Personal tools

FFCP PHASE1:Mm9::chr13:13876637..13876681,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14706
|EntrezGene=14706
|HGNC=
|HGNC=
|MCL_coexpression_id=93
|TSSclassifier=NA
|UniProt=P50153
|UniProt=P50153
|association_with_transcript=41bp_to_ENSMUST00000021734_5end
|association_with_transcript=41bp_to_ENSMUST00000021734_5end
|cluster_id=chr13:13876637..13876681,+
|description=CAGE_peak_2_at_Gng4_5end
|description=CAGE_peak_2_at_Gng4_5end
|id=chr13:13876637..13876681,+
|id=chr13:13876637..13876681,+
|ontology_enrichment_celltype=CL:0000540!1.89e-07!33;CL:0000047!1.89e-07!33;CL:0000031!1.89e-07!33;CL:0000404!1.89e-07!33;CL:0000117!3.26e-07!23;CL:0000337!3.26e-07!23
|ontology_enrichment_celltype=CL:0000540!1.89e-07!33;CL:0000047!1.89e-07!33;CL:0000031!1.89e-07!33;CL:0000404!1.89e-07!33;CL:0000117!3.26e-07!23;CL:0000337!3.26e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.50e-07,23;CL:0000337,5.50e-07,23;CL:0000540,6.00e-07,33;CL:0000047,6.00e-07,33;CL:0000031,6.00e-07,33;CL:0000404,6.00e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.83e-22!102;UBERON:0000924!2.83e-22!102;UBERON:0006601!2.83e-22!102;UBERON:0002346!2.58e-18!71;UBERON:0003075!2.58e-18!71;UBERON:0007284!2.58e-18!71;UBERON:0001017!5.43e-18!73;UBERON:0005743!5.43e-18!73;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001049!5.76e-16!52;UBERON:0005068!5.76e-16!52;UBERON:0006241!5.76e-16!52;UBERON:0007135!5.76e-16!52;UBERON:0000955!4.66e-14!50;UBERON:0006238!4.66e-14!50;UBERON:0000033!5.14e-14!63;UBERON:0002616!2.14e-13!49;UBERON:0003056!4.18e-13!49;UBERON:0003080!2.51e-12!40;UBERON:0002780!9.16e-12!39;UBERON:0001890!9.16e-12!39;UBERON:0006240!9.16e-12!39;UBERON:0002020!6.18e-11!34;UBERON:0002791!5.60e-08!29;UBERON:0003528!5.60e-08!29;UBERON:0001893!5.60e-08!29;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10;UBERON:0000153!9.94e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.50e-21,95;UBERON:0000924,1.50e-21,95;UBERON:0006601,1.50e-21,95;UBERON:0001017,3.08e-19,73;UBERON:0001016,9.84e-19,75;UBERON:0000073,1.40e-18,54;UBERON:0010371,2.19e-18,73;UBERON:0001049,7.79e-18,52;UBERON:0005068,7.79e-18,52;UBERON:0006241,7.79e-18,52;UBERON:0007135,7.79e-18,52;UBERON:0002346,2.17e-17,64;UBERON:0003075,2.17e-17,64;UBERON:0007284,2.17e-17,64;UBERON:0000955,3.74e-14,47;UBERON:0006238,3.74e-14,47;UBERON:0002616,2.24e-13,46;UBERON:0003080,2.82e-13,40;UBERON:0003056,5.92e-13,49;UBERON:0002780,1.33e-12,39;UBERON:0001890,1.33e-12,39;UBERON:0006240,1.33e-12,39;UBERON:0002020,4.47e-12,34;UBERON:0010314,1.28e-09,92;UBERON:0003528,1.59e-08,29;UBERON:0002791,1.59e-08,29;UBERON:0001893,1.59e-08,29;UBERON:0002021,4.18e-08,10;UBERON:0000411,4.18e-08,10;UBERON:0001950,4.18e-08,10
|phase1_expression=0,0.348975407639361,0,0,0,2.35030980676646,1.40167584357315,0,0.703943610758334,1.40438715793196,0.171217968225505,0.159544317990673,0,0,0,0,0,0.315462165358238,0,0,2.38121212422995,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,1.33038306393183,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,3.03474691289397,6.34789175126439,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,13.4255962669788,10.8225585066291,0.61245399607477,0.670918297127655,1.83843757322004,3.30347642998166,2.42605942361857,4.76180253094355,2.76961204233407,4.11694396210843,1.56274011167028,6.42120897703176,2.8138130501584,4.27835093775068,15.6153150301044,12.6710795911202,8.94717339961443,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,0.867426633830679,1.52232739156071,1.61430848079241,1.20578112442098,2.4693628498498,1.38233250462643,8.65182387070309,0.722996784599558,0,0,0,0,0,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,0.127070227073065,7.04016005202667,8.23501085073528,10.9319286338192,7.64827008846016,5.11430914660661,9.14267396062064,10.5456820994042,1.01839363850316,0.622034853050465,2.77995034277042,0.420883711772948,0.650602214813519,0.919608417733892,1.0803727788321,2.26057226753573,1.56483948048054,1.7935920839879,2.43624483855295,3.62184719034622,0.215