157;regulation of intracellular protein transport;0.0396429381846175!GO:0042306;regulation of protein import into nucleus;0.0396429381846175!GO:0006516;glycoprotein catabolic process;0.0401278384317576!GO:0032200;telomere organization and biogenesis;0.0401278384317576!GO:0000723;telomere maintenance;0.0401278384317576!GO:0051092;activation of NF-kappaB transcription factor;0.0407146617208394!GO:0003746;translation elongation factor activity;0.0408296816349831!GO:0000059;protein import into nucleus, docking;0.0409999187980457!GO:0016601;Rac protein signal transduction;0.0414617526701917!GO:0005832;chaperonin-containing T-complex;0.0418326493634559!GO:0015923;mannosidase activity;0.0418326493634559!GO:0000339;RNA cap binding;0.043124503878954!GO:0006338;chromatin remodeling;0.043124503878954!GO:0045746;negative regulation of Notch signaling pathway;0.0431963573089336!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0431963573089336!GO:0042770;DNA damage response, signal transduction;0.0431963573089336!GO:0046479;glycosphingolipid catabolic process;0.0436594375870593!GO:0006275;regulation of DNA replication;0.0438912532520432!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0442871827489453!GO:0051920;peroxiredoxin activity;0.0447970655065062!GO:0030674;protein binding, bridging;0.0459372146679331!GO:0005085;guanyl-nucleotide exchange factor activity;0.0470997105579341!GO:0030522;intracellular receptor-mediated signaling pathway;0.0473609812224887!GO:0045185;maintenance of protein localization;0.0473822152699879!GO:0019843;rRNA binding;0.0482031174282967!GO:0002720;positive regulation of cytokine production during immune response;0.0485204117148007!GO:0002702;positive regulation of production of molecular mediator of immune response;0.0485204117148007!GO:0031529;ruffle organization and biogenesis;0.0494494303585437!GO:0007004;telomere maintenance via telomerase;0.0496928909148801 | |||
|sample_id=11904 | |sample_id=11904 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex= | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=NFKB1_REL_RELA:2.6578241477;CREB1:2.54825868468;ATF5_CREB3:2.50487662999;HSF1,2:2.32388151032;FOXN1:2.29992511255;JUN:2.09523632546;ATF4:2.09466218661;NANOG{mouse}:2.01863221224;TLX2:1.98585492075;SPI1:1.62589858563;PAX2:1.56050380238;FOXP3:1.54094506879;FOSL2:1.48397540523;SPIB:1.48350992749;RUNX1..3:1.42662025206;DMAP1_NCOR{1,2}_SMARC:1.28984636052;TGIF1:1.28149331303;ATF2:1.26196255894;RFX2..5_RFXANK_RFXAP:1.17325116111;HIF1A:1.17160565276;GLI1..3:1.05569693326;FOS_FOS{B,L1}_JUN{B,D}:1.05114850