FF:10442-106F1: Difference between revisions
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.15240904871242e-251!GO:0043231;intracellular membrane-bound organelle;5.32256639896968e-206!GO:0043227;membrane-bound organelle;5.7585167916784e-206!GO:0043226;organelle;6.27689816164122e-204!GO:0043229;intracellular organelle;1.58372458243015e-203!GO:0005737;cytoplasm;2.82404740655265e-177!GO:0044422;organelle part;8.11823849539702e-147!GO:0044446;intracellular organelle part;3.32744217334085e-145!GO:0044444;cytoplasmic part;2.26679076715609e-125!GO:0032991;macromolecular complex;8.0081702255153e-100!GO:0044238;primary metabolic process;4.40570374581173e-98!GO:0044237;cellular metabolic process;1.15935076958169e-97!GO:0043170;macromolecule metabolic process;2.09688963945666e-93!GO:0005634;nucleus;6.7637391440751e-93!GO:0030529;ribonucleoprotein complex;5.18797746434094e-91!GO:0044428;nuclear part;4.56789887118238e-86!GO:0043233;organelle lumen;1.9068133510214e-80!GO:0031974;membrane-enclosed lumen;1.9068133510214e-80!GO:0003723;RNA binding;3.84288228180601e-79!GO:0005515;protein binding;5.34337355804619e-69!GO:0005739;mitochondrion;2.97211475025549e-64!GO:0006396;RNA processing;1.72932994466818e-57!GO:0043283;biopolymer metabolic process;4.77532266118015e-56!GO:0006412;translation;9.77610484646209e-53!GO:0005840;ribosome;1.43616153898191e-52!GO:0010467;gene expression;7.52674111147397e-52!GO:0031981;nuclear lumen;1.20027603932119e-51!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.18732705361619e-51!GO:0016043;cellular component organization and biogenesis;8.57851848144044e-51!GO:0033036;macromolecule localization;1.36853633001012e-50!GO:0015031;protein transport;7.95106513660022e-50!GO:0019538;protein metabolic process;1.05520370346401e-49!GO:0043234;protein complex;3.81574337751826e-49!GO:0031090;organelle membrane;1.444033392228e-47!GO:0008104;protein localization;3.12084700618019e-46!GO:0045184;establishment of protein localization;7.48921128097697e-46!GO:0003735;structural constituent of ribosome;1.18985362001662e-45!GO:0044260;cellular macromolecule metabolic process;6.75348215446111e-45!GO:0044267;cellular protein metabolic process;3.59530604994768e-44!GO:0016071;mRNA metabolic process;7.52748737183883e-42!GO:0044429;mitochondrial part;9.51685821294227e-42!GO:0033279;ribosomal subunit;7.03029748333058e-40!GO:0005829;cytosol;7.58312090955544e-40!GO:0008380;RNA splicing;6.24542367693497e-39!GO:0031967;organelle envelope;1.08938737910373e-38!GO:0009058;biosynthetic process;1.19337549153906e-38!GO:0031975;envelope;2.6370431280374e-38!GO:0044249;cellular biosynthetic process;6.02753533585794e-38!GO:0046907;intracellular transport;5.23990741427632e-37!GO:0009059;macromolecule biosynthetic process;5.23990741427632e-37!GO:0006996;organelle organization and biogenesis;1.58477974042913e-36!GO:0006397;mRNA processing;2.30355630271944e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.11784764189908e-34!GO:0043228;non-membrane-bound organelle;2.66033732420352e-34!GO:0043232;intracellular non-membrane-bound organelle;2.66033732420352e-34!GO:0065003;macromolecular complex assembly;4.12772482432848e-33!GO:0003676;nucleic acid binding;8.02714806109565e-33!GO:0006259;DNA metabolic process;7.17664050354339e-32!GO:0006886;intracellular protein transport;1.6274209049925e-31!GO:0005654;nucleoplasm;2.04129993324842e-31!GO:0022607;cellular component assembly;2.84932234233909e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.49410561090914e-29!GO:0000166;nucleotide binding;9.84764529038032e-28!GO:0005681;spliceosome;1.08669835906145e-27!GO:0005740;mitochondrial envelope;2.45193835733713e-25!GO:0051649;establishment of cellular localization;5.77942633663106e-25!GO:0044445;cytosolic part;6.49713128838997e-25!GO:0016070;RNA metabolic process;6.49713128838997e-25!GO:0051641;cellular localization;9.44365847196675e-25!GO:0044451;nucleoplasm part;1.37019022942041e-24!GO:0007049;cell cycle;1.75986274495241e-24!GO:0019866;organelle inner membrane;6.42701872568848e-24!GO:0031966;mitochondrial membrane;1.05581535423478e-23!GO:0016462;pyrophosphatase activity;1.1399553767233e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.30764210536364e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.84259589714539e-22!GO:0017111;nucleoside-triphosphatase activity;2.27029750647109e-22!GO:0016874;ligase activity;2.8714716467405e-22!GO:0005743;mitochondrial inner membrane;1.10520063550719e-21!GO:0005730;nucleolus;1.78640121182258e-21!GO:0006119;oxidative phosphorylation;2.23925504872023e-21!GO:0015935;small ribosomal subunit;2.99672461927923e-21!GO:0006512;ubiquitin cycle;3.45693947514075e-20!GO:0044265;cellular macromolecule catabolic process;5.91704694069566e-20!GO:0048770;pigment granule;7.75657054319267e-20!GO:0042470;melanosome;7.75657054319267e-20!GO:0031980;mitochondrial lumen;8.11591784760294e-20!GO:0005759;mitochondrial matrix;8.11591784760294e-20!GO:0015934;large ribosomal subunit;9.94307789663141e-20!GO:0006974;response to DNA damage stimulus;1.08602160418371e-19!GO:0006457;protein folding;1.5285610374486e-19!GO:0022618;protein-RNA complex assembly;2.19002466532295e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;2.8132426629929e-19!GO:0043285;biopolymer catabolic process;3.18230849362914e-19!GO:0019941;modification-dependent protein catabolic process;4.90933569212002e-19!GO:0043632;modification-dependent macromolecule catabolic process;4.90933569212002e-19!GO:0006511;ubiquitin-dependent protein catabolic process;5.11859396468246e-19!GO:0017076;purine nucleotide binding;5.11859396468246e-19!GO:0012505;endomembrane system;7.28269787774172e-19!GO:0044257;cellular protein catabolic process;9.15130200463171e-19!GO:0032553;ribonucleotide binding;1.02932872587488e-18!GO:0032555;purine ribonucleotide binding;1.02932872587488e-18!GO:0022402;cell