567992932842,0.945530400839096,0.879755620819744,1.09597866213787,2.22437799380478,4.52727816478817,5.55611768301447,0,0,0.51469581422943,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,6.68879980465349,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,2.58643413653496,1.36474860983384,1.79763881730844,1.29682829924817,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.49095073923223,0.442655759869801,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.714130922658041,1.56106918286239,0.472905432318573,0.44292937929755,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.0137647496948,6.09500770279457,0,0.252470927204373,0.631016438832513,1.17131623288992,2.58508077279359,0.716906393857656,1.11399337041197,1.41538265394416,1.61924280669958,2.92255857911312,3.16230222357219,365.984979404438,0.141940085208269,1.42452482933804,0.977321756121456,0,1.32745138339963,2.18502572539483,0.906970670894253,1.32023555829129,2.95301892880773,1.84461088766356,0.775284879504663,1.81766864738753,2.49548164869305,1.26414703174326,0,0,20.0859367394735,0.720244376125241,1.16422815404479,2.14337035031592,4.78818630834139,3.92411398724555,4.60737257685939,12.4830629136986,0.23467170806371,0,0.661585194164886,6.26567761177624,10.4951877352339,4.58378229453985,4.8942661041286,6.72977688954751,0.874442509889552,6.86073617438886,0,0,0,0,0,0,1.86976272993241,1.39951452323658,1.38199973804424,0,0.316335993581135,0.406638934253697,0.86404272657441,0.209088296014469,1.9652630737156,1.75323650300267,3.63675205191478,0.26175594198403,0.518459893167171,4.97071450469541,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0.428736758158132,0,19.2015626489803,17.9526842237799,16.0410743763031,16.6697586873377,8.22099023724771,6.0431511791176,4.72515750162264,5.40385443869065,4.98456649882625,1.55328093525546,0.31136204275253,0,0.512200817262403,3.40349403895612,2.30574478890781,5.33146174505041,2.66696073361938,4.32673620201678,2.24643446714271,2.27427490587418,3.29523089857312,2.64076877940507,3.183811253976,2.68905640100451,3.4461281373368,2.38146845641537,3.59241410429052,2.50781986602817,2.47251540481984,2.50238164228475,1.37147700954166,2.30718548007139,2.62279808942053,1.88950341622027,2.91739079287525,2.70766745253365,2.0122077016005,1.8414879800649,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,0.818462086339379,2.78886314134739,5.20847849649082,7.49431733813838,3.97683734357194,5.58664740525576,1.72159498861959,1.54413993383661,0.463735671240843
|phase1_expression=0,0.348975407639361,0,0,0,2.35030980676646,1.40167584357315,0,0.703943610758334,1.40438715793196,0.171217968225505,0.159544317990673,0,0,0,0,0,0.315462165358238,0,0,2.38121212422995,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,1.33038306393183,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,3.03474691289397,6.34789175126439,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,13.4255962669788,10.8225585066291,0.61245399607477,0.670918297127655,1.83843757322004,3.30347642998166,2.42605942361857,4.76180253094355,2.76961204233407,4.11694396210843,1.56274011167028,6.42120897703176,2.8138130501584,4.27835093775068,15.6153150301044,12.6710795911202,8.94717339961443,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,0.867426633830679,1.52232739156071,1.61430848079241,1.20578112442098,2.4693628498498,1.38233250462643,8.65182387070309,0.722996784599558,0,0,0,0,0,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,0.127070227073065,7.04016005202667,8.23501085073528,10.9319286338192,7.64827008846016,5.11430914660661,9.14267396062064,10.5456820994042,1.01839363850316,0.622034853050465,2.77995034277042,0.420883711772948,0.650602214813519,0.919608417733892,1.0803727788321,2.26057226753573,1.56483948048054,1.7935920839879,2.43624483855295,3.62184719034622,0.215567992932842,0.945530400839096,0.879755620819744,1.09597866213787,2.22437799380478,4.52727816478817,5.55611768301447,0,0,0.51469581422943,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,6.68879980465349,