891;HMX1:1.03568823659;NFE2L1:0.957370172476;BACH2:0.953163738115;VSX1,2:0.928800602254;TBX4,5:0.907907566217;ETS1,2:0.906882294936;POU5F1:0.881820314628;SREBF1,2:0.880819468848;NKX2-2,8:0.830751384138;FOX{F1,F2,J1}:0.786914184457;MAFB:0.754257232517;ATF6:0.721772835661;ELF1,2,4:0.693047578288;NFIL3:0.679423133682;STAT1,3:0.677248041132;TBP:0.66335070091;FOXQ1:0.601783191253;ESRRA:0.583431032283;ZEB1:0.557789534686;CDX1,2,4:0.542741970724;IRF1,2:0.526105547827;EP300:0.525080993656;AHR_ARNT_ARNT2:0.503909137782;NFATC1..3:0.500457674684;BPTF:0.496973451642;NFE2:0.479796635506;EGR1..3:0.420997619836;NKX6-1,2:0.419128439715;FOX{D1,D2}:0.412752530643;PAX6:0.410468000128;POU1F1:0.368130530132;MYB:0.367421847657;EN1,2:0.330742930556;HOXA9_MEIS1:0.292465023893;ZBTB16:0.284826477479;NFE2L2:0.28188244534;SNAI1..3:0.26620807142;NANOG:0.252809582937;POU2F1..3:0.241067549419;PAX3,7:0.234714057725;CUX2:0.193024024472;NKX3-1:0.176231802048;STAT5{A,B}:0.157839394287;IRF7:0.15541171206;FOXA2:0.0925103932118;CEBPA,B_DDIT3:0.0922297293742;SOX2:0.0863550623262;RORA:0.083388973047;POU3F1..4:0.0736517033435;MED-1{core}:0.0623145230109;ALX1:0.043908559981;E2F1..5:0.0411399443718;HBP1_HMGB_SSRP1_UBTF:0.0225513458728;PAX8:0.000990719537141;SOX17:-0.0349581655987;PPARG:-0.0711938354221;SMAD1..7,9:-0.0771757788933;TFDP1:-0.091122322026;STAT2,4,6:-0.0952160930266;AIRE:-0.102403626266;ZBTB6:-0.130116919932;HES1:-0.143850916482;SPZ1:-0.212588079711;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.214230617139;MYFfamily:-0.217914528193;TFAP2{A,C}:-0.238366694187;FOXP1:-0.25351030248;MYOD1:-0.268625670175;MEF2{A,B,C,D}:-0.273242536004;ALX4:-0.274275517669;ZFP161:-0.282367743042;NKX2-1,4:-0.289785915455;NKX3-2:-0.29338688297;HNF4A_NR2F1,2:-0.303007332871;OCT4_SOX2{dimer}:-0.320211067503;ELK1,4_GABP{A,B1}:-0.339850602097;HOX{A5,B5}:-0.340119907573;RFX1:-0.350401118323;NFY{A,B,C}:-0.354514297578;XBP1:-0.36973807903;SRF:-0.387427002247;TP53:-0.388767712538;PAX1,9:-0.398051062461;GCM1,2:-0.400043312334;CDC5L:-0.404183861838;PAX4:-0.406724137985;BREu{core}:-0.408354460699;IKZF2:-0.414236476569;SP1:-0.433335090376;NFIX:-0.439150915752;LMO2:-0.474562838532;HLF:-0.49602763214;CRX:-0.496040386498;HNF1A:-0.506588154445;MZF1:-0.518371126688;HMGA1,2:-0.520086374859;MAZ:-0.540361012513;GATA6:-0.545040155276;LHX3,4:-0.553616358641;HAND1,2:-0.556294293729;PAX5:-0.5664352791;ZIC1..3:-0.592773197822;TAL1_TCF{3,4,12}:-0.610838869047;NKX2-3_NKX2-5:-0.62829215833;PITX1..3:-0.645536679012;MYBL2:-0.668574336263;NR3C1:-0.680800763547;ESR1:-0.724096383956;GFI1:-0.727612577823;