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FFCP PHASE1:Mm9::chr4:116550032..116550058,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74464
|EntrezGene=74464
|HGNC=
|HGNC=
|MCL_coexpression_id=295
|TSSclassifier=NA
|UniProt=A2AGE6,Q80TC6
|UniProt=A2AGE6,Q80TC6
|association_with_transcript=25bp_to_NM_001029912,uc008uhq.1_5end
|association_with_transcript=25bp_to_NM_001029912,uc008uhq.1_5end
|cluster_id=chr4:116550032..116550058,+
|description=CAGE_peak_1_at_Zswim5_5end
|description=CAGE_peak_1_at_Zswim5_5end
|id=chr4:116550032..116550058,+
|id=chr4:116550032..116550058,+
|ontology_enrichment_celltype=CL:0000540!2.44e-13!33;CL:0000047!2.44e-13!33;CL:0000031!2.44e-13!33;CL:0000404!2.44e-13!33;CL:0000117!5.88e-12!23;CL:0000337!5.88e-12!23;CL:0000221!6.37e-09!44;CL:0000133!6.37e-09!44;CL:0002319!1.64e-08!43;CL:0000393!2.68e-08!39;CL:0000211!2.68e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,3.10e-15,33;CL:0000047,3.10e-15,33;CL:0000031,3.10e-15,33;CL:0000404,3.10e-15,33;CL:0000117,1.78e-13,23;CL:0000337,1.78e-13,23;CL:0000393,6.62e-11,39;CL:0000211,6.62e-11,39;CL:0000221,2.92e-09,44;CL:0000133,2.92e-09,44;CL:0002319,8.73e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.66e-20!71;UBERON:0003075!1.66e-20!71;UBERON:0007284!1.66e-20!71;UBERON:0001017!2.50e-19!73;UBERON:0005743!2.50e-19!73;UBERON:0000073!8.34e-19!75;UBERON:0001016!8.34e-19!75;UBERON:0000033!1.96e-18!63;UBERON:0003056!7.13e-18!49;UBERON:0004121!1.23e-17!102;UBERON:0000924!1.23e-17!102;UBERON:0006601!1.23e-17!102;UBERON:0001049!1.60e-15!52;UBERON:0005068!1.60e-15!52;UBERON:0006241!1.60e-15!52;UBERON:0007135!1.60e-15!52;UBERON:0000955!1.37e-14!50;UBERON:0006238!1.37e-14!50;UBERON:0002616!5.59e-14!49;UBERON:0003080!2.77e-13!40;UBERON:0002780!4.75e-13!39;UBERON:0001890!4.75e-13!39;UBERON:0006240!4.75e-13!39;UBERON:0002020!5.42e-11!34;UBERON:0002791!5.57e-09!29;UBERON:0003528!5.57e-09!29;UBERON:0001893!5.57e-09!29;UBERON:0007811!2.64e-08!86;UBERON:0000153!2.51e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.93e-23,64;UBERON:0003075,2.93e-23,64;UBERON:0007284,2.93e-23,64;UBERON:0001017,2.59e-21,73;UBERON:0004121,1.21e-20,95;UBERON:0000924,1.21e-20,95;UBERON:0006601,1.21e-20,95;UBERON:0001016,4.40e-20,75;UBERON:0010371,8.77e-20,73;UBERON:0003056,1.10e-19,49;UBERON:0000073,6.79e-18,54;UBERON:0001049,3.80e-17,52;UBERON:0005068,3.80e-17,52;UBERON:0006241,3.80e-17,52;UBERON:0007135,3.80e-17,52;UBERON:0000955,5.78e-15,47;UBERON:0006238,5.78e-15,47;UBERON:0002616,2.99e-14,46;UBERON:0003080,3.18e-14,40;UBERON:0002780,6.13e-14,39;UBERON:0001890,6.13e-14,39;UBERON:0006240,6.13e-14,39;UBERON:0010314,2.27e-13,92;UBERON:0002020,1.70e-11,34;UBERON:0003528,3.99e-09,29;UBERON:0002791,3.99e-09,29;UBERON:0001893,3.99e-09,29
|phase1_expression=3.68342348341026,6.63053274514786,5.45999087267443,10.5862473957391,9.5170188689806,1.34303417529512,0.467225281191051,0,1.12630977721333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0.47997726838022,1.14704640533585,5.16808767703518,1.29228598847722,1.50829862880122,1.71021077510736,1.51218077855958,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0.725362142011344,0.672187598284928,0,0,0,11.5320382689971,12.6957835025288,8.87363964908651,0,0,0,0,0,0.299600110518405,0.384218305321555,11.8206158031665,9.72042755988173,9.88527318351495,1.71390590642282,2.65042249141936,18.1286382838132,21.3735400370667,16.5459381589804,4.40463523997555,1.40456071893706,2.30409799884365,16.7495585417346,14.9124859071928,15.106487746146,0.837548997004143,1.68828783009504,1.83357897332172,3.83017161115768,4.41352210477219,11.3703661953433,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,4.50698943285378,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,1.90833859442749,1.52232739156071,0.691846491768175,0.753613202763113,1.17588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,3.22058876712702,3.35114730901528,2.29911349687732,0,0,0,1.79748767285787,5.03250663100489,15.2041766056566,1.73824320192276,1.79000820131231,2.70124457927428,3.56930778749067,0.712875546952214,0.497627882440372,1.26361379216837,1.05