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(Created page with "{{f5samples |id=FF:11689-122I6 |name=Retinal Pigment Epithelial Cells, donor3 |sample_id=11689 |rna_tube_id=122I6 |rna_box=122 |rna_position=I6 |sample_cell_lot= |samp...")
 
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{{f5samples
{{f5samples
|id=FF:11689-122I6
|DRA_sample_Accession=CAGE@SAMD00004906
|name=Retinal Pigment Epithelial Cells, donor3
|accession_numbers=CAGE;DRX008443;DRR009315;DRZ000740;DRZ002125;DRZ012090;DRZ013475
|sample_id=11689
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000966,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0005388,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0001781,UBERON:0001032,UBERON:0010317,UBERON:0001782,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001802,UBERON:0004456,UBERON:0001456,UBERON:0010230
|rna_tube_id=122I6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000255,CL:0000149,CL:0002586
|rna_box=122
|rna_position=I6
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=Sciencell/3H
|rna_lot_number=4143.00000
|rna_catalog_number=SC6545
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=eye
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=retinal pigment epithelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=0.30000
|sample_note=
|profile_hcage=CNhs12733,LSID960,,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000147,CL:0000149,CL:0000255,CL:0000325,CL:0000548,CL:0002371,CL:0002586
|ancestors_in_anatomy_facet=UBERON:0000019,UBERON:0000020,UBERON:0000033,UBERON:0000047,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000073,UBERON:0000119,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000966,UBERON:0000970,UBERON:0001016,UBERON:0001032,UBERON:0001048,UBERON:0001062,UBERON:0001444,UBERON:0001456,UBERON:0001781,UBERON:0001782,UBERON:0001802,UBERON:0002050,UBERON:0002104,UBERON:0002346,UBERON:0002532,UBERON:0003056,UBERON:0003071,UBERON:0003072,UBERON:0003075,UBERON:0004121,UBERON:0004128,UBERON:0004456,UBERON:0004923,UBERON:0005085,UBERON:0005291,UBERON:0005388,UBERON:0005423,UBERON:0005424,UBERON:0005743,UBERON:0006598,UBERON:0007284,UBERON:0007625
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000158
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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COR2!0.62!44.25!NCOR2;;chr16:88519669..88519726,+!p1@ZFPM1!0.62!34.16!ZFPM1;;chr9:73029219..73029289,-!p2@KLF9!0.62!11.06!KLF9;;chr12:66218212..66218244,+!p5@HMGA2!0.62!4.88!HMGA2;;chr20:6748325..6748352,+!p1@BMP2!0.62!4.88!BMP2;;chr12:26277817..26277863,-!p2@BHLHE41!0.62!4.56!BHLHE41;;chr2:46602901..46602926,+!p7@EPAS1!0.62!4.56!EPAS1;;chr1:212782094..212782109,+!p1@ATF3!0.61!101.84!ATF3;;chr13:45151259..45151326,-!p2@TSC22D1!0.61!21.80!TSC22D1;;chr5:92919100..92919135,+!p3@NR2F1!0.61!3.90!NR2F1;;chr17:38465441..38465481,+!p6@RARA!0.61!3.90!RARA;;chr1:170632285..170632309,+!p1@PRRX1!0.61!3.58!PRRX1;;chr3:193853927..193853944,+!p1@HES1!0.60!119.09!HES1;;chr7:6655225..6655279,+!p1@ENST00000457543!0.60!4.88!ZNF853;;chr18:19749386..19749404,+!p2@GATA6!0.60!4.56!GATA6;;chr8:86089369..86089408,+!p1@E2F5!0.59!9.11!E2F5;;chr7:113726357..113726443,+!p1@FOXP2!0.59!5.53!FOXP2;;chrX:84498989..84499003,+!p1@ZNF711!0.59!4.23!ZNF711;;chr12:66218443..66218461,+!p8@HMGA2!0.59!3.90!HMGA2;;chr15:37391588..37391604,-!p11@MEIS2!0.59!3.90!MEIS2;;chr17:38498510..38498540,+!p7@RARA!0.59!3.58!RARA;;chr3:25469815..25469866,+!p3@RARB!0.59!2.93!RARB;;chr3:25470156..25470227,+!p2@RARB!0.59!2.93!RARB;;chr11:46299443..46299459,+!p4@CREB3L1!0.59!2.93!CREB3L1;;chr12:66218904..66218913,+!p11@HMGA2!0.59!2.93!HMGA2;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.59!2.93!ZNF177;;chr20:42574529..42574563,+!p3@TOX2!0.59!2.93!TOX2;;chr18:3450161..3450183,+!p1@TGIF1!0.58!118.76!TGIF1;;chr19:45971246..45971265,+!p1@FOSB!0.58!65.08!FOSB;;chr12:66218573..66218596,+!p7@HMGA2!0.58!4.56!HMGA2;;chr3:141105705..141105770,+!p4@ZBTB38!0.58!3.58!ZBTB38;;chr15:66994561..66994597,+!p2@SMAD6!0.57!7.48!SMAD6;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.57!6.83!SOHLH2;;chr5:72744562..72744573,-!p3@FOXD1!0.57!3.58!FOXD1;;chr7:14028743..14028799,-!p3@ETV1!0.57!3.58!ETV1;;chr3:52001426..52001447,-!p3@PCBP4!0.56!8.79!PCBP4;;chr20:2673383..2673441,+!p1@EBF4!0.56!4.56!EBF4;;chr1:170632959..170632987,+!p4@PRRX1!0.56!2.93!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.56!2.60!FOXS1;;chr2:45169233..45169244,+!p10@SIX3!0.56!2.60!SIX3;;chr2:63277978..63277995,+!p2@OTX1!0.56!2.60!OTX1;;chr4:299227..299272,-!p1@ZNF732!0.56!2.60!ZNF732;;chr15:66994885..66994904,+!p7@SMAD6!0.56!2.60!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.56!2.60!SMAD3;;chr16:86612320..86612394,+!p1@FOXL1!0.56!2.60!FOXL1;;chr6:34204672..34204692,+!p1@HMGA1!0.55!368.65!HMGA1;;chr9:114287433..114287513,+!p1@ZNF483!0.55!7.81!ZNF483;;chr6:41514078..41514158,+!p1@FOXP4!0.54!27.98!FOXP4;;chr11:46299199..46299233,+!p1@CREB3L1!0.54!15.94!CREB3L1;;chr2:71127699..71127744,+!p1@VAX2!0.54!5.86!VAX2;;chr15:37390850..37390909,-!p3@MEIS2!0.54!5.53!MEIS2;;chr2:25475120..25475176,-!p2@DNMT3A!0.54!3.58!DNMT3A;;chr6:21597283..21597312,+!p7@SOX4!0.54!3.58!SOX4;;chr5:76383070..76383117,-!p3@ZBED3!0.53!5.53!ZBED3;;chr8:128750555..128750609,+!p5@MYC!0.53!5.53!MYC;;chr3:52001396..52001425,-!p4@PCBP4!0.53!4.88!PCBP4;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.53!4.56!MEIS3P1;;chr19:49864746..49864780,-!p2@TEAD2!0.53!3.58!TEAD2;;chr17:46126136..46126152,+!p1@NFE2L1!0.52!154.23!NFE2L1;;chr19:45909594..45909625,-!p2@PPP1R13L!0.52!13.34!PPP1R13L;;chr19:53758058..53758088,-!p2@ZNF677!0.52!9.44!ZNF677;;chr6:126102254..126102289,+!p5@NCOA7!0.52!7.81!NCOA7;;chr18:3450293..3450304,+!p4@TGIF1!0.52!6.83!TGIF1;;chr3:12329397..12329433,+!p2@PPARG!0.52!6.18!PPARG;;chr8:60031682..60031710,-!p2@TOX!0.52!4.23!TOX;;chr8:128750983..128751021,+!p11@MYC!0.52!3.58!MYC;;chr9:126774091..126774098,+!p4@LHX2!0.52!2.28!LHX2;;chr1:170632439..170632465,+!p11@PRRX1!0.52!2.28!PRRX1;;chr1:2985566..2985608,+!p3@PRDM16!0.52!2.28!PRDM16;;chr2:45169172..45169177,+!p11@SIX3!0.52!2.28!SIX3;;chr10:28032421..28032494,-!p2@MKX!0.52!2.28!MKX;;chr11:125034605..125034636,+!p2@PKNOX2!0.52!2.28!PKNOX2;;chr22:39916558..39916579,+!p1@ATF4!0.51!859.32!ATF4;;chr2:60780607..60780624,-!p2@BCL11A!0.51!8.46!BCL11A;;chr20:45142154..45142227,-!p1@ZNF334!0.51!5.21!ZNF334;;chr19:22817119..22817145,+!p1@ZNF492!0.51!4.23!ZNF492;;chr15:96869292..96869320,+!p15@NR2F2!0.51!3.58!NR2F2;;chr19:57183114..57183145,-!p1@ZNF835!0.51!2.60!ZNF835;;chr3:170076223..170076242,+!p6@SKIL!0.51!2.60!SKIL;;chr17:7590797..7590815,-!p1@TP53!0.50!125.27!TP53;;chr5:133450365..133450444,+!p1@TCF7!0.50!12.69!TCF7;;chr20:48807456..48807475,+!p3@CEBPB!0.50!4.88!CEBPB;;chr15:96869255..96869291,+!p6@NR2F2!0.50!4.56!NR2F2;;chr17:38504601..38504634,+!p9@RARA!0.50!2.60!RARA;;chr19:42759266..42759290,-!p1@ERF!0.49!88.83!ERF;;chr15:37392724..37392757,-!p1@MEIS2!0.49!12.36!MEIS2;;chr11:62369108..62369183,-!p3@MTA2!0.48!35.14!MTA2;;chr7:64838754..64838778,+!p1@ZNF92!0.48!26.03!ZNF92;;chr9:14314131..14314147,-!p2@NFIB!0.48!14.64!NFIB;;chr17:4981745..4981810,+!p1@ZFP3!0.48!13.02!ZFP3;;chr9:128509663..128509715,+!p1@PBX3!0.48!8.79!PBX3;;chr5:92918894..92918912,+!p2@NR2F1!0.48!8.46!NR2F1;;chr12:125002827..125002855,-!p5@NCOR2!0.48!3.25!NCOR2;;chr5:92919068..92919082,+!p5@NR2F1!0.48!2.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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000147;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002586;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000966;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001781;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007625