ZNF148:-0.745758638031;NHLH1,2:-0.756798564864;RXRA_VDR{dimer}:-0.777936977711;EVI1:-0.780324085172;PRRX1,2:-0.782259809346;TFCP2:-0.827193523834;MTE{core}:-0.834971558643;SOX5:-0.838787305812;YY1:-0.862232991649;FOXO1,3,4:-0.865770917329;NR5A1,2:-0.902804382597;GTF2A1,2:-0.925340665651;TEAD1:-0.944622860919;SOX{8,9,10}:-0.951682054418;NR6A1:-0.953451477404;HIC1:-1.01762574642;AR:-1.02806621292;GFI1B:-1.08497279946;ONECUT1,2:-1.12095505684;NRF1:-1.12558879501;IKZF1:-1.13115719786;ZNF143:-1.13403556135;ARID5B:-1.13898846103;REST:-1.15312498726;POU6F1:-1.15372129536;GTF2I:-1.18846606837;TOPORS:-1.19300085696;FOXM1:-1.20902400059;PRDM1:-1.21187836784;HOX{A4,D4}:-1.2275389645;UFEwm:-1.2282311081;TLX1..3_NFIC{dimer}:-1.24284526586;FOX{I1,J2}:-1.24883473574;XCPE1{core}:-1.27371797816;EBF1:-1.27380113266;TFAP2B:-1.28251956042;MTF1:-1.28801698167;KLF4:-1.30081638555;ADNP_IRX_SIX_ZHX:-1.33019038329;FOXL1:-1.34117657551;PATZ1:-1.34589801124;TEF:-1.3730466976;GATA4:-1.39096656892;bHLH_family:-1.39663884457;RBPJ:-1.41009820565;RREB1:-1.44938251406;HOX{A6,A7,B6,B7}:-1.47782745819;ZNF384:-1.47897006037;NR1H4:-1.48868316554;FOXD3:-1.50263761374;LEF1_TCF7_TCF7L1,2:-1.52212644074;ZNF238:-1.56073258436;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.5630918707;GZF1:-1.68254241863;T:-1.74370365162;TFAP4:-1.77009894657;PBX1:-1.82039993493;PDX1:-1.89239819597;DBP:-1.98100329815;ZNF423:-2.22959281669;RXR{A,B,G}:-2.82674107891 | |top_motifs=NFKB1_REL_RELA:2.6578241477;CREB1:2.54825868468;ATF5_CREB3:2.50487662999;HSF1,2:2.32388151032;FOXN1:2.29992511255;JUN:2.09523632546;ATF4:2.09466218661;NANOG{mouse}:2.01863221224;TLX2:1.98585492075;SPI1:1.62589858563;PAX2:1.56050380238;FOXP3:1.54094506879;FOSL2:1.48397540523;SPIB:1.48350992749;RUNX1..3:1.42662025206;DMAP1_NCOR{1,2}_SMARC:1.28984636052;TGIF1:1.28149331303;ATF2:1.26196255894;RFX2..5_RFXANK_RFXAP:1.17325116111;HIF1A:1.17160565276;GLI1..3:1.05569693326;FOS_FOS{B,L1}_JUN{B,D}:1.05114850891;HMX1:1.03568823659;NFE2L1:0.957370172476;BACH2:0.953163738115;VSX1,2:0.928800602254;TBX4,5:0.907907566217;ETS1,2:0.906882294936;POU5F1:0.881820314628;SREBF1,2:0.880819468848;NKX2-2,8:0.830751384138;FOX{F1,F2,J1}:0.786914184457;MAFB:0.754257232517;ATF6:0.721772835661;ELF1,2,4:0.693047578288;NFIL3:0.679423133682;STAT1,3:0.677248041132;TBP:0.66335070091;FOXQ1:0.601783191253;ESRRA:0.583431032283;ZEB1:0.557789534686;CDX1,2,4:0.542741970724;IRF1,2:0.526105547827;EP300:0.525080993656;AHR_ARNT_ARNT2:0.503909137782;NFATC1..3:0.500457674684;BPTF:0.496973451642;NFE2:0.479796635506;EGR1..3:0.420997619836;NKX6-1,2:0.419128439