cycle process;1.90578647346612e-18!GO:0009057;macromolecule catabolic process;6.18787042610203e-18!GO:0008134;transcription factor binding;1.26882666225172e-17!GO:0008135;translation factor activity, nucleic acid binding;1.78706063866611e-17!GO:0006281;DNA repair;3.53818392293658e-17!GO:0044455;mitochondrial membrane part;4.09249436086804e-17!GO:0030163;protein catabolic process;5.03276187573723e-17!GO:0000502;proteasome complex (sensu Eukaryota);7.78153936540532e-17!GO:0042254;ribosome biogenesis and assembly;2.60846845105801e-16!GO:0005694;chromosome;3.62152918337356e-16!GO:0006605;protein targeting;5.09415910300218e-16!GO:0051186;cofactor metabolic process;1.1293775108511e-15!GO:0000278;mitotic cell cycle;1.60153817197214e-15!GO:0044248;cellular catabolic process;4.71374864686711e-15!GO:0005761;mitochondrial ribosome;6.37972201898002e-15!GO:0000313;organellar ribosome;6.37972201898002e-15!GO:0016192;vesicle-mediated transport;6.83549430748938e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.17714055371741e-15!GO:0005524;ATP binding;9.27524532822645e-15!GO:0030554;adenyl nucleotide binding;2.16028713464699e-14!GO:0032559;adenyl ribonucleotide binding;3.28701289431522e-14!GO:0005783;endoplasmic reticulum;3.94946075753424e-14!GO:0005635;nuclear envelope;4.03191112572422e-14!GO:0005746;mitochondrial respiratory chain;4.05245817819211e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.60708314845766e-14!GO:0044427;chromosomal part;5.98293234166692e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.01394916463236e-14!GO:0051276;chromosome organization and biogenesis;7.23941420992664e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.94452161369084e-14!GO:0000375;RNA splicing, via transesterification reactions;9.94452161369084e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.94452161369084e-14!GO:0003743;translation initiation factor activity;1.26881000248163e-13!GO:0051082;unfolded protein binding;2.18993498231814e-13!GO:0044432;endoplasmic reticulum part;2.60857583142338e-13!GO:0031965;nuclear membrane;3.76386561352624e-13!GO:0009719;response to endogenous stimulus;3.78912325157265e-13!GO:0043412;biopolymer modification;6.38200850575545e-13!GO:0016604;nuclear body;6.75409127115534e-13!GO:0044453;nuclear membrane part;7.20839328758561e-13!GO:0048193;Golgi vesicle transport;8.11490583411825e-13!GO:0050136;NADH dehydrogenase (quinone) activity;9.61044105973372e-13!GO:0003954;NADH dehydrogenase activity;9.61044105973372e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.61044105973372e-13!GO:0006732;coenzyme metabolic process;2.03781767832443e-12!GO:0006399;tRNA metabolic process;2.83153454969491e-12!GO:0006413;translational initiation;3.91262999628094e-12!GO:0051301;cell division;4.79307178399683e-12!GO:0006260;DNA replication;4.84001915895935e-12!GO:0008639;small protein conjugating enzyme activity;5.37413044984503e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.60473868546629e-12!GO:0004386;helicase activity;8.61441860151146e-12!GO:0003712;transcription cofactor activity;1.13686197953243e-11!GO:0022403;cell cycle phase;1.16479551277961e-11!GO:0004842;ubiquitin-protein ligase activity;1.18453774819826e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.8471174968224e-11!GO:0005794;Golgi apparatus;1.90300054951324e-11!GO:0006913;nucleocytoplasmic transport;1.94817399805142e-11!GO:0016887;ATPase activity;1.96852799152629e-11!GO:0019787;small conjugating protein ligase activity;2.06796485781049e-11!GO:0009259;ribonucleotide metabolic process;2.17333448061388e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.39394090186296e-11!GO:0042773;ATP synthesis coupled electron transport;2.39394090186296e-11!GO:0006446;regulation of translational initiation;2.51872175003825e-11!GO:0000087;M phase of mitotic cell cycle;2.62913726427254e-11!GO:0006163;purine nucleotide metabolic process;3.29955708499142e-11!GO:0051169;nuclear transport;3.92078758334419e-11!GO:0042623;ATPase activity, coupled;3.9759029533953e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.5922219370193e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.5922219370193e-11!GO:0045271;respiratory chain complex I;4.5922219370193e-11!GO:0005747;mitochondrial respiratory chain complex I;4.5922219370193e-11!GO:0007067;mitosis;5.10017498140725e-11!GO:0006464;protein modification process;6.13539939102241e-11!GO:0006364;rRNA processing;6.7780049204641e-11!GO:0012501;programmed cell death;7.73096888231247e-11!GO:0005768;endosome;8.33126583735754e-11!GO:0009150;purine ribonucleotide metabolic process;9.12087042455376e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;1.02467868282929e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.20278190502392e-10!GO:0006915;apoptosis;1.41628966439618e-10!GO:0051726;regulation of cell cycle;1.45512277318321e-10!GO:0016072;rRNA metabolic process;1.47100068488231e-10!GO:0008026;ATP-dependent helicase activity;1.61230093206674e-10!GO:0005643;nuclear pore;1.77178528974955e-10!GO:0000074;regulation of progression through cell cycle;1.81250744516555e-10!GO:0006164;purine nucleotide biosynthetic process;2.1247302029227e-10!GO:0016607;nuclear speck;2.13194534259465e-10!GO:0016881;acid-amino acid ligase activity;2.34086839796691e-10!GO:0050794;regulation of cellular process;2.95207614144195e-10!GO:0006323;DNA packaging;3.52421486675997e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.82041168997336e-10!GO:0043687;post-translational protein modification;5.23833804499625e-10!GO:0008565;protein transporter activity;5.3942128383327e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.80591150286134e-10!GO:0050657;nucleic acid transport;5.96038591923294e-10!GO:0051236;establishment of RNA localization;5.96038591923294e-10!GO:0050658;RNA transport;5.96038591923294e-10!GO:0006403;RNA