FFCP PHASE1:Mm9::chr12:71417306..71417313,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:71417306..71417313,- | |||
|description=CAGE_peak_at_chr12:71417306..71417313,- | |description=CAGE_peak_at_chr12:71417306..71417313,- | ||
|id=chr12:71417306..71417313,- | |id=chr12:71417306..71417313,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.91e-27!63;UBERON:0003056!2.58e-26!49;UBERON:0002346!1.33e-21!71;UBERON:0003075!1.33e-21!71;UBERON:0007284!1.33e-21!71;UBERON:0007811!4.46e-20!86;UBERON:0000153!1.38e-17!94;UBERON:0000955!2.05e-17!50;UBERON:0006238!2.05e-17!50;UBERON:0004121!5.72e-17!102;UBERON:0000924!5.72e-17!102;UBERON:0006601!5.72e-17!102;UBERON:0000970!1.91e-16!9;UBERON:0000019!1.91e-16!9;UBERON:0000047!1.91e-16!9;UBERON:0004088!1.91e-16!9;UBERON:0002104!1.91e-16!9;UBERON:0001456!1.91e-16!9;UBERON:0003072!1.91e-16!9;UBERON:0003071!1.91e-16!9;UBERON:0004128!1.91e-16!9;UBERON:0002616!3.07e-16!49;UBERON:0001049!5.29e-15!52;UBERON:0005068!5.29e-15!52;UBERON:0006241!5.29e-15!52;UBERON:0007135!5.29e-15!52;UBERON:0003080!3.41e-14!40;UBERON:0002020!7.22e-14!34;UBERON:0001017!2.90e-13!73;UBERON:0005743!2.90e-13!73;UBERON:0001444!4.35e-13!11;UBERON:0002780!4.65e-13!39;UBERON:0001890!4.65e-13!39;UBERON:0006240!4.65e-13!39;UBERON:0000073!1.02e-12!75;UBERON:0001016!1.02e-12!75;UBERON:0002021!1.34e-12!10;UBERON:0000411!1.34e-12!10;UBERON:0001950!1.34e-12!10;UBERON:0000020!7.87e-12!12;UBERON:0001032!7.87e-12!12;UBERON:0004456!7.87e-12!12;UBERON:0002791!1.91e-11!29;UBERON:0003528!1.91e-11!29;UBERON:0001893!1.91e-11!29;UBERON:0005085!9.09e-11!13;UBERON:0002619!3.43e-08!17;UBERON:0000956!7.92e-08!21;UBERON:0001869!7.92e-08!21;UBERON:0000203!7.92e-08!21;UBERON:0000475!1.31e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-27,10;UBERON:0000411,1.23e-27,10;UBERON:0001950,1.23e-27,10;UBERON:0002619,2.08e-16,17;UBERON:0000956,2.45e-13,21;UBERON:0001869,2.45e-13,21;UBERON:0000203,2.45e-13,21;UBERON:0003056,5.45e-11,49;UBERON:0002780,3.52e-10,39;UBERON:0001890,3.52e-10,39;UBERON:0006240,3.52e-10,39;UBERON:0003080,6.31e-10,40;UBERON:0000073,6.99e-10,54;UBERON:0003528,1.02e-09,29;UBERON:0002791,1.02e-09,29;UBERON:0001893,1.02e-09,29;UBERON:0002616,1.24e-08,46;UBERON:0000955,1.89e-08,47;UBERON:0006238,1.89e-08,47;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0002020,2.58e-08,34;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0010371,2.40e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001017,2.78e-07,73;UBERON:0001016,4.40e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0.695297280769106,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0.520481771850815,0.919608417733892,0.360124259610698,0.60281927134286,0.680364991513279,0.512454881139399,0.187403449119458,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,5.15605962095457,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0.695297280769106,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0.520481771850815,0.919608417733892,0.360124259610698,0.60281927134286,0.680364991513279,0.512454881139399,0.187403449119458,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,5.15605962095457,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:71417306..71417313,- | |short_description=p@chr12:71417306..71417313,- | ||
}} | }} |
Latest revision as of 04:37, 5 August 2015
Short description: | p@chr12:71417306..71417313, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:71417306..71417313, - |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.23e-27 | 10 |
visual cortex | 1.23e-27 | 10 |
neocortex | 1.23e-27 | 10 |
regional part of cerebral cortex | 2.08e-16 | 17 |
cerebral cortex | 2.45e-13 | 21 |
cerebral hemisphere | 2.45e-13 | 21 |
pallium | 2.45e-13 | 21 |
pre-chordal neural plate | 5.45e-11 | 49 |
regional part of forebrain | 3.52e-10 | 39 |
forebrain | 3.52e-10 | 39 |
future forebrain | 3.52e-10 | 39 |
anterior neural tube | 6.31e-10 | 40 |
regional part of nervous system | 6.99e-10 | 54 |
brain grey matter | 1.02e-09 | 29 |
regional part of telencephalon | 1.02e-09 | 29 |
telencephalon | 1.02e-09 | 29 |
regional part of brain | 1.24e-08 | 46 |
brain | 1.89e-08 | 47 |
future brain | 1.89e-08 | 47 |
neurectoderm | 2.14e-08 | 64 |
neural plate | 2.14e-08 | 64 |
presumptive neural plate | 2.14e-08 | 64 |
gray matter | 2.58e-08 | 34 |
neural tube | 1.23e-07 | 52 |
neural rod | 1.23e-07 | 52 |
future spinal cord | 1.23e-07 | 52 |
neural keel | 1.23e-07 | 52 |
ecto-epithelium | 2.40e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
central nervous system | 2.78e-07 | 73 |
nervous system | 4.40e-07 | 75 |