FFCP PHASE1:Mm9::chr1:146456236..146456244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=370 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000157471_5end | |association_with_transcript=0bp_to_ENSMUST00000157471_5end | ||
|cluster_id=chr1:146456236..146456244,- | |||
|description=CAGE_peak_1_at_ENSMUST00000157471_5end | |description=CAGE_peak_1_at_ENSMUST00000157471_5end | ||
|id=chr1:146456236..146456244,- | |id=chr1:146456236..146456244,- | ||
|ontology_enrichment_celltype=CL:0000144!2.36e-44!121;CL:0000012!2.36e-44!121;CL:0002371!3.78e-44!118;CL:0000548!5.27e-43!115;CL:0000004!5.27e-43!115;CL:0000255!5.27e-43!115;CL:0000034!6.15e-39!97;CL:0000723!7.38e-38!91;CL:0000048!7.38e-38!91;CL:0002321!4.25e-27!70;CL:0000220!4.25e-27!70;CL:0000055!1.80e-22!50;CL:0002319!6.01e-21!43;CL:0000221!6.10e-20!44;CL:0000133!6.10e-20!44;CL:0000219!2.26e-18!54;CL:0000393!2.34e-18!39;CL:0000211!2.34e-18!39;CL:0000540!2.19e-17!33;CL:0000047!2.19e-17!33;CL:0000031!2.19e-17!33;CL:0000404!2.19e-17!33;CL:0000063!3.46e-16!66;CL:0002320!9.11e-16!46;CL:0000134!9.11e-16!46;CL:0000117!5.85e-14!23;CL:0000337!5.85e-14!23;CL:0002031!9.96e-10!25;CL:0000988!1.08e-09!32;CL:0002032!1.08e-09!32;CL:0000037!1.08e-09!32;CL:0000566!1.08e-09!32;CL:0000837!1.08e-09!32;CL:0000839!2.19e-07!13;CL:0000049!5.77e-07!19 | |ontology_enrichment_celltype=CL:0000144!2.36e-44!121;CL:0000012!2.36e-44!121;CL:0002371!3.78e-44!118;CL:0000548!5.27e-43!115;CL:0000004!5.27e-43!115;CL:0000255!5.27e-43!115;CL:0000034!6.15e-39!97;CL:0000723!7.38e-38!91;CL:0000048!7.38e-38!91;CL:0002321!4.25e-27!70;CL:0000220!4.25e-27!70;CL:0000055!1.80e-22!50;CL:0002319!6.01e-21!43;CL:0000221!6.10e-20!44;CL:0000133!6.10e-20!44;CL:0000219!2.26e-18!54;CL:0000393!2.34e-18!39;CL:0000211!2.34e-18!39;CL:0000540!2.19e-17!33;CL:0000047!2.19e-17!33;CL:0000031!2.19e-17!33;CL:0000404!2.19e-17!33;CL:0000063!3.46e-16!66;CL:0002320!9.11e-16!46;CL:0000134!9.11e-16!46;CL:0000117!5.85e-14!23;CL:0000337!5.85e-14!23;CL:0002031!9.96e-10!25;CL:0000988!1.08e-09!32;CL:0002032!1.08e-09!32;CL:0000037!1.08e-09!32;CL:0000566!1.08e-09!32;CL:0000837!1.08e-09!32;CL:0000839!2.19e-07!13;CL:0000049!5.77e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.42e-44,91;CL:0000048,1.42e-44,91;CL:0000034,9.15e-44,97;CL:0002321,2.47e-32,70;CL:0002319,2.55e-27,43;CL:0000221,2.39e-26,44;CL:0000133,2.39e-26,44;CL:0000540,5.40e-24,33;CL:0000047,5.40e-24,33;CL:0000031,5.40e-24,33;CL:0000404,5.40e-24,33;CL:0000393,7.29e-24,39;CL:0000211,7.29e-24,39;CL:0000219,2.73e-19,54;CL:0000117,8.45e-19,23;CL:0000337,8.45e-19,23;CL:0002320,5.39e-17,46;CL:0000134,5.39e-17,46;CL:0002031,3.48e-11,25;CL:0000839,1.15e-09,13;CL:0000988,1.52e-09,32;CL:0002032,1.52e-09,32;CL:0000037,1.52e-09,32;CL:0000837,1.52e-09,32;CL:0000763,3.92e-08,16;CL:0000049,6.89e-08,19;CL:0000107,2.36e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.11e-16!46;UBERON:0000073!5.30e-15!75;UBERON:0001016!5.30e-15!75;UBERON:0001017!5.89e-15!73;UBERON:0005743!5.89e-15!73;UBERON:0002020!5.10e-13!34;UBERON:0002791!1.55e-10!29;UBERON:0003528!1.55e-10!29;UBERON:0001893!1.55e-10!29;UBERON:0000956!4.56e-08!21;UBERON:0001869!4.56e-08!21;UBERON:0000203!4.56e-08!21;UBERON:0004121!4.75e