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Retinal%2520Pigment%2520Epithelial%2520Cells%252c%2520donor3.CNhs12733.11689-122I6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Retinal%2520Pigment%2520Epithelial%2520Cells%252c%2520donor3.CNhs12733.11689-122I6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Retinal%2520Pigment%2520Epithelial%2520Cells%252c%2520donor3.CNhs12733.11689-122I6.hg38.nobarcode.ctss.bed.gz
|id=FF:11689-122I6
|is_a=EFO:0002091;;FF:0000158
|is_obsolete=
|library_id=CNhs12733
|library_id_phase_based=2:CNhs12733
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11689
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11689
|name=Retinal Pigment Epithelial Cells, donor3
|namespace=FANTOM5
|part_of=
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|profile_hcage=CNhs12733,LSID960,release012,COMPLETED
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|rna_box=122
|rna_catalog_number=SC6545
|rna_concentration=0.3
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=4143
|rna_od260/230=
|rna_od260/280=
|rna_position=I6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=122I6
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=retinal pigment epithelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.6530188381742e-235!GO:0005737;cytoplasm;2.98082705085494e-191!GO:0043226;organelle;2.72433198869468e-186!GO:0043229;intracellular organelle;6.63168106354645e-186!GO:0043231;intracellular membrane-bound organelle;2.66925917896355e-185!GO:0043227;membrane-bound organelle;4.67231381707136e-185!GO:0044444;cytoplasmic part;2.09391250723065e-137!GO:0044422;organelle part;4.89898900604472e-134!GO:0044446;intracellular organelle part;1.08039740670475e-132!GO:0030529;ribonucleoprotein complex;2.55936619517964e-88!GO:0032991;macromolecular complex;5.94708206803023e-88!GO:0044237;cellular metabolic process;1.7352592937237e-87!GO:0044238;primary metabolic process;5.21610096649026e-84!GO:0043233;organelle lumen;2.05462599067262e-72!GO:0031974;membrane-enclosed lumen;2.05462599067262e-72!GO:0005739;mitochondrion;4.63853678665192e-72!GO:0043170;macromolecule metabolic process;4.86242559193443e-70!GO:0003723;RNA binding;5.77874263336499e-70!GO:0044428;nuclear part;3.82244879086263e-68!GO:0005515;protein binding;6.11037212974218e-68!GO:0005634;nucleus;2.64095139611421e-66!GO:0005840;ribosome;2.80822924450231e-53!GO:0006396;RNA processing;6.10330024829154e-53!GO:0031090;organelle membrane;1.62252532611587e-50!GO:0006412;translation;5.17638813083746e-50!GO:0009058;biosynthetic process;3.63141846560787e-47!GO:0044429;mitochondrial part;6.18809103991286e-46!GO:0044249;cellular biosynthetic process;1.71123302109251e-45!GO:0003735;structural constituent of ribosome;3.31268804699503e-45!GO:0016043;cellular component organization and biogenesis;4.21171649030592e-45!GO:0015031;protein transport;8.97034403722068e-44!GO:0033036;macromolecule localization;1.4709356725497e-43!GO:0019538;protein metabolic process;2.86383181607898e-43!GO:0031981;nuclear lumen;4.49154035673413e-41!GO:0043234;protein complex;5.12445325143665e-41!GO:0033279;ribosomal subunit;5.64990774981242e-40!GO:0008104;protein localization;7.12031252950728e-40!GO:0010467;gene expression;7.78023843316176e-40!GO:0045184;establishment of protein localization;1.31752262746554e-39!GO:0031967;organelle envelope;2.42903522113798e-39!GO:0044260;cellular macromolecule metabolic process;5.86077189789859e-39!GO:0031975;envelope;6.05991066077155e-39!GO:0009059;macromolecule biosynthetic process;1.11779792029172e-38!GO:0044267;cellular protein metabolic process;2.15765159214672e-38!GO:0016071;mRNA metabolic process;4.93511688096293e-38!GO:0043283;biopolymer metabolic process;1.53079825092616e-37!GO:0005829;cytosol;3.1420798171732e-36!GO:0046907;intracellular transport;1.61278915341902e-35!GO:0008380;RNA splicing;3.04102676216993e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.45007847286266e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.19579835740574e-33!GO:0006397;mRNA processing;7.54064044636017e-33!GO:0006996;organelle organization and biogenesis;1.66868248990742e-31!GO:0065003;macromolecular complex assembly;3.12414624536402e-30!GO:0006886;intracellular protein transport;9.20702993062254e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.06029299487785e-28!GO:0043228;non-membrane-bound organelle;7.67029043674545e-28!GO:0043232;intracellular non-membrane-bound organelle;7.67029043674545e-28!GO:0005740;mitochondrial envelope;2.2636089862301e-27!GO:0048770;pigment granule;2.4208851572891e-27!GO:0042470;melanosome;2.4208851572891e-27!GO:0022607;cellular component assembly;3.06496595386323e-27!GO:0019866;organelle inner membrane;1.01014383284611e-26!GO:0031966;mitochondrial membrane;1.10241589625563e-25!GO:0005681;spliceosome;2.36865676125809e-25!GO:0005743;mitochondrial inner membrane;3.20261036856734e-25!GO:0005654;nucleoplasm;4.58119353664559e-23!GO:0031980;mitochondrial lumen;2.0385595699361e-22!GO:0005759;mitochondrial matrix;2.0385595699361e-22!GO:0006119;oxidative phosphorylation;4.76641695706314e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;7.04198265128107e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.32060877593191e-22!GO:0051649;establishment of cellular localization;8.27041522174061e-22!GO:0016462;pyrophosphatase activity;9.23057224560673e-22!GO:0044445;cytosolic part;1.74890634338367e-21!GO:0051641;cellular localization;2.35138559403006e-21!GO:0006457;protein folding;2.73927619743671e-21!GO:0000166;nucleotide binding;3.33846651259157e-21!GO:0012505;endomembrane system;1.2530041725889e-20!GO:0015935;small ribosomal subunit;1.39201150064922e-20!GO:0015934;large ribosomal subunit;1.96732660245239e-20!GO:0005730;nucleolus;2.85717052580523e-20!GO:0017111;nucleoside-triphosphatase activity;3.56495479799052e-20!GO:0003676;nucleic acid binding;5.50737671668196e-20!GO:0006259;DNA metabolic process;2.36940096845389e-19!GO:0044451;nucleoplasm part;4.8176318973464e-19!GO:0044455;mitochondrial membrane part;1.19262158269814e-18!GO:0016874;ligase activity;2.57145320881722e-18!GO:0005783;endoplasmic reticulum;8.90284925658338e-18!GO:0022618;protein-RNA complex assembly;1.54420348122276e-17!GO:0051186;cofactor metabolic process;2.79112040592408e-17!GO:0016070;RNA metabolic process;2.80592214935426e-16!GO:0005761;mitochondrial ribosome;4.72933048170553e-16!GO:0000313;organellar ribosome;4.72933048170553e-16!GO:0042254;ribosome biogenesis and assembly;5.80282395347877e-16!GO:0044265;cellular macromolecule catabolic process;6.13169295660648e-16!GO:0008135;translation factor activity, nucleic acid binding;9.61875302419477e-16!GO:0008134;transcription factor binding;1.33852357128476e-15!GO:0005746;mitochondrial respiratory chain;3.29733700339015e-15!GO:0051082;unfolded protein binding;6.7068122909438e-15!GO:0006605;protein targeting;1.00591711620145e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.0568366699998e-14!GO:0044432;endoplasmic reticulum part;1.07032302125408e-14!GO:0044248;cellular catabolic process;1.15459549325587e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.4438062833573e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.66840363044714e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.99295001793994e-14!GO:0006512;ubiquitin