localization;6.09371345214806e-10!GO:0009260;ribonucleotide biosynthetic process;6.35961591495121e-10!GO:0009055;electron carrier activity;7.25869716034676e-10!GO:0005793;ER-Golgi intermediate compartment;7.34384607055379e-10!GO:0008219;cell death;7.45403424033611e-10!GO:0016265;death;7.45403424033611e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.36953877067725e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.36953877067725e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.36953877067725e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.24618991626039e-10!GO:0009199;ribonucleoside triphosphate metabolic process;9.74775693388549e-10!GO:0000279;M phase;1.09665102590888e-09!GO:0005789;endoplasmic reticulum membrane;1.29610238700439e-09!GO:0006461;protein complex assembly;1.3350544388344e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.60813358586673e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.60813358586673e-09!GO:0009141;nucleoside triphosphate metabolic process;1.79883452303172e-09!GO:0043038;amino acid activation;2.26018236945755e-09!GO:0006418;tRNA aminoacylation for protein translation;2.26018236945755e-09!GO:0043039;tRNA aminoacylation;2.26018236945755e-09!GO:0065002;intracellular protein transport across a membrane;2.30083535900669e-09!GO:0015986;ATP synthesis coupled proton transport;2.34795703016635e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.34795703016635e-09!GO:0006366;transcription from RNA polymerase II promoter;2.76058265954245e-09!GO:0046034;ATP metabolic process;5.34277756820113e-09!GO:0051188;cofactor biosynthetic process;7.45421960129572e-09!GO:0019829;cation-transporting ATPase activity;8.14685609124848e-09!GO:0043566;structure-specific DNA binding;8.21358591636503e-09!GO:0017038;protein import;8.37986784808063e-09!GO:0003924;GTPase activity;8.88994651952933e-09!GO:0046930;pore complex;1.041545929203e-08!GO:0015630;microtubule cytoskeleton;1.09145636213845e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.10692448118451e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.10692448118451e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.15824633404578e-08!GO:0009056;catabolic process;1.22420907709483e-08!GO:0048523;negative regulation of cellular process;1.75191851588123e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.83603536872856e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.83603536872856e-08!GO:0065004;protein-DNA complex assembly;2.56719355983743e-08!GO:0003697;single-stranded DNA binding;2.76666448603409e-08!GO:0044440;endosomal part;2.84821217072023e-08!GO:0010008;endosome membrane;2.84821217072023e-08!GO:0005813;centrosome;4.0383617394046e-08!GO:0051028;mRNA transport;4.15449797460256e-08!GO:0032446;protein modification by small protein conjugation;4.48812795251206e-08!GO:0006754;ATP biosynthetic process;5.25123689437937e-08!GO:0006753;nucleoside phosphate metabolic process;5.25123689437937e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.41250134221676e-08!GO:0009060;aerobic respiration;6.53765507028565e-08!GO:0016567;protein ubiquitination;7.31342702769478e-08!GO:0051246;regulation of protein metabolic process;7.83299400403643e-08!GO:0016469;proton-transporting two-sector ATPase complex;8.10975433862031e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.60894445266087e-08!GO:0005773;vacuole;9.96711058103447e-08!GO:0005770;late endosome;1.05324230078252e-07!GO:0005525;GTP binding;1.0643716362973e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.16870628523518e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.51009793867328e-07!GO:0005815;microtubule organizing center;1.51530515802057e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.56631113926731e-07!GO:0009108;coenzyme biosynthetic process;1.64771791056873e-07!GO:0006333;chromatin assembly or disassembly;1.66289445573799e-07!GO:0045333;cellular respiration;1.66913466516111e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.21158737825966e-07!GO:0043067;regulation of programmed cell death;2.59612227436595e-07!GO:0042981;regulation of apoptosis;2.64655235609537e-07!GO:0005667;transcription factor complex;2.84795018818952e-07!GO:0003713;transcription coactivator activity;2.94603515852154e-07!GO:0000785;chromatin;2.97735319339575e-07!GO:0009117;nucleotide metabolic process;3.54201157096707e-07!GO:0048519;negative regulation of biological process;3.84848663808342e-07!GO:0016779;nucleotidyltransferase activity;5.27966860818141e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.71065840109247e-07!GO:0016563;transcription activator activity;6.90607718721553e-07!GO:0000245;spliceosome assembly;8.18258802730183e-07!GO:0007005;mitochondrion organization and biogenesis;8.3319907859115e-07!GO:0019222;regulation of metabolic process;9.97061157996753e-07!GO:0000323;lytic vacuole;1.2540272288631e-06!GO:0005764;lysosome;1.2540272288631e-06!GO:0016787;hydrolase activity;1.32826329508316e-06!GO:0048475;coated membrane;1.61875616573952e-06!GO:0030117;membrane coat;1.61875616573952e-06!GO:0000151;ubiquitin ligase complex;1.86489849873723e-06!GO:0016568;chromatin modification;2.03648015511705e-06!GO:0032561;guanyl ribonucleotide binding;2.32603935955259e-06!GO:0019001;guanyl nucleotide binding;2.32603935955259e-06!GO:0050789;regulation of biological process;2.46511504816496e-06!GO:0043069;negative regulation of programmed cell death;2.63134821838065e-06!GO:0006099;tricarboxylic acid cycle;2.95302123701541e-06!GO:0046356;acetyl-CoA catabolic process;2.95302123701541e-06!GO:0006752;group transfer coenzyme metabolic process;3.12739214584629e-06!GO:0051170;nuclear import;3.31797640977128e-06!GO:0004298;threonine endopeptidase activity;3.31995185553619e-06!GO:0030120;vesicle coat;3.35865803517585e-06!GO:0030662;coated vesicle membrane;3.35865803517585e-06!GO:0003724;RNA