220927943237,8.32770834961304,7.81667155073808,6.84236093260327,7.53524089178575,8.70867189136997,8.45550553880009,9.27647073141315,5.69147415625834,1.5089759505299,0.945530400839096,1.58356011747554,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,8.23236899034275,5.94753809370836,1.32225283331772,0.853153002140936,1.39342003116263,1.28867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.39269530428806,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.22190796707189,1.55161989734101,1.1221731182451,1.51767689098217,1.62371162777562,1.72698600625512,1.35736880313981,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,1.76605648986571,1.40654023910644,0,0.252470927204373,1.57754109708128,1.17131623288992,1.72338718186239,1.19484398976276,1.11399337041197,2.83076530788832,1.21443210502468,2.33804686329049,3.16230222357219,10.2822821254978,0.709700426041343,2.31485284767432,2.11753047159649,0,0,0.728341908464944,1.51161778482376,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,2.04263763452273,7.38250485528372,6.59729287292048,5.35842587578981,6.0295679438373,4.63758925765383,3.1264313914403,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.7488850197791,2.03967832211561,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,1.42351197111511,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.518459893167171,0,1.69107881605257,0.448549638131936,0.165458490457098,2.33341426012857,2.45403664607689,1.35164900392623,1.29092962510329,3.25510962109875,8.91304427618542,5.55643477899814,2.88030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,3.42541259885321,0.755393897389701,3.37511250115903,3.60256962579376,1.35942722695261,1.03552062350364,5.50072942196136,7.98049746802062,6.82934423016537,2.91728060481953,2.30574478890781,2.02227859295016,2.00022055021454,1.85431551515005,0.64183841918363,1.26348605881899,2.78827229879264,2.82939512079114,1.591905626988,1.6646539625266,2.12511235135769,1.42888107384922,2.0859178670074,1.35036454324594,0.412085900803307,2.20798380201596,2.05721551431249,1.4198064492747,2.38436189947321,1.16277133305863,1.59985946706062,1.77690676572521,1.82927972872773,1.8414879800649,1.22223702461276,2.24456908663095,2.49133538060766,0.985044823755635,2.04615521584845,1.70430525304563,0.578719832943424,4.99621155875892,1.63752125911786,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843
|phase1_expression=3.68342348341026,6.63053274514786,5.45999087267443,10.5862473957391,9.5170188689806,1.34303417529512,0.467225281191051,0,1.12630977721333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0.47997726838022,1.14704640533585,5.16808767703518,1.29228598847722,1.50829862880122,1.71021077510736,1.51218077855958,0.665191531965914,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0.279972843250725,0,0,0.725362142011344,0.672187598284928,0,0,0,11.5320382689971,12.6957835025288,8.87363964908651,0,0,0,0,0,0.299600110518405,0.384218305321555,11.8206158031665,9.72042755988173,9.88527318351495,1.71390590642282,2.65042249141936,18.1286382838132,21.3735400370667,16.5459381589804,4.40463523997555,1.40456071893706,2.30409799884365,16.7495585417346,14.9124859071928,15.106487746146,0.837548997004143,1.68828783009504,1.83357897332172,3.83017161115768,4.41352210477219,11.3703661953433,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,4.50698943285378,0,0,0,0,0,0,1.1418387971906,0,0.593768556259299,1.90833859442749,1.52232739156071,0.691846491768175,0.753613202763113,1.17588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,3.22058876712702,3.35114730901528,2.29911349687732,0,0,0,1.79748767285787,5.03250663100489,15.2041766056566,1.73824320192276,1.79000820131231,2.70124457927428,3.56930778749067,0.712875546952214,0.497627882440372,1.26361379216837,1.05220927943237,8.32770834961304,7.81667155073808,6.84236093260327,7.53524089178575,8.70867189136997,8.45550553880009,9.27647073141315,5.69147415625834,1.5089759505299,0.945530400839096,1.58356011747554,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,3.15434922846191,8.23236899034275,5.94753809370836,1.32225283331772,0.853153002