cycle;3.19636765228922e-14!GO:0019941;modification-dependent protein catabolic process;4.06537860442591e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.06537860442591e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.97223626314262e-14!GO:0032553;ribonucleotide binding;5.11675680620028e-14!GO:0032555;purine ribonucleotide binding;5.11675680620028e-14!GO:0043285;biopolymer catabolic process;5.63906628884882e-14!GO:0006732;coenzyme metabolic process;6.73751722079299e-14!GO:0017076;purine nucleotide binding;7.62450759838227e-14!GO:0044257;cellular protein catabolic process;7.85314868417963e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.0759864103395e-13!GO:0003954;NADH dehydrogenase activity;1.0759864103395e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.0759864103395e-13!GO:0009057;macromolecule catabolic process;1.5152552194773e-13!GO:0005794;Golgi apparatus;1.85263438616894e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.40264461244772e-13!GO:0007049;cell cycle;3.3044747187757e-13!GO:0005635;nuclear envelope;9.62753742861636e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.42825381834333e-12!GO:0048193;Golgi vesicle transport;2.21792781887289e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.6052587692604e-12!GO:0042773;ATP synthesis coupled electron transport;4.6052587692604e-12!GO:0031965;nuclear membrane;6.79401474011579e-12!GO:0030964;NADH dehydrogenase complex (quinone);6.79401474011579e-12!GO:0045271;respiratory chain complex I;6.79401474011579e-12!GO:0005747;mitochondrial respiratory chain complex I;6.79401474011579e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.776907550046e-12!GO:0000375;RNA splicing, via transesterification reactions;8.776907550046e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.776907550046e-12!GO:0030163;protein catabolic process;1.05372043090217e-11!GO:0003743;translation initiation factor activity;1.07233466203476e-11!GO:0006399;tRNA metabolic process;1.07984688354659e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.70075345494175e-11!GO:0006974;response to DNA damage stimulus;1.7925948699118e-11!GO:0006413;translational initiation;3.19213335798986e-11!GO:0009259;ribonucleotide metabolic process;4.34980698611822e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.5143802192579e-11!GO:0006163;purine nucleotide metabolic process;6.27420747183473e-11!GO:0006446;regulation of translational initiation;6.4364466387424e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.57109242618148e-11!GO:0005789;endoplasmic reticulum membrane;9.15782781048132e-11!GO:0016192;vesicle-mediated transport;9.79360405757131e-11!GO:0044453;nuclear membrane part;1.03397551480763e-10!GO:0006364;rRNA processing;1.49488243927102e-10!GO:0009055;electron carrier activity;1.93586713795936e-10!GO:0008565;protein transporter activity;2.13814107331518e-10!GO:0016072;rRNA metabolic process;2.20082878020784e-10!GO:0003712;transcription cofactor activity;2.32686202508727e-10!GO:0009150;purine ribonucleotide metabolic process;2.48481739948986e-10!GO:0016887;ATPase activity;2.94738196273989e-10!GO:0043412;biopolymer modification;3.05082412393604e-10!GO:0042623;ATPase activity, coupled;3.28313084657571e-10!GO:0006164;purine nucleotide biosynthetic process;3.57025535879262e-10!GO:0005524;ATP binding;3.66670688321669e-10!GO:0009260;ribonucleotide biosynthetic process;7.30444780522224e-10!GO:0032559;adenyl ribonucleotide binding;8.0050543957488e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.15616162307045e-09!GO:0045333;cellular respiration;1.3951478650942e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.40734835932323e-09!GO:0030554;adenyl nucleotide binding;1.47637953517234e-09!GO:0022402;cell cycle process;1.97345740093242e-09!GO:0016604;nuclear body;2.06618494159067e-09!GO:0009060;aerobic respiration;3.1337765468297e-09!GO:0005643;nuclear pore;3.56380745798164e-09!GO:0015986;ATP synthesis coupled proton transport;3.62794088729017e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.62794088729017e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.55664818869787e-09!GO:0051188;cofactor biosynthetic process;4.58243928708282e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.14023372723184e-09!GO:0004812;aminoacyl-tRNA ligase activity;5.14023372723184e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.14023372723184e-09!GO:0006464;protein modification process;5.30331796268863e-09!GO:0065002;intracellular protein transport across a membrane;6.09359780359512e-09!GO:0003924;GTPase activity;6.47196618995256e-09!GO:0009056;catabolic process;6.61057613248491e-09!GO:0006913;nucleocytoplasmic transport;6.69213555579427e-09!GO:0006281;DNA repair;6.94171110256225e-09!GO:0009141;nucleoside triphosphate metabolic process;7.16704436854082e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.78869245168942e-09!GO:0009144;purine nucleoside triphosphate metabolic process;7.78869245168942e-09!GO:0019829;cation-transporting ATPase activity;8.32521777847564e-09!GO:0006461;protein complex assembly;1.0649304119604e-08!GO:0012501;programmed cell death;1.20877284889895e-08!GO:0043038;amino acid activation;1.20877284889895e-08!GO:0006418;tRNA aminoacylation for protein translation;1.20877284889895e-08!GO:0043039;tRNA aminoacylation;1.20877284889895e-08!GO:0051169;nuclear transport;1.25181516896873e-08!GO:0005768;endosome;1.27385877523396e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.50177551730099e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.60017911666908e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.60017911666908e-08!GO:0051276;chromosome organization and biogenesis;1.93440260679928e-08!GO:0004386;helicase activity;2.07206329557074e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.19161099439113e-08!GO:0005793;ER-Golgi intermediate compartment;2.46195136377168e-08!GO:0006915;apoptosis;2.51009647583376e-08!GO:0016607;nuclear speck;2.65257667669555e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.82537299255299e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.82537299255299e-08!GO:0009719;response to endogenous stimulus;3.01129920857368e-08!GO:0006403;RNA localization;3.03241453899818e-08!GO:0050657;nucleic acid transport;3.1629416292042e-08!GO:0051236;establishment of RNA localization;3.1629416292042e-08!GO:0050658;RNA transport;3.1629416292042e-08!GO:0016491;oxidoreductase activity;3.29012310272327e-08!GO:0031988;membrane-bound vesicle;3.30815717176095e-08!GO:0046034;ATP metabolic process;3.36152048514542e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;3.37501055473488e-08!GO:0008639;small protein conjugating enzyme activity;4.18581537540485e-08!GO:0016023;cytoplasmic membrane-bound vesicle;4.23398442785191e-08!GO:0007005;mitochondrion organization and biogenesis;4.28733365996532e-08!GO:0065004;protein-DNA complex assembly;5.07109323862813e-08!GO:0008026;ATP-dependent helicase activity;5.49291547866431e-08!GO:0005773;vacuole;8.2317694538044e-08!GO:0004842;ubiquitin-protein ligase activity;8.26548082368546e-08!GO:0008219;cell death;8.91069063100836e-08!GO:0016265;death;8.91069063100836e-08!GO:0006754;ATP biosynthetic process;9.8992394653815e-08!GO:0006753;nucleoside phosphate metabolic process;9.8992394653815e-08!GO:0006323;DNA packaging;1.00895144448663e-07!GO:0017038;protein import;1.1246843959556e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.16490929721218e-07!GO:0006099;tricarboxylic acid cycle;1.22155269489188e-07!GO:0046356;acetyl-CoA catabolic process;1.22155269489188e-07!GO:0048475;coated