helicase activity;3.71613460724742e-06!GO:0016740;transferase activity;4.47091422859878e-06!GO:0051427;hormone receptor binding;4.78903266577447e-06!GO:0031252;leading edge;5.393733459014e-06!GO:0043066;negative regulation of apoptosis;5.61112028835944e-06!GO:0006916;anti-apoptosis;5.66620488108674e-06!GO:0006084;acetyl-CoA metabolic process;6.88136739670785e-06!GO:0045259;proton-transporting ATP synthase complex;7.22201709175927e-06!GO:0006606;protein import into nucleus;7.38163533877077e-06!GO:0005769;early endosome;7.38163533877077e-06!GO:0006613;cotranslational protein targeting to membrane;7.79756259589173e-06!GO:0045786;negative regulation of progression through cell cycle;8.02252782303258e-06!GO:0051187;cofactor catabolic process;8.99910586309802e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.04889759771632e-05!GO:0035257;nuclear hormone receptor binding;1.07947336639337e-05!GO:0019899;enzyme binding;1.24387609989408e-05!GO:0006261;DNA-dependent DNA replication;1.32971707066443e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.37271753094313e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.48022802425142e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.50063616825771e-05!GO:0009109;coenzyme catabolic process;1.56761641349275e-05!GO:0008654;phospholipid biosynthetic process;1.60179616542908e-05!GO:0043623;cellular protein complex assembly;1.66636711763237e-05!GO:0005819;spindle;1.72126434424632e-05!GO:0031988;membrane-bound vesicle;1.75795083377051e-05!GO:0006334;nucleosome assembly;2.16291647807285e-05!GO:0000314;organellar small ribosomal subunit;2.18939273193735e-05!GO:0005763;mitochondrial small ribosomal subunit;2.18939273193735e-05!GO:0031324;negative regulation of cellular metabolic process;2.41981709764581e-05!GO:0044431;Golgi apparatus part;2.41981709764581e-05!GO:0031497;chromatin assembly;2.6170131153285e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.64384641625665e-05!GO:0005788;endoplasmic reticulum lumen;3.24065376492449e-05!GO:0016363;nuclear matrix;3.47203513648604e-05!GO:0016564;transcription repressor activity;3.55301031577672e-05!GO:0005762;mitochondrial large ribosomal subunit;3.58757482056215e-05!GO:0000315;organellar large ribosomal subunit;3.58757482056215e-05!GO:0003690;double-stranded DNA binding;4.25291019476213e-05!GO:0003714;transcription corepressor activity;4.93713318416168e-05!GO:0030036;actin cytoskeleton organization and biogenesis;6.04019121144171e-05!GO:0051329;interphase of mitotic cell cycle;6.19281038650564e-05!GO:0016491;oxidoreductase activity;6.19642265599851e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.21723520466158e-05!GO:0016853;isomerase activity;6.55402133099682e-05!GO:0003899;DNA-directed RNA polymerase activity;7.65802615878865e-05!GO:0008186;RNA-dependent ATPase activity;8.24454017769648e-05!GO:0031982;vesicle;8.7592273217243e-05!GO:0009892;negative regulation of metabolic process;9.9692141238574e-05!GO:0051168;nuclear export;9.97061182356254e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000103564167071351!GO:0006793;phosphorus metabolic process;0.000112449296965963!GO:0006796;phosphate metabolic process;0.000112449296965963!GO:0005798;Golgi-associated vesicle;0.000115405524603188!GO:0005657;replication fork;0.000129091863024491!GO:0031410;cytoplasmic vesicle;0.000138174945704512!GO:0043021;ribonucleoprotein binding;0.000140413178258874!GO:0000775;chromosome, pericentric region;0.000151738373485224!GO:0008033;tRNA processing;0.000153605553687025!GO:0044452;nucleolar part;0.000156917942701107!GO:0015980;energy derivation by oxidation of organic compounds;0.000168686362449146!GO:0006091;generation of precursor metabolites and energy;0.000173217925308018!GO:0031323;regulation of cellular metabolic process;0.000175239707282645!GO:0030867;rough endoplasmic reticulum membrane;0.000183084226231222!GO:0051325;interphase;0.000200143513814103!GO:0019843;rRNA binding;0.000203626231039659!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000230225308326899!GO:0007051;spindle organization and biogenesis;0.000236889582964357!GO:0004004;ATP-dependent RNA helicase activity;0.000239844692285565!GO:0006612;protein targeting to membrane;0.000254889948682978!GO:0019867;outer membrane;0.00030934245361159!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000318788868498916!GO:0007010;cytoskeleton organization and biogenesis;0.000318788868498916!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000319300536349191!GO:0005048;signal sequence binding;0.000332919573283572!GO:0005885;Arp2/3 protein complex;0.000333047614328738!GO:0009165;nucleotide biosynthetic process;0.000333184743683972!GO:0006350;transcription;0.000348834706028981!GO:0006626;protein targeting to mitochondrion;0.000415084198907594!GO:0016197;endosome transport;0.000423471291288722!GO:0016310;phosphorylation;0.000428569923080414!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000439791539503777!GO:0016859;cis-trans isomerase activity;0.000441565611315521!GO:0030029;actin filament-based process;0.000454725473735786!GO:0006402;mRNA catabolic process;0.000454725473735786!GO:0031968;organelle outer membrane;0.000454725473735786!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000458287934675846!GO:0000049;tRNA binding;0.00048030368091669!GO:0000139;Golgi membrane;0.000498414495435915!GO:0006302;double-strand break repair;0.00052636579560868!GO:0045454;cell redox homeostasis;0.000540765635898986!GO:0007264;small GTPase mediated signal transduction;0.000546169782414517!GO:0003729;mRNA binding;0.00055113826900734!GO:0043681;protein import into mitochondrion;0.000594082308848068!