715;FOX{D1,D2}:0.412752530643;PAX6:0.410468000128;POU1F1:0.368130530132;MYB:0.367421847657;EN1,2:0.330742930556;HOXA9_MEIS1:0.292465023893;ZBTB16:0.284826477479;NFE2L2:0.28188244534;SNAI1..3:0.26620807142;NANOG:0.252809582937;POU2F1..3:0.241067549419;PAX3,7:0.234714057725;CUX2:0.193024024472;NKX3-1:0.176231802048;STAT5{A,B}:0.157839394287;IRF7:0.15541171206;FOXA2:0.0925103932118;CEBPA,B_DDIT3:0.0922297293742;SOX2:0.0863550623262;RORA:0.083388973047;POU3F1..4:0.0736517033435;MED-1{core}:0.0623145230109;ALX1:0.043908559981;E2F1..5:0.0411399443718;HBP1_HMGB_SSRP1_UBTF:0.0225513458728;PAX8:0.000990719537141;SOX17:-0.0349581655987;PPARG:-0.0711938354221;SMAD1..7,9:-0.0771757788933;TFDP1:-0.091122322026;STAT2,4,6:-0.0952160930266;AIRE:-0.102403626266;ZBTB6:-0.130116919932;HES1:-0.143850916482;SPZ1:-0.212588079711;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.214230617139;MYFfamily:-0.217914528193;TFAP2{A,C}:-0.238366694187;FOXP1:-0.25351030248;MYOD1:-0.268625670175;MEF2{A,B,C,D}:-0.273242536004;ALX4:-0.274275517669;ZFP161:-0.282367743042;NKX2-1,4:-0.289785915455;NKX3-2:-0.29338688297;HNF4A_NR2F1,2:-0.303007332871;OCT4_SOX2{dimer}:-0.320211067503;ELK1,4_GABP{A,B1}:-0.339850602097;HOX{A5,B5}:-0.340119907573;RFX1:-0.350401118323;NFY{A,B,C}:-0.354514297578;XBP1:-0.36973807903;SRF:-0.387427002247;TP53:-0.388767712538;PAX1,9:-0.398051062461;GCM1,2:-0.400043312334;CDC5L:-0.404183861838;PAX4:-0.406724137985;BREu{core}:-0.408354460699;IKZF2:-0.414236476569;SP1:-0.433335090376;NFIX:-0.439150915752;LMO2:-0.474562838532;HLF:-0.49602763214;CRX:-0.496040386498;HNF1A:-0.506588154445;MZF1:-0.518371126688;HMGA1,2:-0.520086374859;MAZ:-0.540361012513;GATA6:-0.545040155276;LHX3,4:-0.553616358641;HAND1,2:-0.556294293729;PAX5:-0.5664352791;ZIC1..3:-0.592773197822;TAL1_TCF{3,4,12}:-0.610838869047;NKX2-3_NKX2-5:-0.62829215833;PITX1..3:-0.645536679012;MYBL2:-0.668574336263;NR3C1:-0.680800763547;ESR1:-0.724096383956;GFI1:-0.727612577823;ZNF148:-0.745758638031;NHLH1,2:-0.756798564864;RXRA_VDR{dimer}:-0.777936977711;EVI1:-0.780324085172;PRRX1,2:-0.782259809346;TFCP2:-0.827193523834;MTE{core}:-0.834971558643;SOX5:-0.838787305812;YY1:-0.862232991649;FOXO1,3,4:-0.865770917329;NR5A1,2:-0.902804382597;GTF2A1,2:-0.925340665651;TEAD1:-0.944622860919;SOX{8,9,10}:-0.951682054418;NR6A1:-0.953451477404;HIC1:-1.01762574642;AR:-1.02806621292;GFI1B:-1.08497279946;ONECUT1,2:-1.12095505684;NRF1:-1.12558879501;IKZF1:-1.13115719786;ZNF143:-1.13403556135;ARID5B:-1.13898846103;REST:-1.15312498726;POU6F1:-1.15372129536;GTF2I:-1.18846606837;TOPORS:-1.19300085696;FOXM1:-1.