membrane;1.23424890661781e-07!GO:0030117;membrane coat;1.23424890661781e-07!GO:0000278;mitotic cell cycle;1.39746653274592e-07!GO:0019787;small conjugating protein ligase activity;2.29047451607326e-07!GO:0009108;coenzyme biosynthetic process;2.34313887932819e-07!GO:0046930;pore complex;2.55904972809589e-07!GO:0009117;nucleotide metabolic process;2.57753575526752e-07!GO:0006084;acetyl-CoA metabolic process;2.83691097404012e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.0305512784714e-07!GO:0051187;cofactor catabolic process;3.47671624782877e-07!GO:0043687;post-translational protein modification;3.99460590332533e-07!GO:0005667;transcription factor complex;4.07365602643343e-07!GO:0006366;transcription from RNA polymerase II promoter;4.67857741408128e-07!GO:0003714;transcription corepressor activity;5.42675376241643e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.75853191665766e-07!GO:0009109;coenzyme catabolic process;6.19289582891604e-07!GO:0000323;lytic vacuole;6.80924073736498e-07!GO:0005764;lysosome;6.80924073736498e-07!GO:0005694;chromosome;7.70240112857495e-07!GO:0005770;late endosome;7.76948466925666e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.42925868515644e-07!GO:0005525;GTP binding;8.59366591118215e-07!GO:0006260;DNA replication;8.97134531717788e-07!GO:0030120;vesicle coat;1.00040624015978e-06!GO:0030662;coated vesicle membrane;1.00040624015978e-06!GO:0031982;vesicle;1.16547130424355e-06!GO:0000074;regulation of progression through cell cycle;1.2703429382935e-06!GO:0016881;acid-amino acid ligase activity;1.2834953522873e-06!GO:0051726;regulation of cell cycle;1.31778449771419e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.31799691297711e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.39334523729688e-06!GO:0051028;mRNA transport;1.40696447691077e-06!GO:0031410;cytoplasmic vesicle;1.60263746133402e-06!GO:0048523;negative regulation of cellular process;1.65851099766724e-06!GO:0008654;phospholipid biosynthetic process;2.0096569911969e-06!GO:0015630;microtubule cytoskeleton;2.43172509010428e-06!GO:0006752;group transfer coenzyme metabolic process;3.56942103151358e-06!GO:0044431;Golgi apparatus part;3.9719208826388e-06!GO:0043566;structure-specific DNA binding;4.11679649156559e-06!GO:0045259;proton-transporting ATP synthase complex;4.27059145603945e-06!GO:0044440;endosomal part;4.94192182346881e-06!GO:0010008;endosome membrane;4.94192182346881e-06!GO:0044427;chromosomal part;5.02113853213612e-06!GO:0032561;guanyl ribonucleotide binding;5.28122134538441e-06!GO:0019001;guanyl nucleotide binding;5.28122134538441e-06!GO:0005798;Golgi-associated vesicle;5.46268720959288e-06!GO:0016853;isomerase activity;5.70794246921141e-06!GO:0015980;energy derivation by oxidation of organic compounds;6.07869921564848e-06!GO:0006333;chromatin assembly or disassembly;7.8642934532789e-06!GO:0005762;mitochondrial large ribosomal subunit;8.54742859103971e-06!GO:0000315;organellar large ribosomal subunit;8.54742859103971e-06!GO:0051246;regulation of protein metabolic process;8.90329325615098e-06!GO:0006613;cotranslational protein targeting to membrane;1.17080613846451e-05!GO:0043069;negative regulation of programmed cell death;1.17948741691546e-05!GO:0003697;single-stranded DNA binding;1.2323136821283e-05!GO:0000245;spliceosome assembly;1.38145704911484e-05!GO:0016787;hydrolase activity;1.39065940325979e-05!GO:0031252;leading edge;1.5390680515208e-05!GO:0048471;perinuclear region of cytoplasm;1.65974910354751e-05!GO:0050794;regulation of cellular process;1.73724355969547e-05!GO:0005788;endoplasmic reticulum lumen;1.94344508276706e-05!GO:0016740;transferase activity;1.95637300149606e-05!GO:0045786;negative regulation of progression through cell cycle;1.9785058311127e-05!GO:0003724;RNA helicase activity;2.04019057586609e-05!GO:0006414;translational elongation;2.13201413749295e-05!GO:0043021;ribonucleoprotein binding;2.31994068924622e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.38684986521804e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.52696770443769e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.52696770443769e-05!GO:0016567;protein ubiquitination;2.59255894439696e-05!GO:0032446;protein modification by small protein conjugation;2.62014083819485e-05!GO:0043066;negative regulation of apoptosis;2.68767010609527e-05!GO:0000314;organellar small ribosomal subunit;3.19966978235782e-05!GO:0005763;mitochondrial small ribosomal subunit;3.19966978235782e-05!GO:0016564;transcription repressor activity;3.2072701412079e-05!GO:0000785;chromatin;3.36168339158495e-05!GO:0022403;cell cycle phase;3.60614002337292e-05!GO:0006916;anti-apoptosis;3.86593546775252e-05!GO:0043623;cellular protein complex assembly;3.88646331598406e-05!GO:0016568;chromatin modification;3.94354134224497e-05!GO:0006091;generation of precursor metabolites and energy;3.98568160029484e-05!GO:0048519;negative regulation of biological process;4.43929377026319e-05!GO:0006334;nucleosome assembly;4.57625900960278e-05!GO:0000087;M phase of mitotic cell cycle;4.72882366967544e-05!GO:0051427;hormone receptor binding;4.7598243567164e-05!GO:0043067;regulation of programmed cell death;5.24420359533512e-05!GO:0007067;mitosis;5.9780912053218e-05!GO:0042981;regulation of apoptosis;7.5409498877601e-05!GO:0030867;rough endoplasmic reticulum membrane;8.42048042661147e-05!GO:0035257;nuclear hormone receptor binding;0.000102265579797547!GO:0046474;glycerophospholipid biosynthetic process;0.000109219763850391!GO:0003713;transcription coactivator activity;0.000110668195417226!GO:0005905;coated pit;0.00011826921564979!GO:0045454;cell redox homeostasis;0.000123996830107784!GO:0031497;chromatin assembly;0.000127761886903254!GO:0051789;response to protein stimulus;0.000139109214812633!GO:0006986;response to unfolded protein;0.000139109214812633!GO:0003899;DNA-directed RNA polymerase activity;0.000140360946134506!GO:0000151;ubiquitin ligase complex;0.000141635746810504!GO:0051170;nuclear import;0.000142525731037405!GO:0004298;threonine endopeptidase activity;0.000159565546250417!GO:0016779;nucleotidyltransferase activity;0.000162064393390731!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000163341289506328!GO:0051301;cell division;0.000169347552345465!GO:0019752;carboxylic acid metabolic process;0.000194142799353842!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00020989522464554!GO:0015399;primary active transmembrane transporter activity;0.00020989522464554!GO:0006082;organic acid metabolic process;0.00021442786120518!GO:0008033;tRNA processing;0.000221154050358179!GO:0008186;RNA-dependent ATPase activity;0.000232412475105337!GO:0005791;rough endoplasmic reticulum;0.000241839157984598!GO:0006612;protein targeting to membrane;0.0002444362049613!GO:0006606;protein import into nucleus;0.000248591041782579!GO:0043681;protein import into mitochondrion;0.000264442150757962!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000267957994528998!GO:0006383;transcription from RNA polymerase III promoter;0.000276047311095322!GO:0044452;nucleolar part;0.000277225922754625!GO:0006793;phosphorus metabolic process;0.000291167629696941!GO:0006796;phosphate metabolic process;0.000291167629696941!GO:0009165;nucleotide biosynthetic process;0.000295863422369698!GO:0019748;secondary metabolic process;0.000324424136127576!GO:0030118;clathrin coat;0.000333127065622491!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000340543254924561!