-08!102;UBERON:0000924!4.75e-08!102;UBERON:0006601!4.75e-08!102;UBERON:0002619!1.54e-07!17;UBERON:0002021!2.11e-07!10;UBERON:0000411!2.11e-07!10;UBERON:0001950!2.11e-07!10;UBERON:0001049!2.55e-07!52;UBERON:0005068!2.55e-07!52;UBERON:0006241!2.55e-07!52;UBERON:0007135!2.55e-07!52;UBERON:0002616!3.34e-07!49;UBERON:0000955!8.75e-07!50;UBERON:0006238!8.75e-07!50;UBERON:0002780!9.02e-07!39;UBERON:0001890!9.02e-07!39;UBERON:0006240!9.02e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.82e-21,73;UBERON:0001016,2.08e-20,75;UBERON:0002020,3.82e-18,34;UBERON:0002384,5.39e-17,46;UBERON:0003528,1.16e-14,29;UBERON:0002791,1.16e-14,29;UBERON:0001893,1.16e-14,29;UBERON:0004121,3.80e-13,95;UBERON:0000924,3.80e-13,95;UBERON:0006601,3.80e-13,95;UBERON:0000073,1.32e-12,54;UBERON:0000956,1.24e-11,21;UBERON:0001869,1.24e-11,21;UBERON:0000203,1.24e-11,21;UBERON:0002619,1.35e-10,17;UBERON:0001049,4.05e-10,52;UBERON:0005068,4.05e-10,52;UBERON:0006241,4.05e-10,52;UBERON:0007135,4.05e-10,52;UBERON:0002021,1.10e-09,10;UBERON:0000411,1.10e-09,10;UBERON:0001950,1.10e-09,10;UBERON:0002346,3.54e-09,64;UBERON:0003075,3.54e-09,64;UBERON:0007284,3.54e-09,64;UBERON:0002780,9.78e-09,39;UBERON:0001890,9.78e-09,39;UBERON:0006240,9.78e-09,39;UBERON:0003080,2.54e-08,40;UBERON:0002371,4.73e-08,16;UBERON:0002616,7.44e-08,46;UBERON:0000955,1.63e-07,47;UBERON:0006238,1.63e-07,47;UBERON:0002410,2.36e-07,9;UBERON:0010371,9.47e-07,73 | |||
|phase1_expression=0,0,1.81999695755814,1.51232105653415,3.00537437967808,0.33575854382378,0.934450562382103,2.84071311571468,2.67498572088167,1.87251621057595,1.54096171402954,1.27635454392538,2.73921167889929,2.44777126773193,18.3210368998615,1.21485160433896,11.8925519281785,2.20823515750766,2.87940310572051,9.33657233955666,0,1.88652807281682,0.522399578277871,0,0,1.14846392823004,0,0,1.52018735565099,0.504060259519861,0.221730510655305,127.006134691926,44.8997294936736,95.0890086092632,0.577703239502549,1.32987716286794,1.22501613757421,1.25559489221072,1.5626706890476,1.57057123192139,0.588231488031014,2.04913645487534,0.971020706062307,0.251793635951155,0.304130793658544,0,50.8554373826225,3.05235218932625,17.3552084360233,11.0825042472342,4.89952475688769,15.8127820801469,0.335565212115473,1.45072428402269,2.35265659399725,36.5308399171045,71.9198934246279,72.1940929188419,28.9312539029225,133.305726776552,25.3532561402472,13.2149367506962,16.8966011261116,30.1466405289269,171.073880724087,115.808258736214,34.1544125990981,26.8952813725088,6.32506635081714,39.0167161778586,23.3460707100034,32.8498632064374,31.8050698970323,28.5403562170843,25.8782771749238,25.7381260250806,157.465709829126,34.8586432972562,33.0254046500923,45.2369966914565,23.7867873366265,25.0038417867245,51.0904888172527,28.138130501584,73.4959571806457,30.3467443037878,11.2473627831291,17.7079473534036,0.37863096666592,0.151143120213571,1.73918693221007,5.16254326188832,17.6792546764015,52.3512095888683,37.6870322119648,40.3224198387602,0.140444420131752,0.170430322578058,2.59786004602869,2.47337702157238,0,1.28326477414318,2.54805239706646,14.2213340630666,4.5463118612355,6.33399663687746,4.54972000513305,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