140936,1.39342003116263,1.28867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.39269530428806,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.22190796707189,1.55161989734101,1.1221731182451,1.51767689098217,1.62371162777562,1.72698600625512,1.35736880313981,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,0.221464689648775,0.637819074629948,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,1.76605648986571,1.40654023910644,0,0.252470927204373,1.57754109708128,1.17131623288992,1.72338718186239,1.19484398976276,1.11399337041197,2.83076530788832,1.21443210502468,2.33804686329049,3.16230222357219,10.2822821254978,0.709700426041343,2.31485284767432,2.11753047159649,0,0,0.728341908464944,1.51161778482376,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,2.04263763452273,7.38250485528372,6.59729287292048,5.35842587578981,6.0295679438373,4.63758925765383,3.1264313914403,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,1.7488850197791,2.03967832211561,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,1.42351197111511,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.518459893167171,0,1.69107881605257,0.448549638131936,0.165458490457098,2.33341426012857,2.45403664607689,1.35164900392623,1.29092962510329,3.25510962109875,8.91304427618542,5.55643477899814,2.88030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0.572895513439397,1.03111909406213,3.42541259885321,0.755393897389701,3.37511250115903,3.60256962579376,1.35942722695261,1.03552062350364,5.50072942196136,7.98049746802062,6.82934423016537,2.91728060481953,2.30574478890781,2.02227859295016,2.00022055021454,1.85431551515005,0.64183841918363,1.26348605881899,2.78827229879264,2.82939512079114,1.591905626988,1.6646539625266,2.12511235135769,1.42888107384922,2.0859178670074,1.35036454324594,0.412085900803307,2.20798380201596,2.05721551431249,1.4198064492747,2.38436189947321,1.16277133305863,1.59985946706062,1.77690676572521,1.82927972872773,1.8414879800649,1.22223702461276,2.24456908663095,2.49133538060766,0.985044823755635,2.04615521584845,1.70430525304563,0.578719832943424,4.99621155875892,1.63752125911786,0.6446131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|short_description=p1@Zswim5
|short_description=p1@Zswim5
}}
}}

Latest revision as of 05:25, 26 September 2015

Short description:p1@Zswim5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zswim5_5end
Coexpression cluster:MCL_coexpression_mm9:295
Association with transcript: 25bp_to_NM_001029912, uc008uhq.1_5end
EntrezGene:Zswim5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zswim5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.82
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C68.33
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C68.71
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G89.28
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.10e-1533
neuronal stem cell3.10e-1533
neuroblast3.10e-1533
electrically signaling cell3.10e-1533
CNS neuron (sensu Vertebrata)1.78e-1323
neuroblast (sensu Vertebrata)1.78e-1323
electrically responsive cell6.62e-1139
electrically active cell6.62e-1139
ectodermal cell2.92e-0944
neurectodermal cell2.92e-0944
neural cell8.73e-0943

Uber anatomy
Ontology termp-valuen
neurectoderm2.93e-2364
neural plate2.93e-2364
presumptive neural plate2.93e-2364
central nervous system2.59e-2173
ectoderm-derived structure1.21e-2095
ectoderm1.21e-2095
presumptive ectoderm1.21e-2095
nervous system4.40e-2075
ecto-epithelium8.77e-2073
pre-chordal neural plate1.10e-1949
regional part of nervous system6.79e-1854
neural tube3.80e-1752
neural rod3.80e-1752
future spinal cord3.80e-1752
neural keel3.80e-1752
brain5.78e-1547
future brain5.78e-1547
regional part of brain2.99e-1446
anterior neural tube3.18e-1440
regional part of forebrain6.13e-1439
forebrain6.13e-1439
future forebrain6.13e-1439
structure with developmental contribution from neural crest2.27e-1392
gray matter1.70e-1134
brain grey matter3.99e-0929
regional part of telencephalon3.99e-0929
telencephalon3.99e-0929
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