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000342125832902571!GO:0006626;protein targeting to mitochondrion;0.000345855806325871!GO:0006839;mitochondrial transport;0.000353039462538943!GO:0016859;cis-trans isomerase activity;0.000399058025701514!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000436717136552931!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000437564591897338!GO:0031072;heat shock protein binding;0.000441521605642479!GO:0044262;cellular carbohydrate metabolic process;0.00044890051700479!GO:0000139;Golgi membrane;0.000449355880688869!GO:0008250;oligosaccharyl transferase complex;0.00048845001767558!GO:0030659;cytoplasmic vesicle membrane;0.000492325911000601!GO:0005769;early endosome;0.000529496840122952!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000579674127342171!GO:0043284;biopolymer biosynthetic process;0.000614688760532434!GO:0004004;ATP-dependent RNA helicase activity;0.000673587327422744!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000680841725965942!GO:0051168;nuclear export;0.000693167780464816!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000702729954250187!GO:0016363;nuclear matrix;0.000706059692736894!GO:0051920;peroxiredoxin activity;0.000729076862284705!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000846291126938558!GO:0004576;oligosaccharyl transferase activity;0.000879575866589874!GO:0016563;transcription activator activity;0.000897642249899349!GO:0006520;amino acid metabolic process;0.000920789737661898!GO:0007010;cytoskeleton organization and biogenesis;0.000924065939176809!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000925176549802912!GO:0044433;cytoplasmic vesicle part;0.000938638316276947!GO:0030036;actin cytoskeleton organization and biogenesis;0.000977908765968311!GO:0050789;regulation of biological process;0.000978721241528367!GO:0006402;mRNA catabolic process;0.000997109341811889!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00104358099590553!GO:0003729;mRNA binding;0.00105760889449706!GO:0016126;sterol biosynthetic process;0.00106002355307795!GO:0031968;organelle outer membrane;0.00109080178005395!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00115958657031261!GO:0019867;outer membrane;0.00120015749121292!GO:0046489;phosphoinositide biosynthetic process;0.00120475448564498!GO:0005813;centrosome;0.00125306519291765!GO:0005885;Arp2/3 protein complex;0.00141721913714969!GO:0051087;chaperone binding;0.00143125765714526!GO:0006891;intra-Golgi vesicle-mediated transport;0.00145490075499239!GO:0033116;ER-Golgi intermediate compartment membrane;0.00145947881081716!GO:0007040;lysosome organization and biogenesis;0.0015033188346665!GO:0003690;double-stranded DNA binding;0.0015033188346665!GO:0005048;signal sequence binding;0.0015033188346665!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0015033188346665!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0015033188346665!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0015033188346665!GO:0012506;vesicle membrane;0.0015033188346665!GO:0051287;NAD binding;0.00155913775796898!GO:0031124;mRNA 3'-end processing;0.00156184774192757!GO:0008610;lipid biosynthetic process;0.00158411204506374!GO:0006352;transcription initiation;0.00158411204506374!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00159112974634838!GO:0000049;tRNA binding;0.00159851357206655!GO:0042440;pigment metabolic process;0.00166514077021131!GO:0019899;enzyme binding;0.00175268750633032!GO:0016310;phosphorylation;0.00183820815222334!GO:0030133;transport vesicle;0.00184078537027888!GO:0005815;microtubule organizing center;0.00189527738566767!GO:0006650;glycerophospholipid metabolic process;0.00195178466986608!GO:0031324;negative regulation of cellular metabolic process;0.0019937193112505!GO:0007033;vacuole organization and biogenesis;0.0019937193112505!GO:0000279;M phase;0.00210244385730435!GO:0007050;cell cycle arrest;0.00216008499462409!GO:0008092;cytoskeletal protein binding;0.00222095873353442!GO:0051252;regulation of RNA metabolic process;0.00236286698997523!GO:0048500;signal recognition particle;0.00236558001948544!GO:0046467;membrane lipid biosynthetic process;0.00238093384344902!GO:0003746;translation elongation factor activity;0.00242736761524841!GO:0031902;late endosome membrane;0.00252753470548122!GO:0006401;RNA catabolic process;0.002574769039883!GO:0051329;interphase of mitotic cell cycle;0.00262379725682575!GO:0043492;ATPase activity, coupled to movement of substances;0.00262379725682575!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00268074446789792!GO:0005741;mitochondrial outer membrane;0.00283727034079152!GO:0008361;regulation of cell size;0.0028402510153582!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0028470973449536!GO:0019843;rRNA binding;0.00285415139669786!GO:0007006;mitochondrial membrane organization and biogenesis;0.00299445128920235!GO:0051325;interphase;0.0029955900088531!GO:0030658;transport vesicle membrane;0.00309501810598236!GO:0048487;beta-tubulin binding;0.0031126960275537!GO:0015992;proton transport;0.00314337208606795!GO:0018196;peptidyl-asparagine modification;0.00316211878669414!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00316211878669414!GO:0035258;steroid hormone receptor binding;0.00327818341108327!GO:0050662;coenzyme binding;0.00359545890689384!GO:0043488;regulation of mRNA stability;0.00359545890689384!GO:0043487;regulation of RNA stability;0.00359545890689384!GO:0019222;regulation of metabolic process;0.00362428288029625!GO:0030029;actin filament-based process;0.00363984525097821!GO:0005774;vacuolar membrane;0.00363984525097821!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00381331679097816!GO:0051539;4 iron, 4 sulfur cluster binding;0.00389206358012599!GO:0030131;clathrin adaptor complex;0.00396168186234532!GO:0016251;general RNA polymerase II transcription factor activity;0.00396168186234532!GO:0046148;pigment biosynthetic process;0.00396168186234532!GO:0006818;hydrogen transport;0.00396168186234532!GO:0030663;COPI coated vesicle membrane;0.00396168186234532!GO:0030126;COPI vesicle coat;0.00396168186234532!GO:0008312;7S RNA binding;0.00398273296075658!GO:0016049;cell growth;0.00402372558170391!GO:0003684;damaged DNA binding;0.00409342830149211!GO:0030880;RNA polymerase complex;0.00409633102973406!GO:0046483;heterocycle metabolic process;0.00423514091226086!GO:0030119;AP-type membrane coat adaptor complex;0.00443392458974973!GO:0001558;regulation of cell growth;0.00453525146100502!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00457414334831687!GO:0006289;nucleotide-excision repair;0.00479022212269354!GO:0006695;cholesterol biosynthetic process;0.0049711444967102!GO:0000059;protein import into nucleus, docking;0.00504556846999065!GO:0031123;RNA 3'-end processing;0.0052007623473141!GO:0006519;amino acid and derivative metabolic process;0.00526628747914177!GO:0015631;tubulin binding;0.00532106886649716!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00538313868080898!GO:0045047;protein targeting to ER;0.00538313868080898!GO:0016044;membrane organization and biogenesis;0.00548786079725292!GO:0043433;negative regulation of transcription factor activity;0.00548786079725292!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00553160241830332!GO:0030176;integral to endoplasmic reticulum membrane;0.00582593138006315!GO:0030660;Golgi-associated vesicle membrane;0.00589533836711814!GO:0043022;ribosome binding;0.00598430593714795!