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000596885095078762!GO:0033116;ER-Golgi intermediate compartment membrane;0.000603546408532133!GO:0031072;heat shock protein binding;0.000605790019369306!GO:0000776;kinetochore;0.000644187132510544!GO:0046474;glycerophospholipid biosynthetic process;0.000651356573183958!GO:0042802;identical protein binding;0.000655748624694492!GO:0006352;transcription initiation;0.000685899003744368!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000716706452458888!GO:0000075;cell cycle checkpoint;0.000730583279034975!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000735510512853597!GO:0050662;coenzyme binding;0.000757373323298753!GO:0000059;protein import into nucleus, docking;0.000787276896368667!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000790137832017502!GO:0015992;proton transport;0.000918906821004471!GO:0006414;translational elongation;0.000996897097548878!GO:0016481;negative regulation of transcription;0.000999882360837683!GO:0016251;general RNA polymerase II transcription factor activity;0.00101341852895868!GO:0008250;oligosaccharyl transferase complex;0.00102252955707922!GO:0016044;membrane organization and biogenesis;0.00105389343652725!GO:0035258;steroid hormone receptor binding;0.00105389343652725!GO:0007006;mitochondrial membrane organization and biogenesis;0.00111265439831258!GO:0006289;nucleotide-excision repair;0.00112386769045581!GO:0008168;methyltransferase activity;0.00116548098768239!GO:0016741;transferase activity, transferring one-carbon groups;0.00119146321206909!GO:0006818;hydrogen transport;0.00121097417430559!GO:0005905;coated pit;0.00121097417430559!GO:0006383;transcription from RNA polymerase III promoter;0.00122584913625264!GO:0051920;peroxiredoxin activity;0.00125252266120305!GO:0005774;vacuolar membrane;0.00128982993779746!GO:0006839;mitochondrial transport;0.00133783007404723!GO:0006891;intra-Golgi vesicle-mediated transport;0.00140473411435216!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00141552926085068!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00141874095206823!GO:0051540;metal cluster binding;0.00146875138754348!GO:0051536;iron-sulfur cluster binding;0.00146875138754348!GO:0007059;chromosome segregation;0.0015712891708198!GO:0008094;DNA-dependent ATPase activity;0.00157378944189994!GO:0003684;damaged DNA binding;0.00161575574719349!GO:0030663;COPI coated vesicle membrane;0.00167468481456479!GO:0030126;COPI vesicle coat;0.00167468481456479!GO:0010468;regulation of gene expression;0.00168208542577844!GO:0003678;DNA helicase activity;0.00169380131915245!GO:0007243;protein kinase cascade;0.00173953531170009!GO:0030521;androgen receptor signaling pathway;0.00174636184965478!GO:0048500;signal recognition particle;0.00174960451258979!GO:0051087;chaperone binding;0.00177041167765481!GO:0001726;ruffle;0.00177303751841985!GO:0005741;mitochondrial outer membrane;0.00181490384465182!GO:0004576;oligosaccharyl transferase activity;0.00196470224550243!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00207005158113697!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00207005158113697!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00207005158113697!GO:0031902;late endosome membrane;0.00209198023407411!GO:0048487;beta-tubulin binding;0.00213074043168365!GO:0046467;membrane lipid biosynthetic process;0.00220705811916587!GO:0032508;DNA duplex unwinding;0.00222777513262269!GO:0032392;DNA geometric change;0.00222777513262269!GO:0051252;regulation of RNA metabolic process;0.00228201201607478!GO:0000082;G1/S transition of mitotic cell cycle;0.00229311727038234!GO:0006650;glycerophospholipid metabolic process;0.00237337099539215!GO:0051789;response to protein stimulus;0.00239842620509749!GO:0006986;response to unfolded protein;0.00239842620509749!GO:0048471;perinuclear region of cytoplasm;0.00241079904365574!GO:0046489;phosphoinositide biosynthetic process;0.00251165342606002!GO:0065007;biological regulation;0.00258160948862325!GO:0018196;peptidyl-asparagine modification;0.00274166896430594!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00274166896430594!GO:0015631;tubulin binding;0.00275545144498048!GO:0007040;lysosome organization and biogenesis;0.00279574300577387!GO:0048522;positive regulation of cellular process;0.00296715552051465!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00297243087318015!GO:0030137;COPI-coated vesicle;0.00321643138825215!GO:0008361;regulation of cell size;0.00325269270999867!GO:0007033;vacuole organization and biogenesis;0.00330821089898049!GO:0008312;7S RNA binding;0.00341442074066377!GO:0006401;RNA catabolic process;0.00344963264630436!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00366011378117214!GO:0044437;vacuolar part;0.00366011378117214!GO:0005684;U2-dependent spliceosome;0.00368369391369818!GO:0048037;cofactor binding;0.00399936626526253!GO:0032200;telomere organization and biogenesis;0.0040637777576474!GO:0000723;telomere maintenance;0.0040637777576474!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00409043482078372!GO:0045047;protein targeting to ER;0.00409043482078372!GO:0006310;DNA recombination;0.00416994688861775!GO:0016126;sterol biosynthetic process;0.00431210717661057!GO:0051287;NAD binding;0.00431321120134652!GO:0008139;nuclear localization sequence binding;0.00433931369605153!GO:0031901;early endosome membrane;0.00441358874839293!GO:0005637;nuclear inner membrane;0.0045005490810281!GO:0051539;4 iron, 4 sulfur cluster binding;0.00454166349562758!GO:0003682;chromatin binding;0.00464339844988927!