20902400059;PRDM1:-1.21187836784;HOX{A4,D4}:-1.2275389645;UFEwm:-1.2282311081;TLX1..3_NFIC{dimer}:-1.24284526586;FOX{I1,J2}:-1.24883473574;XCPE1{core}:-1.27371797816;EBF1:-1.27380113266;TFAP2B:-1.28251956042;MTF1:-1.28801698167;KLF4:-1.30081638555;ADNP_IRX_SIX_ZHX:-1.33019038329;FOXL1:-1.34117657551;PATZ1:-1.34589801124;TEF:-1.3730466976;GATA4:-1.39096656892;bHLH_family:-1.39663884457;RBPJ:-1.41009820565;RREB1:-1.44938251406;HOX{A6,A7,B6,B7}:-1.47782745819;ZNF384:-1.47897006037;NR1H4:-1.48868316554;FOXD3:-1.50263761374;LEF1_TCF7_TCF7L1,2:-1.52212644074;ZNF238:-1.56073258436;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.5630918707;GZF1:-1.68254241863;T:-1.74370365162;TFAP4:-1.77009894657;PBX1:-1.82039993493;PDX1:-1.89239819597;DBP:-1.98100329815;ZNF423:-2.22959281669;RXR{A,B,G}:-2.82674107891 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11904-125F5;search_select_hide=table117:FF:11904-125F5 | |||
}} | }} | ||
Latest revision as of 18:28, 4 June 2020
| Name: | immature langerhans cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13537 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13537
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13537
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.339 |
| 10 | 10 | 0.0186 |
| 100 | 100 | 0.358 |
| 101 | 101 | 0.561 |
| 102 | 102 | 0.657 |
| 103 | 103 | 0.0465 |
| 104 | 104 | 0.669 |
| 105 | 105 | 0.482 |
| 106 | 106 | 4.93165e-4 |
| 107 | 107 | 0.734 |
| 108 | 108 | 0.771 |
| 109 | 109 | 0.364 |
| 11 | 11 | 0.779 |
| 110 | 110 | 0.825 |
| 111 | 111 | 0.684 |
| 112 | 112 | 0.128 |
| 113 | 113 | 0.738 |
| 114 | 114 | 0.705 |
| 115 | 115 | 0.0642 |
| 116 | 116 | 0.412 |
| 117 | 117 | 0.12 |
| 118 | 118 | 0.322 |
| 119 | 119 | 0.887 |
| 12 | 12 | 0.506 |
| 120 | 120 | 0.71 |
| 121 | 121 | 0.265 |
| 122 | 122 | 0.176 |
| 123 | 123 | 0.67 |
| 124 | 124 | 0.582 |
| 125 | 125 | 0.329 |
| 126 | 126 | 0.0129 |
| 127 | 127 | 0.39 |
| 128 | 128 | 0.277 |
| 129 | 129 | 0.748 |
| 13 | 13 | 0.0101 |
| 130 | 130 | 0.938 |
| 131 | 131 | 0.722 |
| 132 | 132 | 0.0197 |
| 133 | 133 | 0.173 |
| 134 | 134 | 0.464 |
| 135 | 135 | 0.361 |
| 136 | 136 | 0.129 |
| 137 | 137 | 0.00102 |
| 138 | 138 | 0.791 |
| 139 | 139 | 0.549 |
| 14 | 14 | 0.975 |
| 140 | 140 | 0.0514 |
| 141 | 141 | 0.573 |
| 142 | 142 | 0.981 |
| 143 | 143 | 0.316 |
| 144 | 144 | 0.516 |
| 145 | 145 | 0.259 |
| 146 | 146 | 0.382 |
| 147 | 147 | 0.0796 |
| 148 | 148 | 0.00733 |
| 149 | 149 | 0.202 |
| 15 | 15 | 0.272 |
| 150 | 150 | 0.231 |
| 151 | 151 | 0.538 |
| 152 | 152 | 0.241 |
| 153 | 153 | 0.353 |