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00629317621536186!GO:0016741;transferase activity, transferring one-carbon groups;0.0066523914862703!GO:0030521;androgen receptor signaling pathway;0.00667540810454844!GO:0008168;methyltransferase activity;0.00690669556453377!GO:0022890;inorganic cation transmembrane transporter activity;0.00690669556453377!GO:0005869;dynactin complex;0.00707274732707971!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00746830596528845!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00746830596528845!GO:0008097;5S rRNA binding;0.0074719425195633!GO:0030137;COPI-coated vesicle;0.0074719425195633!GO:0008139;nuclear localization sequence binding;0.00750911980864946!GO:0009892;negative regulation of metabolic process;0.00764768808408742!GO:0030027;lamellipodium;0.00765317597821637!GO:0051098;regulation of binding;0.00790506594661015!GO:0006807;nitrogen compound metabolic process;0.00791551069400331!GO:0030132;clathrin coat of coated pit;0.00802814647651135!GO:0001726;ruffle;0.00818570967151139!GO:0051101;regulation of DNA binding;0.00824600477160566!GO:0008652;amino acid biosynthetic process;0.0082645950763645!GO:0006378;mRNA polyadenylation;0.00827247649558108!GO:0000096;sulfur amino acid metabolic process;0.00880784722430763!GO:0005874;microtubule;0.00890394954645052!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00897520009449759!GO:0000428;DNA-directed RNA polymerase complex;0.00897520009449759!GO:0009308;amine metabolic process;0.00898726104331502!GO:0009303;rRNA transcription;0.00951424991992844!GO:0007264;small GTPase mediated signal transduction;0.00953189798916355!GO:0005669;transcription factor TFIID complex;0.00972134801611882!GO:0044437;vacuolar part;0.00988296855038937!GO:0006595;polyamine metabolic process;0.0100491250558337!GO:0016860;intramolecular oxidoreductase activity;0.0100861932234886!GO:0006007;glucose catabolic process;0.0102845996007857!GO:0006261;DNA-dependent DNA replication;0.0107482566481477!GO:0042802;identical protein binding;0.010851678522776!GO:0003711;transcription elongation regulator activity;0.0108997603351716!GO:0006509;membrane protein ectodomain proteolysis;0.0109097671360912!GO:0033619;membrane protein proteolysis;0.0109097671360912!GO:0016272;prefoldin complex;0.0111879720163181!GO:0001666;response to hypoxia;0.0113798602527938!GO:0007034;vacuolar transport;0.0115053680748554!GO:0007021;tubulin folding;0.0118382518391784!GO:0031970;organelle envelope lumen;0.0120263588982076!GO:0006497;protein amino acid lipidation;0.0122654008510443!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0123310252219614!GO:0005765;lysosomal membrane;0.0124108461906479!GO:0048037;cofactor binding;0.0127046007774266!GO:0008180;signalosome;0.0127076426148199!GO:0046519;sphingoid metabolic process;0.0128448484501798!GO:0030384;phosphoinositide metabolic process;0.012948029471162!GO:0006405;RNA export from nucleus;0.0129747815047841!GO:0051540;metal cluster binding;0.013008010747088!GO:0051536;iron-sulfur cluster binding;0.013008010747088!GO:0042158;lipoprotein biosynthetic process;0.013121755186793!GO:0000786;nucleosome;0.0135499892203748!GO:0005832;chaperonin-containing T-complex;0.0136994976150689!GO:0005684;U2-dependent spliceosome;0.0145009331883188!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0145009331883188!GO:0004667;prostaglandin-D synthase activity;0.0145009331883188!GO:0050802;circadian sleep/wake cycle, sleep;0.0145009331883188!GO:0022410;circadian sleep/wake cycle process;0.0145009331883188!GO:0042749;regulation of circadian sleep/wake cycle;0.0145009331883188!GO:0006778;porphyrin metabolic process;0.0145009331883188!GO:0033013;tetrapyrrole metabolic process;0.0145009331883188!GO:0006643;membrane lipid metabolic process;0.0145009331883188!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0145090411784647!GO:0050681;androgen receptor binding;0.0146519333380661!GO:0006740;NADPH regeneration;0.0146519333380661!GO:0006098;pentose-phosphate shunt;0.0146519333380661!GO:0065009;regulation of a molecular function;0.0147731857475101!GO:0006144;purine base metabolic process;0.0147753408821963!GO:0006672;ceramide metabolic process;0.0148365997453098!GO:0000339;RNA cap binding;0.0152264278356894!GO:0051128;regulation of cellular component organization and biogenesis;0.0153541883344118!GO:0006376;mRNA splice site selection;0.0157701046847932!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0157701046847932!GO:0005758;mitochondrial intermembrane space;0.0163308288975861!GO:0006611;protein export from nucleus;0.0164484241485891!GO:0044438;microbody part;0.0164484241485891!GO:0044439;peroxisomal part;0.0164484241485891!GO:0008022;protein C-terminus binding;0.016983919804351!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0171779578166699!GO:0031369;translation initiation factor binding;0.0172166209585736!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0175449447697563!GO:0017166;vinculin binding;0.0185892525055538!GO:0009112;nucleobase metabolic process;0.0186056436687215!GO:0030134;ER to Golgi transport vesicle;0.0188911239956966!GO:0009116;nucleoside metabolic process;0.0194195815323486!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0196178265417082!GO:0030125;clathrin vesicle coat;0.0202416504701671!GO:0030665;clathrin coated vesicle membrane;0.0202416504701671!GO:0051052;regulation of DNA metabolic process;0.0204731241108503!GO:0005637;nuclear inner membrane;0.0208375183471056!GO:0000178;exosome (RNase complex);0.0210461579451212!GO:0006506;GPI anchor biosynthetic process;0.0212170005883767!GO:0050811;GABA receptor binding;0.021236720723041!GO:0008190;eukaryotic initiation factor 4E binding;0.0222911621764478!GO:0030127;COPII vesicle coat;0.0229008460747399!GO:0012507;ER to Golgi transport vesicle membrane;0.0229008460747399!GO:0031903;microbody membrane;0.0229464001128495!GO:0005778;peroxisomal membrane;0.0229464001128495!GO:0016481;negative regulation of transcription;0.0233049644945362!GO:0016197;endosome transport;0.024312168249703!GO:0000209;protein polyubiquitination;0.0243362170001668!GO:0004527;exonuclease activity;0.0243982242244032!GO:0006302;double-strand break repair;0.0250068574768864!GO:0003923;GPI-anchor transamidase activity;0.0250068574768864!GO:0016255;attachment of GPI anchor to protein;0.0250068574768864!GO:0042765;GPI-anchor transamidase complex;0.0250068574768864!GO:0033673;negative regulation of kinase activity;0.0252561691375476!GO:0006469;negative regulation of protein kinase activity;0.0252561691375476!GO:0005862;muscle thin filament tropomyosin;0.0255272939405065!GO:0009081;branched chain family amino acid metabolic process;0.0258507222115179!GO:0000097;sulfur amino acid biosynthetic process;0.0259900014081216!GO:0005996;monosaccharide metabolic process;0.0264012718752738!GO:0035035;histone acetyltransferase binding;0.02658137201406!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0267136760228826!GO:0015002;heme-copper terminal oxidase activity;0.0267136760228826!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0267136760228826!GO:0004129;cytochrome-c oxidase activity;0.0267136760228826!GO:0045045;secretory pathway;0.0269124379583899!GO:0004532;exoribonuclease activity;0.0271235896316715!