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00466716076219729!GO:0000228;nuclear chromosome;0.00466716076219729!GO:0007052;mitotic spindle organization and biogenesis;0.0047291811043251!GO:0045893;positive regulation of transcription, DNA-dependent;0.00496753609060484!GO:0006284;base-excision repair;0.00500226754767726!GO:0004177;aminopeptidase activity;0.00512269235105644!GO:0005765;lysosomal membrane;0.00536122958246231!GO:0000209;protein polyubiquitination;0.00541056939011155!GO:0016272;prefoldin complex;0.00552579978713031!GO:0033673;negative regulation of kinase activity;0.00562856009920107!GO:0006469;negative regulation of protein kinase activity;0.00562856009920107!GO:0032984;macromolecular complex disassembly;0.00569208702562352!GO:0006405;RNA export from nucleus;0.00576080919657116!GO:0022890;inorganic cation transmembrane transporter activity;0.00576080919657116!GO:0007093;mitotic cell cycle checkpoint;0.00576080919657116!GO:0043284;biopolymer biosynthetic process;0.00579649535524732!GO:0005874;microtubule;0.00582928446493014!GO:0005791;rough endoplasmic reticulum;0.00623000220188292!GO:0000910;cytokinesis;0.0062837358219351!GO:0030133;transport vesicle;0.00629061222117388!GO:0016049;cell growth;0.00656714288509693!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00666243458912738!GO:0015399;primary active transmembrane transporter activity;0.00666243458912738!GO:0003711;transcription elongation regulator activity;0.0067259127512335!GO:0030176;integral to endoplasmic reticulum membrane;0.00674036668193309!GO:0044262;cellular carbohydrate metabolic process;0.00705440493228989!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00714757419740328!GO:0006268;DNA unwinding during replication;0.00718233014528487!GO:0017166;vinculin binding;0.00722139124014095!GO:0051052;regulation of DNA metabolic process;0.00731847630691711!GO:0050681;androgen receptor binding;0.00732316616931462!GO:0006595;polyamine metabolic process;0.00744183474443626!GO:0030118;clathrin coat;0.00756544298540943!GO:0051348;negative regulation of transferase activity;0.00762705242128359!GO:0004527;exonuclease activity;0.00771006610900811!GO:0043022;ribosome binding;0.00779296153635593!GO:0008022;protein C-terminus binding;0.00780264020477974!GO:0043624;cellular protein complex disassembly;0.00785330629296481!GO:0003746;translation elongation factor activity;0.00813758115143949!GO:0045045;secretory pathway;0.00813758115143949!GO:0030518;steroid hormone receptor signaling pathway;0.00818048609996004!GO:0006497;protein amino acid lipidation;0.00834266567774814!GO:0030384;phosphoinositide metabolic process;0.00850917855306537!GO:0030027;lamellipodium;0.00902163554875923!GO:0007004;telomere maintenance via telomerase;0.00913854536544608!GO:0008180;signalosome;0.00920756013642981!GO:0009116;nucleoside metabolic process;0.00923478385764197!GO:0006376;mRNA splice site selection;0.00929051258646483!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00929051258646483!GO:0008632;apoptotic program;0.00929051258646483!GO:0045941;positive regulation of transcription;0.00930036964698624!GO:0007050;cell cycle arrest;0.00930036964698624!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0095251823414628!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0095251823414628!GO:0032774;RNA biosynthetic process;0.00965230184352449!GO:0046519;sphingoid metabolic process;0.00968793534990881!GO:0022411;cellular component disassembly;0.00970419991551158!GO:0006417;regulation of translation;0.00983260736667914!GO:0000781;chromosome, telomeric region;0.00983260736667914!GO:0046483;heterocycle metabolic process;0.00993683175683223!GO:0043488;regulation of mRNA stability;0.0101515043619695!GO:0043487;regulation of RNA stability;0.0101515043619695!GO:0006611;protein export from nucleus;0.0104241974204276!GO:0007088;regulation of mitosis;0.0107223261440008!GO:0006984;ER-nuclear signaling pathway;0.0107991141855152!GO:0008047;enzyme activator activity;0.0107991141855152!GO:0043241;protein complex disassembly;0.0108024374504254!GO:0005832;chaperonin-containing T-complex;0.0108117001685281!GO:0047485;protein N-terminus binding;0.0111598025296955!GO:0008234;cysteine-type peptidase activity;0.0114072702653383!GO:0006351;transcription, DNA-dependent;0.0116938857358315!GO:0030041;actin filament polymerization;0.0119451500109433!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0119962049130033!GO:0031625;ubiquitin protein ligase binding;0.0122021808362268!GO:0007034;vacuolar transport;0.0122021808362268!GO:0000786;nucleosome;0.0122451314173844!GO:0000922;spindle pole;0.0122940405809709!GO:0031529;ruffle organization and biogenesis;0.0129434254555929!GO:0030880;RNA polymerase complex;0.0135978718877358!GO:0065009;regulation of a molecular function;0.0136514229173017!GO:0008097;5S rRNA binding;0.0138196292627201!GO:0005862;muscle thin filament tropomyosin;0.013837419077941!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0139570760144033!GO:0000096;sulfur amino acid metabolic process;0.0141551411624489!GO:0005869;dynactin complex;0.0142406943152368!GO:0006338;chromatin remodeling;0.014332946862267!GO:0009451;RNA modification;0.0148601132282639!GO:0030984;kininogen binding;0.0149229037723881!GO:0004213;cathepsin B activity;0.0149229037723881!GO:0006672;ceramide metabolic process;0.0149614431682497!GO:0043065;positive regulation of apoptosis;0.0149614431682497!GO:0016584;nucleosome positioning;0.0151502882210104!GO:0003702;RNA polymerase II transcription factor activity;0.0151564142941956!GO:0022415;viral reproductive process;0.0155580632868445!GO:0004674;protein serine/threonine kinase activity;0.0155590326421645!GO:0006354;RNA elongation;0.0158886144938911!GO:0030032;lamellipodium biogenesis;0.0168081526142774!GO:0005758;mitochondrial intermembrane space;0.0168755529643198!GO:0000339;RNA cap binding;0.017808969787357!GO:0001558;regulation of cell growth;0.017979118505336!GO:0000792;heterochromatin;0.018054776956975!GO:0030132;clathrin coat of coated pit;0.0180760742607797!GO:0006950;response to stress;0.0182363039178249!GO:0005096;GTPase activator activity;0.0184617288074092!GO:0042158;lipoprotein biosynthetic process;0.0188320814604365!