,1.55759661857696,1.19980546198682,0.381210681219194,0,0,0.251308704225729,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,2.06911893990126,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,2.69645822596266,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,70.871903451458,20.1245103012923,0.491764273019036,0,0,0.234423373184406,0,0,15.1443945319803,17.1793047490521,41.5767157624302,22.941004603445,32.0830090678648,30.5722653251939,19.02610297872,16.9508397588561,28.4607200121497,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0,0,0,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0.192423683280659,0,0,1.99787358036658,1.52513556236109,1.67884616364078,0,0,0,0,0,31.0613513439387,24.3972375348804,28.6447756719698,20.2786755165551,56.1767666211927,109.532115121507,46.5765525159946,49.08501115144,43.9548136714678,36.2432218226274,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,1.81999695755814,1.51232105653415,3.00537437967808,0.33575854382378,0.934450562382103,2.84071311571468,2.67498572088167,1.87251621057595,1.54096171402954,1.27635454392538,2.73921167889929,2.44777126773193,18.3210368998615,1.21485160433896,11.8925519281785,2.20823515750766,2.87940310572051,9.33657233955666,0,1.88652807281682,0.522399578277871,0,0,1.14846392823004,0,0,1.52018735565099,0.504060259519861,0.221730510655305,127.006134691926,44.8997294936736,95.0890086092632,0.577703239502549,1.32987716286794,1.22501613757421,1.25559489221072,1.5626706890476,1.57057123192139,0.588231488031014,2.04913645487534,0.971020706062307,0.251793635951155,0.304130793658544,0,50.8554373826225,3.05235218932625,17.3552084360233,11.0825042472342,4.89952475688769,15.8127820801469,0.335565212115473,1.45072428402269,2.35265659399725,36.5308399171045,71.9198934246279,72.1940929188419,28.9312539029225,133.305726776552,25.3532561402472,13.2149367506962,16.8966011261116,30.1466405289269,171.073880724087,115.808258736214,34.1544125990981,26.8952813725088,6.32506635081714,39.0167161778586,23.3460707100034,32.8498632064374,31.8050698970323,28.5403562170843,25.8782771749238,25.7381260250806,157.465709829126,34.8586432972562,33.0254046500923,45.2369966914565,23.7867873366265,25.0038417867245,51.0904888172527,28.138130501584,73.4959571806457,30.3467443037878,11.2473627831291,17.7079473534036,0.37863096666592,0.151143120213571,1.73918693221007,5.16254326188832,17.6792546764015,52.3512095888683,37.6870322119648,40.3224198387602,0.140444420131752,0.170430322578058,2.59786004602869,2.47337702157238,0,1.28326477414318,2.54805239706646,14.2213340630666,4.5463118612355,6.33399663687746,4.54972000513305,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,1.55759661857696,1.19980546198682,0.381210681219194,0,0,0.251308704225729,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,2.06911893990126,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,2.69645822596266,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.947457058852424,0,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,70.871903451458,20.1245103012923,0.491764273019036,0,0,0.234423373184406,0,0,15.1443945319803,17.1793047490521,41.5767157624302,22.941004603445,32.0830090678648,30