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0271235896316715!GO:0008234;cysteine-type peptidase activity;0.0271235896316715!GO:0016615;malate dehydrogenase activity;0.0273049303422861!GO:0006733;oxidoreduction coenzyme metabolic process;0.027533599211426!GO:0030503;regulation of cell redox homeostasis;0.0284540771430048!GO:0006720;isoprenoid metabolic process;0.0291871473649277!GO:0006505;GPI anchor metabolic process;0.0294699085382599!GO:0009451;RNA modification;0.0297270882541915!GO:0016408;C-acyltransferase activity;0.0297363818521465!GO:0006979;response to oxidative stress;0.0298592546764813!GO:0030032;lamellipodium biogenesis;0.030271975257321!GO:0030100;regulation of endocytosis;0.0306605549952248!GO:0031901;early endosome membrane;0.0314837101932513!GO:0006417;regulation of translation;0.0315656011344724!GO:0006644;phospholipid metabolic process;0.0316676234878497!GO:0019318;hexose metabolic process;0.0316676234878497!GO:0030518;steroid hormone receptor signaling pathway;0.0335213102598874!GO:0045947;negative regulation of translational initiation;0.0337616137998668!GO:0006779;porphyrin biosynthetic process;0.0338479154764887!GO:0033014;tetrapyrrole biosynthetic process;0.0338479154764887!GO:0016791;phosphoric monoester hydrolase activity;0.0341229145530376!GO:0042168;heme metabolic process;0.0345176454535389!GO:0006220;pyrimidine nucleotide metabolic process;0.0351248857539917!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0354205198378669!GO:0030145;manganese ion binding;0.0356308139309581!GO:0043631;RNA polyadenylation;0.0356308139309581!GO:0017134;fibroblast growth factor binding;0.0358384483765136!GO:0007041;lysosomal transport;0.0358713608548981!GO:0007004;telomere maintenance via telomerase;0.0374030513378439!GO:0003678;DNA helicase activity;0.0374708875208265!GO:0042769;DNA damage response, detection of DNA damage;0.0374708875208265!GO:0004192;cathepsin D activity;0.0376218042259318!GO:0006400;tRNA modification;0.0377720377344053!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.037898395250807!GO:0006767;water-soluble vitamin metabolic process;0.0380053731246008!GO:0030508;thiol-disulfide exchange intermediate activity;0.0388434401520934!GO:0006984;ER-nuclear signaling pathway;0.0390289993007989!GO:0033559;unsaturated fatty acid metabolic process;0.0392152992257581!GO:0006636;unsaturated fatty acid biosynthetic process;0.0392152992257581!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0398726607837123!GO:0051348;negative regulation of transferase activity;0.0404461031862863!GO:0044255;cellular lipid metabolic process;0.0404724107253027!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0412264887968423!GO:0040008;regulation of growth;0.0414745151887957!GO:0045862;positive regulation of proteolysis;0.0424589331305869!GO:0005819;spindle;0.0424589331305869!GO:0048144;fibroblast proliferation;0.0428009864828754!GO:0048145;regulation of fibroblast proliferation;0.0428009864828754!GO:0030149;sphingolipid catabolic process;0.0430805299671546!GO:0008637;apoptotic mitochondrial changes;0.0437739588615465!GO:0003682;chromatin binding;0.0437739588615465!GO:0005784;translocon complex;0.0439756029070519!GO:0016584;nucleosome positioning;0.0441080077872403!GO:0003702;RNA polymerase II transcription factor activity;0.0441197469760901!GO:0008320;protein transmembrane transporter activity;0.0441725607852359!GO:0022408;negative regulation of cell-cell adhesion;0.04449306005849!GO:0008632;apoptotic program;0.0447664542203707!GO:0006066;alcohol metabolic process;0.045061930624349!GO:0000075;cell cycle checkpoint;0.0452277685412108!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0454670020089602!GO:0007243;protein kinase cascade;0.0467599726005352!GO:0022884;macromolecule transmembrane transporter activity;0.0469882617261435!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0469882617261435!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0469882617261435!GO:0045039;protein import into mitochondrial inner membrane;0.0469882617261435!GO:0008538;proteasome activator activity;0.0470215485079432!GO:0031575;G1/S transition checkpoint;0.0473263723524319!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0473519992345749!GO:0048146;positive regulation of fibroblast proliferation;0.0473519992345749!GO:0015036;disulfide oxidoreductase activity;0.0478972324629217!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0480602975165494!GO:0006739;NADP metabolic process;0.0482921126332039!GO:0006892;post-Golgi vesicle-mediated transport;0.048626849870648!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0486516048366776!GO:0006635;fatty acid beta-oxidation;0.0489277888053499!GO:0005732;small nucleolar ribonucleoprotein complex;0.0489277888053499!GO:0045941;positive regulation of transcription;0.0489277888053499!GO:0006360;transcription from RNA polymerase I promoter;0.0495350799151062!GO:0008287;protein serine/threonine phosphatase complex;0.0498212005048223!GO:0006661;phosphatidylinositol biosynthetic process;0.0498393749086726!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0498398175456913!GO:0031529;ruffle organization and biogenesis;0.049864011728639!GO:0031323;regulation of cellular metabolic process;0.0498870879758183
|sample_id=11689
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=eye
|top_motifs=HOX{A6,A7,B6,B7}:2.3380136313;bHLH_family:2.13861081923;CRX:1.8579068626;MYOD1:1.82739808369;NKX2-1,4:1.41975001485;NANOG:1.33052991749;EN1,2:1.29920994634;NR3C1:1.28025603887;PAX1,9:1.15881046658;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.08086196925;RXR{A,B,G}:1.03822003924;PAX8:1.00635883071;EBF1:0.994424267142;ADNP_IRX_SIX_ZHX:0.972811114742;SREBF1,2:0.950591897996;SOX17:0.944346684071;RFX1:0.931233558205;SMAD1..7,9:0.910599845692;TLX1..3_NFIC{dimer}:0.868306950862;ZNF148:0.839666044379;LHX3,4:0.815143495045;ESRRA:0.79193029875;RBPJ:0.78895763795;HOXA9_MEIS1:0.709554443025;ZEB1:0.684269421289;TEAD1:0.670125489329;TFAP4:0.651654297908;GTF2A1,2:0.648795409825;PAX5:0.586734842498;GLI1..3:0.584518993309;NKX6-1,2:0.579472761231;VSX1,2:0.553099729664;HSF1,2:0.545604779256;ELK1,4_GABP{A,B1}:0.523257505133;JUN:0.510325017175;TFAP2{A,C}:0.482432426832;ZNF143:0.480186484404;EVI1:0.479586332416;ZBTB6:0.478167977608;ARID5B:0.46815223638;NFIL3:0.454632410301;CDC5L:0.453621970549;HES1:0.452490559062;LMO2:0.449207252856;NFE2L1:0.435107023907;STAT5{A,B}:0.427585637683;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.420816893941;NR6A1:0.395675907859;TBP:0.393964779238;PRRX1,2:0.381277388639;PATZ1:0.362654538986;HIF1A:0.330034001534;CEBPA,B_DDIT3:0.325005906935;HAND1,2:0.324079286626;PBX1:0.317795401252;TEF:0.314495424411;T:0.312668321232;SP1:0.294077212026;NRF1:0.273922095444;NKX2-2,8:0.270347152174;MAFB:0.258755792725;MYFfamily:0.255147226632;SNAI1..3:0.254055597837;HNF4A_NR2F1,2:0.244798438588;TP53:0.243693108461;MEF2{A,B,C,D}:0.238878145772;ZNF423:0.223238816836;ALX1:0.219549900714;AIRE:0.216752483161;SOX2:0.206102203595;STAT1,3:0.201234252461;IKZF1:0.18129572246;ZIC1..3:0.180317523508;TAL1_TCF{3,4,12}:0.177588382005;ATF4:0.167447031422;YY1:0.161433675284;FOSL2:0.139659941463;ATF2:0.13698281635;NHLH1,2:0.126688989736;ONECUT1,2:0.0979383139334;AHR_ARNT_ARNT2:0.0886563646502;KLF4:0.0874119435334;GFI1B:0.0865309936148;PDX1:0.0854637609255;GTF2I:0.0788000910387;MTE{core}:0.0697923857037;FOX{D1,D2}:0.0681779891719;HIC1:0.0575956139523;SPZ1:0.0543601470711;MTF1:0.0291414768054;RFX2..5_RFXANK_RFXAP:0.0253687755787;PPARG:0.0230295928032;TFCP2:0.00981568441276;NR5A1,2:0.00726037482316;HLF:0.00392693144911;SOX{8,9,10}:0.00197183445248;UFEwm:0.00196264943297;REST:0.00102322806183;SRF:-0.00387238966186;GFI1:-0.00642180095166;NFIX:-0.00891362414466;SOX5:-0.00972219802868;HNF1A:-0.0200726056333;XBP1:-0.0221181086807;FOS_FOS{B,L1}_JUN{B,D}:-0.0293491290059;