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,2.58643413653496,1.36474860983384,1.79763881730844,1.29682829924817,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.49095073923223,0.442655759869801,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.714130922658041,1.56106918286239,0.472905432318573,0.44292937929755,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.0137647496948,6.09500770279457,0,0.252470927204373,0.631016438832513,1.17131623288992,2.58508077279359,0.716906393857656,1.11399337041197,1.41538265394416,1.61924280669958,2.92255857911312,3.16230222357219,365.984979404438,0.141940085208269,1.42452482933804,0.977321756121456,0,1.32745138339963,2.18502572539483,0.906970670894253,1.32023555829129,2.95301892880773,1.84461088766356,0.775284879504663,1.81766864738753,2.49548164869305,1.26414703174326,0,0,20.0859367394735,0.720244376125241,1.16422815404479,2.14337035031592,4.78818630834139,3.92411398724555,4.60737257685939,12.4830629136986,0.23467170806371,0,0.661585194164886,6.26567761177624,10.4951877352339,4.58378229453985,4.8942661041286,6.72977688954751,0.874442509889552,6.86073617438886,0,0,0,0,0,0,1.86976272993241,1.39951452323658,1.38199973804424,0,0.316335993581135,0.406638934253697,0.86404272657441,0.209088296014469,1.9652630737156,1.75323650300267,3.63675205191478,0.26175594198403,0.518459893167171,4.97071450469541,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0.428736758158132,0,19.2015626489803,17.9526842237799,16.0410743763031,16.6697586873377,8.22099023724771,6.0431511791176,4.72515750162264,5.40385443869065,4.98456649882625,1.55328093525546,0.31136204275253,0,0.512200817262403,3.40349403895612,2.30574478890781,5.33146174505041,2.66696073361938,4.32673620201678,2.24643446714271,2.27427490587418,3.29523089857312,2.64076877940507,3.183811253976,2.68905640100451,3.4461281373368,2.38146845641537,3.59241410429052,2.50781986602817,2.47251540481984,2.50238164228475,1.37147700954166,2.30718548007139,2.62279808942053,1.88950341622027,2.91739079287525,2.70766745253365,2.0122077016005,1.8414879800649,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,0.818462086339379,2.78886314134739,5.20847849649082,7.49431733813838,3.97683734357194,5.58664740525576,1.72159498861959,1.54413993383661,0.463735671240843
|short_description=p2@Gng4
|short_description=p2@Gng4
}}
}}

Latest revision as of 04:39, 27 September 2015

Short description:p2@Gng4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gng4_5end
Coexpression cluster:MCL_coexpression_mm9:93
Association with transcript: 41bp_to_ENSMUST00000021734_5end
EntrezGene:Gng4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gng4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F110.93
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I9365.98
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E912.48
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.50e-0723
neuroblast (sensu Vertebrata)5.50e-0723
neuron6.00e-0733
neuronal stem cell6.00e-0733
neuroblast6.00e-0733
electrically signaling cell6.00e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.50e-2195
ectoderm1.50e-2195
presumptive ectoderm1.50e-2195
central nervous system3.08e-1973
nervous system9.84e-1975
regional part of nervous system1.40e-1854
ecto-epithelium2.19e-1873
neural tube7.79e-1852
neural rod7.79e-1852
future spinal cord7.79e-1852
neural keel7.79e-1852
neurectoderm2.17e-1764
neural plate2.17e-1764
presumptive neural plate2.17e-1764
brain3.74e-1447
future brain3.74e-1447
regional part of brain2.24e-1346
anterior neural tube2.82e-1340
pre-chordal neural plate5.92e-1349
regional part of forebrain1.33e-1239
forebrain1.33e-1239
future forebrain1.33e-1239
gray matter4.47e-1234
structure with developmental contribution from neural crest1.28e-0992
brain grey matter1.59e-0829
regional part of telencephalon1.59e-0829
telencephalon1.59e-0829
occipital lobe4.18e-0810
visual cortex4.18e-0810
neocortex4.18e-0810
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:13876637..13876681,%2B&oldid=4293044"