.5722653251939,19.02610297872,16.9508397588561,28.4607200121497,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0,0,0,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0,0,0.192423683280659,0,0,1.99787358036658,1.52513556236109,1.67884616364078,0,0,0,0,0,31.0613513439387,24.3972375348804,28.6447756719698,20.2786755165551,56.1767666211927,109.532115121507,46.5765525159946,49.08501115144,43.9548136714678,36.2432218226274,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000157471 | |short_description=p1@ENSMUST00000157471 | ||
}} | }} |
Latest revision as of 23:04, 4 August 2015
Short description: | p1@ENSMUST00000157471 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157471_5end |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | 0bp_to_ENSMUST00000157471_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.42e-44 | 91 |
multi fate stem cell | 1.42e-44 | 91 |
stem cell | 9.15e-44 | 97 |
embryonic cell | 2.47e-32 | 70 |
neural cell | 2.55e-27 | 43 |
ectodermal cell | 2.39e-26 | 44 |
neurectodermal cell | 2.39e-26 | 44 |
neuron | 5.40e-24 | 33 |
neuronal stem cell | 5.40e-24 | 33 |
neuroblast | 5.40e-24 | 33 |
electrically signaling cell | 5.40e-24 | 33 |
electrically responsive cell | 7.29e-24 | 39 |
electrically active cell | 7.29e-24 | 39 |
motile cell | 2.73e-19 | 54 |
CNS neuron (sensu Vertebrata) | 8.45e-19 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-19 | 23 |
connective tissue cell | 5.39e-17 | 46 |
mesenchymal cell | 5.39e-17 | 46 |
hematopoietic lineage restricted progenitor cell | 3.48e-11 | 25 |
myeloid lineage restricted progenitor cell | 1.15e-09 | 13 |
hematopoietic cell | 1.52e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.52e-09 | 32 |
hematopoietic stem cell | 1.52e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.52e-09 | 32 |
myeloid cell | 3.92e-08 | 16 |
common myeloid progenitor | 6.89e-08 | 19 |
autonomic neuron | 2.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.82e-21 | 73 |
nervous system | 2.08e-20 | 75 |
gray matter | 3.82e-18 | 34 |
connective tissue | 5.39e-17 | 46 |
brain grey matter | 1.16e-14 | 29 |
regional part of telencephalon | 1.16e-14 | 29 |
telencephalon | 1.16e-14 | 29 |
ectoderm-derived structure | 3.80e-13 | 95 |
ectoderm | 3.80e-13 | 95 |
presumptive ectoderm | 3.80e-13 | 95 |
regional part of nervous system | 1.32e-12 | 54 |
cerebral cortex | 1.24e-11 | 21 |
cerebral hemisphere | 1.24e-11 | 21 |
pallium | 1.24e-11 | 21 |
regional part of cerebral cortex | 1.35e-10 | 17 |
neural tube | 4.05e-10 | 52 |
neural rod | 4.05e-10 | 52 |
future spinal cord | 4.05e-10 | 52 |
neural keel | 4.05e-10 | 52 |
occipital lobe | 1.10e-09 | 10 |
visual cortex | 1.10e-09 | 10 |
neocortex | 1.10e-09 | 10 |
neurectoderm | 3.54e-09 | 64 |
neural plate | 3.54e-09 | 64 |
presumptive neural plate | 3.54e-09 | 64 |
regional part of forebrain | 9.78e-09 | 39 |
forebrain | 9.78e-09 | 39 |
future forebrain | 9.78e-09 | 39 |
anterior neural tube | 2.54e-08 | 40 |
bone marrow | 4.73e-08 | 16 |
regional part of brain | 7.44e-08 | 46 |
brain | 1.63e-07 | 47 |
future brain | 1.63e-07 | 47 |
autonomic nervous system | 2.36e-07 | 9 |
ecto-epithelium | 9.47e-07 | 73 |