ZFP161:-0.0310378270842;E2F1..5:-0.0355014028408;PAX6:-0.0444521858454;BACH2:-0.0460829278575;HOX{A5,B5}:-0.0517751220058;MAZ:-0.0529346383613;FOXL1:-0.0617974421946;RREB1:-0.081494380683;NKX3-1:-0.0928637926317;MYBL2:-0.10747493212;FOX{F1,F2,J1}:-0.10855136914;NFATC1..3:-0.114033923231;POU6F1:-0.115351353579;FOX{I1,J2}:-0.137008716164;GATA6:-0.14578440643;ALX4:-0.146039656135;CUX2:-0.153765729032;NFE2:-0.154377151082;OCT4_SOX2{dimer}:-0.155539741613;FOXM1:-0.161453062754;NR1H4:-0.167882839898;TBX4,5:-0.171363612086;TFAP2B:-0.174619654141;PRDM1:-0.175260996311;RXRA_VDR{dimer}:-0.178921443681;HMGA1,2:-0.223122686917;CDX1,2,4:-0.224868095562;FOXQ1:-0.229495336379;NFY{A,B,C}:-0.235850107789;HOX{A4,D4}:-0.236276298912;FOXN1:-0.239903658809;TFDP1:-0.255046448544;FOXD3:-0.256749528354;HBP1_HMGB_SSRP1_UBTF:-0.267482846902;MYB:-0.271426666779;GCM1,2:-0.286265166751;LEF1_TCF7_TCF7L1,2:-0.300383970704;NFKB1_REL_RELA:-0.31907617412;FOXA2:-0.332581731003;NKX3-2:-0.353313023998;FOXO1,3,4:-0.379929489561;RORA:-0.383953535124;XCPE1{core}:-0.390918330496;AR:-0.405194386334;GZF1:-0.409870075935;POU3F1..4:-0.411526603231;EGR1..3:-0.414225848738;MZF1:-0.417752707325;NKX2-3_NKX2-5:-0.443530452279;FOXP3:-0.443799553489;PAX2:-0.44952739264;MED-1{core}:-0.476528944093;CREB1:-0.481082828996;BPTF:-0.490451135851;RUNX1..3:-0.494027307219;ESR1:-0.515290574277;IKZF2:-0.526006007647;ZNF238:-0.555545491614;ELF1,2,4:-0.572488385299;SPIB:-0.575439573576;ETS1,2:-0.583013457098;PAX4:-0.593581939079;POU1F1:-0.613131996006;HMX1:-0.645151662718;DBP:-0.647281200965;GATA4:-0.647640244447;POU2F1..3:-0.651837780683;NFE2L2:-0.666427691597;SPI1:-0.670259893862;ATF5_CREB3:-0.680715999471;EP300:-0.680869801047;POU5F1:-0.680968799628;STAT2,4,6:-0.687233411232;TOPORS:-0.702235576254;DMAP1_NCOR{1,2}_SMARC:-0.796313194714;TGIF1:-0.803680980767;IRF7:-0.842338627958;FOXP1:-0.876358659372;IRF1,2:-0.916156822185;TLX2:-0.923405154024;PITX1..3:-0.927451853266;BREu{core}:-0.931289050114;PAX3,7:-0.962153780433;ZNF384:-1.02669805313;ZBTB16:-1.04136618715;ATF6:-1.16100010966;NANOG{mouse}:-1.3235861872
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11689-122I6;search_select_hide=table117:FF:11689-122I6
}}
}}

Latest revision as of 18:15, 4 June 2020

Name:Retinal Pigment Epithelial Cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12733
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueeye
dev stageNA
sexNA
ageNA
cell typeretinal pigment epithelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number4143
catalog numberSC6545
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004906
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12733 CAGE DRX008443 DRR009315
Accession ID Hg19

Library idBAMCTSS
CNhs12733 DRZ000740 DRZ002125
Accession ID Hg38

Library idBAMCTSS
CNhs12733 DRZ012090 DRZ013475
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.153
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0696
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0184
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.109
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.324
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.187
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.217
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.13
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0489
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0117
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.154
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.218
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12733

Jaspar motifP-value
MA0002.20.649
MA0003.10.461
MA0004.10.0127
MA0006.10.149
MA0007.10.784
MA0009.10.758
MA0014.10.902
MA0017.10.838
MA0018.20.406
MA0019.10.361
MA0024.10.869
MA0025.10.266
MA0027.10.702
MA0028.10.00523
MA0029.10.568
MA0030.10.359
MA0031.10.849
MA0035.20.285
MA0038.10.5
MA0039.20.48
MA0040.10.446
MA0041.10.413
MA0042.10.721
MA0043.10.392
MA0046.10.263
MA0047.20.498
MA0048.10.607
MA0050.19.66068e-11
MA0051.19.77357e-5
MA0052.10.117
MA0055.10.679
MA0057.10.377
MA0058.10.00688
MA0059.10.00383
MA0060.10.491
MA0061.13.25735e-4
MA0062.20.5
MA0065.20.00536
MA0066.10.31
MA0067.10.578
MA0068.10.236
MA0069.10.949
MA0070.10.0236
MA0071.10.514
MA0072.10.914
MA0073.10.621
MA0074.10.54
MA0076.10.0158
MA0077.10.0193
MA0078.10.296
MA0079.20.688
MA0080.25.11607e-10
MA0081.10.0174
MA0083.10.743
MA0084.10.187
MA0087.10.916
MA0088.10.471
MA0090.13.25768e-5
MA0091.10.182
MA0092.10.978
MA0093.10.0167
MA0099.20.735
MA0100.10.876
MA0101.10.00134
MA0102.20.445
MA0103.10.00567
MA0104.20.0295
MA0105.10.00999
MA0106.10.603
MA0107.13.59864e-4
MA0108.21.66151e-4
MA0111.10.935
MA0112.20.712
MA0113.10.394
MA0114.10.00808
MA0115.10.854
MA0116.10.332
MA0117.10.361
MA0119.10.7
MA0122.10.29
MA0124.10.374
MA0125.10.208
MA0131.10.0618
MA0135.10.694
MA0136.14.04241e-6
MA0137.20.198
MA0138.20.937
MA0139.10.0496
MA0140.10.936
MA0141.10.385
MA0142.10.847
MA0143.10.899
MA0144.10.0128
MA0145.10.0151
MA0146.10.628
MA0147.10.055
MA0148.10.412
MA0149.10.833
MA0150.16.39673e-4
MA0152.10.521
MA0153.10.109
MA0154.10.894
MA0155.10.0498
MA0156.11.76847e-5
MA0157.10.849
MA0159.14.71342e-4
MA0160.10.983
MA0162.10.189
MA0163.10.699
MA0164.10.312
MA0258.10.587
MA0259.10.768



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12733

Novel motifP-value
10.622
100.00906
1000.308
1010.366
1020.723
1030.537
1040.922
1050.545
1060.0535
1070.864
1080.777
1090.123
110.455
1100.552
1110.0919
1120.133
1130.00982
1140.405
1150.284
1160.935
1170.153
1180.293
1190.069
120.696
1200.75
1210.9
1220.149
1235.88927e-4
1240.822
1250.262
1260.333
1270.456
1280.177
1290.782
130.588
1300.117
1310.506
1320.758
1330.98
1340.642
1350.0376
1360.442
1370.605
1380.0133
1390.524
140.502
1400.486
1410.183
1420.598
1430.298
1440.331
1450.963
1460.949
1470.7
1480.131
1490.0329
150.796
1500.269
1510.305
1520.0167
1530.21
1540.269
1550.079
1560.0688
1570.0412
1580.0123
1590.305
160.192
1600.976
1610.606
1620.294
1630.572
1640.351
1650.215
1660.881
1670.215
1680.695
1690.536
170.623
180.717
190.742
20.884
200.152
210.787
220.316
230.299
240.9
250.955
260.0983
270.607
280.49
290.746
30.0999
300.0715
310.774
320.175
330.314
340.718
350.547
360.827
370.14
380.301
390.338
40.985
400.0689
410.0713
420.11
430.242
440.705
450.144
460.192
470.801
480.688
490.225
50.483
500.964
510.712
520.944
530.259
540.425
550.904
560.793
570.9
580.185
590.504
60.814
600.12
610.527
620.232
630.319
640.895
650.442
660.603
670.865
680.94
690.115
70.385
700.672
710.591
720.307
730.0849
740.657
750.845
760.00585
770.362
780.208
790.438
80.713
800.954
810.44
820.4
830.0247
840.289
850.481
860.502
870.265
880.514
890.512
90.929
900.393
910.12
920.531
930.631
940.355
950.00491
960.881
970.371
980.0867
990.113



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12733


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000255 (eukaryotic cell)
0000149 (visual pigment cell)
0002586 (retinal pigment epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000966 (retina)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0005388 (photoreceptor array)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0001781 (layer of retina)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0001782 (pigmented layer of retina)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001802 (posterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000158 (human retinal pigment epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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