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0197118172155278!GO:0006643;membrane lipid metabolic process;0.0199044731970949!GO:0006278;RNA-dependent DNA replication;0.0199980561686566!GO:0044454;nuclear chromosome part;0.0200672650629041!GO:0006740;NADPH regeneration;0.0201227978826378!GO:0006098;pentose-phosphate shunt;0.0201227978826378!GO:0043068;positive regulation of programmed cell death;0.0202053075723596!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.020271970398884!GO:0006220;pyrimidine nucleotide metabolic process;0.020281608293015!GO:0046966;thyroid hormone receptor binding;0.020388362834939!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0216730553148318!GO:0000428;DNA-directed RNA polymerase complex;0.0216730553148318!GO:0006892;post-Golgi vesicle-mediated transport;0.0230612057340963!GO:0016408;C-acyltransferase activity;0.0231604730372709!GO:0007021;tubulin folding;0.0232153176023157!GO:0005669;transcription factor TFIID complex;0.0233253810822481!GO:0045449;regulation of transcription;0.0236694858970621!GO:0006607;NLS-bearing substrate import into nucleus;0.0239599027578281!GO:0042026;protein refolding;0.0242566960249102!GO:0006007;glucose catabolic process;0.0242566960249102!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0243164510479294!GO:0007030;Golgi organization and biogenesis;0.024463021186293!GO:0042147;retrograde transport, endosome to Golgi;0.0245624194787486!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0248456324257545!GO:0019783;small conjugating protein-specific protease activity;0.0251766638968803!GO:0000118;histone deacetylase complex;0.025377679780901!GO:0004563;beta-N-acetylhexosaminidase activity;0.025377679780901!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0254402304497947!GO:0010257;NADH dehydrogenase complex assembly;0.0254402304497947!GO:0033108;mitochondrial respiratory chain complex assembly;0.0254402304497947!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0257773278294996!GO:0008092;cytoskeletal protein binding;0.0259004327288515!GO:0016790;thiolester hydrolase activity;0.0262099594601718!GO:0030522;intracellular receptor-mediated signaling pathway;0.0277792150784517!GO:0006400;tRNA modification;0.0284336231440269!GO:0030658;transport vesicle membrane;0.0290443549742649!GO:0043596;nuclear replication fork;0.0292675347518881!GO:0043130;ubiquitin binding;0.0292675347518881!GO:0032182;small conjugating protein binding;0.0292675347518881!GO:0004843;ubiquitin-specific protease activity;0.0300224291258468!GO:0009112;nucleobase metabolic process;0.030161784428417!GO:0030433;ER-associated protein catabolic process;0.0301973580708424!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0301973580708424!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0302018240821055!GO:0015002;heme-copper terminal oxidase activity;0.0302018240821055!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0302018240821055!GO:0004129;cytochrome-c oxidase activity;0.0302018240821055!GO:0007017;microtubule-based process;0.0302299925814543!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0307150758745402!GO:0030833;regulation of actin filament polymerization;0.0309497780811076!GO:0008629;induction of apoptosis by intracellular signals;0.0310361783888179!GO:0043407;negative regulation of MAP kinase activity;0.0311449696972007!GO:0006506;GPI anchor biosynthetic process;0.0315649035346561!GO:0031124;mRNA 3'-end processing;0.0316583534035664!GO:0005876;spindle microtubule;0.0319084685170221!GO:0006144;purine base metabolic process;0.0320333413760725!GO:0051128;regulation of cellular component organization and biogenesis;0.0320517267842726!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0342951232886447!GO:0006897;endocytosis;0.0350639137688903!GO:0010324;membrane invagination;0.0350639137688903!GO:0008320;protein transmembrane transporter activity;0.0352545491480611!GO:0046128;purine ribonucleoside metabolic process;0.0352545491480611!GO:0042278;purine nucleoside metabolic process;0.0352545491480611!GO:0006505;GPI anchor metabolic process;0.0354246821614673!GO:0017134;fibroblast growth factor binding;0.0354585816391111!GO:0005784;translocon complex;0.035466853380655!GO:0042393;histone binding;0.0355229706985979!GO:0004518;nuclease activity;0.0363136826376796!GO:0045792;negative regulation of cell size;0.0367143783721064!GO:0006733;oxidoreduction coenzyme metabolic process;0.0368955984823585!GO:0008610;lipid biosynthetic process;0.0369020100213627!GO:0005484;SNAP receptor activity;0.0370358732423503!GO:0030911;TPR domain binding;0.0374150100062072!GO:0006275;regulation of DNA replication;0.0374949873872839!GO:0008243;plasminogen activator activity;0.0376289582486374!GO:0031371;ubiquitin conjugating enzyme complex;0.0376543712466084!GO:0016407;acetyltransferase activity;0.0377115254278884!GO:0030496;midbody;0.0377505915231911!GO:0032259;methylation;0.0378161698233254!GO:0030125;clathrin vesicle coat;0.0378315199167842!GO:0030665;clathrin coated vesicle membrane;0.0378315199167842!GO:0030134;ER to Golgi transport vesicle;0.0380601794829619!GO:0030508;thiol-disulfide exchange intermediate activity;0.0383341460464078!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0384666809244971!GO:0005938;cell cortex;0.0386655367898277!GO:0006778;porphyrin metabolic process;0.0388072238899304!GO:0033013;tetrapyrrole metabolic process;0.0388072238899304!GO:0004221;ubiquitin thiolesterase activity;0.0391276802326683!GO:0031326;regulation of cellular biosynthetic process;0.0392884827228183!GO:0019206;nucleoside kinase activity;0.0392884827228183!GO:0000178;exosome (RNase complex);0.0394356932975009!GO:0009889;regulation of biosynthetic process;0.0397992651570809!GO:0006520;amino acid metabolic process;0.0399328408926808!