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FFCP PHASE1:Mm9::chr19:8994951..8994963,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72727
|EntrezGene=72727
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P58158,Q3USF3
|UniProt=P58158,Q3USF3
|association_with_transcript=68bp_to_NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|association_with_transcript=68bp_to_NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|cluster_id=chr19:8994951..8994963,+
|description=CAGE_peak_4_at_B3gat3_5end
|description=CAGE_peak_4_at_B3gat3_5end
|id=chr19:8994951..8994963,+
|id=chr19:8994951..8994963,+
|ontology_enrichment_celltype=CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23;CL:0000221!5.65e-09!44;CL:0000133!5.65e-09!44;CL:0002319!1.02e-08!43;CL:0000055!9.73e-08!50;CL:0000540!9.02e-07!33;CL:0000047!9.02e-07!33;CL:0000031!9.02e-07!33;CL:0000404!9.02e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-16,23;CL:0000337,6.28e-16,23;CL:0000540,3.15e-10,33;CL:0000047,3.15e-10,33;CL:0000031,3.15e-10,33;CL:0000404,3.15e-10,33;CL:0002319,5.74e-10,43;CL:0000393,1.06e-09,39;CL:0000211,1.06e-09,39;CL:0000221,1.15e-09,44;CL:0000133,1.15e-09,44;CL:0002614,3.57e-09,3;CL:0002610,1.31e-08,3;CL:0002321,9.05e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.42e-16!75;UBERON:0001016!5.42e-16!75;UBERON:0001017!4.66e-15!73;UBERON:0005743!4.66e-15!73;UBERON:0000955!1.82e-14!50;UBERON:0006238!1.82e-14!50;UBERON:0001049!3.92e-14!52;UBERON:0005068!3.92e-14!52;UBERON:0006241!3.92e-14!52;UBERON:0007135!3.92e-14!52;UBERON:0002616!5.68e-14!49;UBERON:0002020!2.34e-12!34;UBERON:0000033!3.01e-12!63;UBERON:0004121!9.36e-12!102;UBERON:0000924!9.36e-12!102;UBERON:0006601!9.36e-12!102;UBERON:0002791!4.66e-11!29;UBERON:0003528!4.66e-11!29;UBERON:0001893!4.66e-11!29;UBERON:0002346!6.81e-11!71;UBERON:0003075!6.81e-11!71;UBERON:0007284!6.81e-11!71;UBERON:0003080!4.04e-10!40;UBERON:0002780!1.22e-09!39;UBERON:0001890!1.22e-09!39;UBERON:0006240!1.22e-09!39;UBERON:0003056!5.74e-09!49;UBERON:0007811!9.86e-08!86;UBERON:0000956!1.50e-07!21;UBERON:0001869!1.50e-07!21;UBERON:0000203!1.50e-07!21;UBERON:0000153!8.10e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-17,73;UBERON:0000073,3.15e-17,54;UBERON:0001016,1.00e-16,75;UBERON:0002020,4.07e-15,34;UBERON:0001049,2.74e-14,52;UBERON:0005068,2.74e-14,52;UBERON:0006241,2.74e-14,52;UBERON:0007135,2.74e-14,52;UBERON:0004121,5.75e-12,95;UBERON:0000924,5.75e-12,95;UBERON:0006601,5.75e-12,95;UBERON:0003528,1.09e-11,29;UBERON:0002791,1.09e-11,29;UBERON:0001893,1.09e-11,29;UBERON:0002950,5.91e-11,4;UBERON:0001891,5.91e-11,4;UBERON:0009616,5.91e-11,4;UBERON:0010286,5.91e-11,4;UBERON:0002346,9.34e-11,64;UBERON:0003075,9.34e-11,64;UBERON:0007284,9.34e-11,64;UBERON:0002616,5.47e-10,46;UBERON:0000955,1.06e-09,47;UBERON:0006238,1.06e-09,47;UBERON:0002038,3.57e-09,3;UBERON:0009663,3.57e-09,3;UBERON:0009661,3.57e-09,3;UBERON:0000125,3.57e-09,3;UBERON:0002308,3.57e-09,3;UBERON:0003080,5.28e-09,40;UBERON:0010371,7.03e-09,73;UBERON:0004684,1.31e-08,3;UBERON:0002275,1.31e-08,3;UBERON:0002780,5.54e-08,39;UBERON:0001890,5.54e-08,39;UBERON:0006240,5.54e-08,39;UBERON:0000956,9.95e-08,21;UBERON:0001869,9.95e-08,21;UBERON:0000203,9.95e-08,21;UBERON:0010314,5.07e-07,92;UBERON:0003056,8.23e-07,49;UBERON:0002240,8.27e-07,6;UBERON:0005174,8.27e-07,6;UBERON:0001137,8.27e-07,6
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0,0,0.33575854382378,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0,0.22940928106717,0,1.7230479846363,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0.335565212115473,0,0,0,0,1.54701627683233,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,1.3498495759221,0,0.7104801149461,1.79760066311043,0,1.03689612308478,0.270011876663381,1.26194976810829,1.42825492201902,0.883474163806454,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,4.59674417106676,3.5329502648936,0.527545150920775,0.823388792421687,1.04182674111352,3.90856198601933,2.25105044012672,2.90316670775939,0,1.28134512719193,2.05039390407831,0.832988126665025,0.906858721281426,0,1.72084775396277,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0,0.563373679106722,0,2.54805239706646,0,0.649473123033642,0,2.02209778005913,0.34255163915718,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0.247194967734374,0,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0.599902730993408,0,1.04853447583376,0.457500602818626,0.628271760564322,1.04294592115366,1.53429274398198,0.62336413367868,0.648965052271031,0.203678727700633,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0.852490498186778,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0,0,0.804820204198858,0.467061369468678,0.658239399653922,0.164167464079095,0.56748166682099,0.146199987425332,0.219550115291051,0.805238512562231,1.05144974282064,0.514523061896422,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.252946148497029,0,0.156998727841375,0.370191491765402,0,0,0.393117990226406,0,0,0,0.763877555344259,0,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0,0.325929952884052,0,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,1.28440471990234,1.17211686592203,0,1.00988370881749,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