| 154 | 154 | 0.204 |
| 155 | 155 | 0.0541 |
| 156 | 156 | 0.521 |
| 157 | 157 | 0.456 |
| 158 | 158 | 0.144 |
| 159 | 159 | 0.298 |
| 16 | 16 | 0.806 |
| 160 | 160 | 0.258 |
| 161 | 161 | 0.669 |
| 162 | 162 | 0.0574 |
| 163 | 163 | 0.158 |
| 164 | 164 | 0.098 |
| 165 | 165 | 0.17 |
| 166 | 166 | 0.154 |
| 167 | 167 | 0.763 |
| 168 | 168 | 0.467 |
| 169 | 169 | 0.871 |
| 17 | 17 | 0.637 |
| 18 | 18 | 0.692 |
| 19 | 19 | 0.529 |
| 2 | 2 | 0.442 |
| 20 | 20 | 0.083 |
| 21 | 21 | 0.613 |
| 22 | 22 | 0.578 |
| 23 | 23 | 0.415 |
| 24 | 24 | 0.108 |
| 25 | 25 | 0.295 |
| 26 | 26 | 0.525 |
| 27 | 27 | 0.148 |
| 28 | 28 | 0.497 |
| 29 | 29 | 0.0775 |
| 3 | 3 | 0.482 |
| 30 | 30 | 0.703 |
| 31 | 31 | 0.549 |
| 32 | 32 | 0.00985 |
| 33 | 33 | 0.0901 |
| 34 | 34 | 0.549 |
| 35 | 35 | 0.356 |
| 36 | 36 | 0.281 |
| 37 | 37 | 0.199 |
| 38 | 38 | 0.739 |
| 39 | 39 | 0.793 |
| 4 | 4 | 0.679 |
| 40 | 40 | 0.703 |
| 41 | 41 | 0.223 |
| 42 | 42 | 0.543 |
| 43 | 43 | 0.261 |
| 44 | 44 | 0.412 |
| 45 | 45 | 0.952 |
| 46 | 46 | 0.75 |
| 47 | 47 | 0.702 |
| 48 | 48 | 0.814 |
| 49 | 49 | 0.283 |
| 5 | 5 | 0.542 |
| 50 | 50 | 0.987 |
| 51 | 51 | 0.529 |
| 52 | 52 | 0.165 |
| 53 | 53 | 0.948 |
| 54 | 54 | 0.884 |
| 55 | 55 | 0.908 |
| 56 | 56 | 0.579 |
| 57 | 57 | 0.867 |
| 58 | 58 | 0.18 |
| 59 | 59 | 0.573 |
| 6 | 6 | 0.805 |
| 60 | 60 | 0.131 |
| 61 | 61 | 0.942 |
| 62 | 62 | 0.264 |
| 63 | 63 | 0.866 |
| 64 | 64 | 0.737 |
| 65 | 65 | 0.856 |
| 66 | 66 | 0.732 |
| 67 | 67 | 0.934 |
| 68 | 68 | 0.0822 |
| 69 | 69 | 0.0151 |
| 7 | 7 | 0.21 |
| 70 | 70 | 0.585 |
| 71 | 71 | 0.0555 |
| 72 | 72 | 0.0183 |
| 73 | 73 | 0.247 |
| 74 | 74 | 0.115 |
| 75 | 75 | 0.183 |
| 76 | 76 | 0.0679 |
| 77 | 77 | 0.617 |
| 78 | 78 | 0.00608 |
| 79 | 79 | 0.773 |
| 8 | 8 | 0.396 |
| 80 | 80 | 0.97 |
| 81 | 81 | 0.489 |
| 82 | 82 | 0.605 |
| 83 | 83 | 0.0148 |
| 84 | 84 | 0.0632 |
| 85 | 85 | 0.243 |
| 86 | 86 | 0.0632 |
| 87 | 87 | 0.137 |
| 88 | 88 | 0.182 |
| 89 | 89 | 0.622 |
| 9 | 9 | 0.796 |
| 90 | 90 | 0.0312 |
| 91 | 91 | 0.5 |
| 92 | 92 | 0.395 |
| 93 | 93 | 0.39 |
| 94 | 94 | 0.161 |
| 95 | 95 | 0.26 |
| 96 | 96 | 0.267 |
| 97 | 97 | 0.581 |
| 98 | 98 | 0.531 |
| 99 | 99 | 8.16441e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13537
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)
0000840 (immature conventional dendritic cell)
0001014 (CD1a-positive Langerhans cell)
0001016 (immature CD1a-positive Langerhans cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011135 (human immature langerhans cells sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