0.963963949265421,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0.18006109403131,0.517434735131018,0.214337035031592,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,1.48340241608408,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.552799895217695,0,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0.506868376472335,0.117357238645754,0.5208175393758,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0,0,0.384847366561318,0.233753804363138,0,0.221985953374065,0.358855426437903,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,1.71853182343688,1.37016503954128,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,2.5888015587591,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.516919220600519,0,0.695305955669133,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0,0,0.33575854382378,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0,0.22940928106717,0,1.7230479846363,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0.335565212115473,0,0,0,0,1.54701627683233,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,1.3498495759221,0,0.7104801149461,1.79760066311043,0,1.03689612308478,0.270011876663381,1.26194976810829,1.42825492201902,0.883474163806454,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,4.59674417106676,3.5329502648936,0.527545150920775,0.823388792421687,1.04182674111352,3.90856198601933,2.25105044012672,2.90316670775939,0,1.28134512719193,2.05039390407831,0.832988126665025,0.906858721281426,0,1.72084775396277,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0,0.563373679106722,0,2.54805239706646,0,0.649473123033642,0,2.02209778005913,0.34255163915718,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0,0,0.247194967734374,0,0.884610551949874,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0.599902730993408,0,1.04853447583376,0.457500602818626,0.628271760564322,1.04294592115366,1.53429274398198,0.62336413367868,0.648965052271031,0.203678727700633,0,0,0.420883711772948,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0.852490498186778,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0,0,0.804820204198858,0.467061369468678,0.658239399653922,0.164167464079095,0.56748166682099,0.146199987425332,0.219550115291051,0.805238512562231,1.05144974282064,0.514523061896422,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.252946148497029,0,0.156998727841375,0.370191491765402,0,0,0.393117990226406,0,0,0,0.763877555344259,0,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0,0.325929952884052,0,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,1.28440471990234,1.17211686592203,0,1.00988370881749,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0.584511715822624,0,0.963963949265421,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0.18006109403131,0.517434735131018,0.214337035031592,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,1.48340241608408,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.552799895217695,0,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0.506868376472335,0.117357238645754,0.5208175393758,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0,0,0,0,0.384847366561318,0.233753804363138,0,0.221985953374065,0.358855426437903,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,1.71853182343688,1.37016503954128,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,2.5888015587591,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.516919220600519,0,0.695305955669133,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p4@B3gat3
|short_description=p4@B3gat3
}}
}}

Latest revision as of 04:52, 26 September 2015

Short description:p4@B3gat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_B3gat3_5end
Coexpression cluster:NA
Association with transcript: 68bp_to_NM_024256, uc008gnz.1, uc008goa.1, uc008gob.1_5end
EntrezGene:B3gat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@B3gat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.41e-1773
regional part of nervous system3.15e-1754
nervous system1.00e-1675
gray matter4.07e-1534
neural tube2.74e-1452
neural rod2.74e-1452
future spinal cord2.74e-1452
neural keel2.74e-1452
ectoderm-derived structure5.75e-1295
ectoderm5.75e-1295
presumptive ectoderm5.75e-1295
brain grey matter1.09e-1129
regional part of telencephalon1.09e-1129
telencephalon1.09e-1129
regional part of midbrain5.91e-114
midbrain5.91e-114
presumptive midbrain5.91e-114
midbrain neural tube5.91e-114
neurectoderm9.34e-1164
neural plate9.34e-1164
presumptive neural plate9.34e-1164
regional part of brain5.47e-1046
brain1.06e-0947
future brain1.06e-0947
substantia nigra3.57e-093
telencephalic nucleus3.57e-093
midbrain nucleus3.57e-093
neural nucleus3.57e-093
nucleus of brain3.57e-093
anterior neural tube5.28e-0940
ecto-epithelium7.03e-0973
raphe nuclei1.31e-083
reticular formation1.31e-083
regional part of forebrain5.54e-0839
forebrain5.54e-0839
future forebrain5.54e-0839
cerebral cortex9.95e-0821
cerebral hemisphere9.95e-0821
pallium9.95e-0821
structure with developmental contribution from neural crest5.07e-0792
pre-chordal neural plate8.23e-0749
spinal cord8.27e-076
dorsal region element8.27e-076
dorsum8.27e-076
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