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0399498229397283!GO:0008154;actin polymerization and/or depolymerization;0.0400694257689207!GO:0015036;disulfide oxidoreductase activity;0.0403232578511395!GO:0031970;organelle envelope lumen;0.0406305031024666!GO:0007265;Ras protein signal transduction;0.0412039366030309!GO:0008408;3'-5' exonuclease activity;0.042107687221125!GO:0043492;ATPase activity, coupled to movement of substances;0.0421858260319458!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0422042572421746!GO:0042770;DNA damage response, signal transduction;0.0427151630184639!GO:0022406;membrane docking;0.0433523552591439!GO:0048278;vesicle docking;0.0433523552591439!GO:0007041;lysosomal transport;0.0455721362829657!GO:0043414;biopolymer methylation;0.0458624896465937!GO:0022884;macromolecule transmembrane transporter activity;0.0460177512903874!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0460177512903874!GO:0006509;membrane protein ectodomain proteolysis;0.0461459376120529!GO:0033619;membrane protein proteolysis;0.0461459376120529!GO:0008538;proteasome activator activity;0.0464884826988735!GO:0030503;regulation of cell redox homeostasis;0.046613869699236!GO:0000152;nuclear ubiquitin ligase complex;0.0469022557138965!GO:0003677;DNA binding;0.0469526539456317!GO:0009967;positive regulation of signal transduction;0.04790271698286!GO:0004003;ATP-dependent DNA helicase activity;0.0480427390041765!GO:0005732;small nucleolar ribonucleoprotein complex;0.0481388686577487!GO:0006695;cholesterol biosynthetic process;0.0487851855890359!GO:0048146;positive regulation of fibroblast proliferation;0.0488970278091137!GO:0006378;mRNA polyadenylation;0.0491046302568534 | |||
|sample_id=10442 | |sample_id=10442 | ||
|sample_note= | |sample_note= | ||
Revision as of 20:49, 25 June 2012
| Name: | schwannoma cell line:HS-PSS |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | {{{library_id}}} |
| Sample type: | {{{sample_category}}} |
| Genomic View: | UCSC |
| CAGEd-oPOSSUM: | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
no result for this sample
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11245
library id: CNhs11183
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11245
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.792 |
| 10 | 10 | 0.0384 |
| 100 | 100 | 0.316 |
| 101 | 101 | 0.682 |
| 102 | 102 | 0.799 |
| 103 | 103 | 0.832 |
| 104 | 104 | 0.819 |
| 105 | 105 | 0.533 |
| 106 | 106 | 0.00224 |
| 107 | 107 | 0.496 |
| 108 | 108 | 0.513 |
| 109 | 109 | 0.348 |
| 11 | 11 | 0.979 |
| 110 | 110 | 0.283 |
| 111 | 111 | 0.0977 |
| 112 | 112 | 0.481 |
| 113 | 113 | 0.0302 |
| 114 | 114 | 0.718 |
| 115 | 115 | 0.0613 |
| 116 | 116 | 0.253 |
| 117 | 117 | 0.246 |
| 118 | 118 | 0.998 |
| 119 | 119 | 0.122 |
| 12 | 12 | 0.448 |
| 120 | 120 | 0.225 |
| 121 | 121 | 0.722 |
| 122 | 122 | 0.758 |
| 123 | 123 | 0.682 |
| 124 | 124 | 0.577 |
| 125 | 125 | 0.503 |
| 126 | 126 | 0.274 |
| 127 | 127 | 0.658 |
| 128 | 128 | 0.0271 |
| 129 | 129 | 0.368 |
| 13 | 13 | 0.179 |
| 130 | 130 | 0.138 |
| 131 | 131 | 0.44 |
| 132 | 132 | 0.84 |
| 133 | 133 | 0.263 |
| 134 | 134 | 0.114 |
| 135 | 135 | 0.536 |
| 136 | 136 | 0.747 |
| 137 | 137 | 0.682 |
| 138 | 138 | 0.785 |
| 139 | 139 | 0.373 |
| 14 | 14 | 0.469 |
| 140 | 140 | 0.141 |
| 141 | 141 | 0.247 |
| 142 | 142 | 0.0138 |
| 143 | 143 | 0.282 |
| 144 | 144 | 0.842 |
| 145 | 145 | 0.391 |
| 146 | 146 | 0.186 |
| 147 | 147 | 0.47 |
| 148 | 148 | 0.16 |
| 149 | 149 | 0.233 |
| 15 | 15 | 0.934 |
| 150 | 150 | 0.764 |
| 151 | 151 | 0.241 |
| 152 | 152 | 0.0622 |
| 153 | 153 | 0.563 |
| 154 | 154 | 0.92 |
| 155 | 155 | 0.0243 |
| 156 | 156 | 0.463 |
| 157 | 157 | 0.368 |
| 158 | 158 | 0.453 |
| 159 | 159 | 0.0689 |
| 16 | 16 | 0.615 |
| 160 | 160 | 0.338 |
| 161 | 161 | 0.395 |
| 162 | 162 | 0.78 |
| 163 | 163 | 0.781 |
| 164 | 164 | 0.081 |
| 165 | 165 | 0.358 |
| 166 | 166 | 0.804 |
| 167 | 167 | 0.576 |
| 168 | 168 | 0.514 |
| 169 | 169 | 0.233 |
| 17 | 17 | 0.5 |
| 18 | 18 | 0.162 |
| 19 | 19 | 0.248 |
| 2 | 2 | 0.0685 |
| 20 | 20 | 0.112 |
| 21 | 21 | 0.374 |
| 22 | 22 | 0.175 |
| 23 | 23 | 0.328 |
| 24 | 24 | 0.412 |
| 25 | 25 | 0.288 |
| 26 | 26 | 0.701 |
| 27 | 27 | 0.172 |
| 28 | 28 | 0.848 |
| 29 | 29 | 0.176 |
| 3 | 3 | 0.846 |
| 30 | 30 | 0.223 |
| 31 | 31 | 0.251 |
| 32 | 32 | 0.0356 |
| 33 | 33 | 0.207 |
| 34 | 34 | 0.354 |
| 35 | 35 | 0.855 |
| 36 | 36 | 0.0549 |
| 37 | 37 | 0.553 |
| 38 | 38 | 0.623 |
| 39 | 39 | 0.751 |
| 4 | 4 | 0.0271 |
| 40 | 40 | 0.489 |
| 41 | 41 | 0.91 |
| 42 | 42 | 0.805 |
| 43 | 43 | 0.518 |
| 44 | 44 | 0.472 |
| 45 | 45 | 0.121 |
| 46 | 46 | 0.453 |
| 47 | 47 | 0.719 |
| 48 | 48 | 0.838 |
| 49 | 49 | 0.364 |
| 5 | 5 | 0.172 |
| 50 | 50 | 0.891 |
| 51 | 51 | 0.47 |
| 52 | 52 | 0.0741 |
| 53 | 53 | 0.409 |
| 54 | 54 | 0.396 |
| 55 | 55 | 0.56 |
| 56 | 56 | 0.811 |
| 57 | 57 | 0.456 |
| 58 | 58 | 0.113 |
| 59 | 59 | 0.112 |
| 6 | 6 | 0.699 |
| 60 | 60 | 0.0712 |
| 61 | 61 | 0.578 |
| 62 | 62 | 0.0684 |
| 63 | 63 | 0.699 |
| 64 | 64 | 0.688 |
| 65 | 65 | 0.397 |
| 66 | 66 | 0.232 |
| 67 | 67 | 0.974 |
| 68 | 68 | 0.585 |
| 69 | 69 | 0.682 |
| 7 | 7 | 0.366 |
| 70 | 70 | 0.152 |
| 71 | 71 | 0.987 |
| 72 | 72 | 0.667 |
| 73 | 73 | 0.98 |
| 74 | 74 | 0.306 |
| 75 | 75 | 0.753 |
| 76 | 76 | 0.0511 |
| 77 | 77 | 0.288 |
| 78 | 78 | 0.508 |
| 79 | 79 | 0.333 |
| 8 | 8 | 0.251 |
| 80 | 80 | 0.991 |
| 81 | 81 | 0.957 |
| 82 | 82 | 0.0921 |
| 83 | 83 | 0.852 |
| 84 | 84 | 0.533 |
| 85 | 85 | 0.0828 |
| 86 | 86 | 0.805 |
| 87 | 87 | 0.66 |
| 88 | 88 | 0.616 |
| 89 | 89 | 0.0168 |
| 9 | 9 | 0.469 |
| 90 | 90 | 0.0436 |
| 91 | 91 | 0.533 |
| 92 | 92 | 0.178 |
| 93 | 93 | 0.308 |
| 94 | 94 | 0.596 |
| 95 | 95 | 0.129 |
| 96 | 96 | 0.613 |
| 97 | 97 | 0.781 |
| 98 | 98 | 0.625 |
| 99 | 99 | 0.492 |
library id: CNhs11183
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.896 |
| 10 | 10 | 0.0761 |
| 100 | 100 | 0.529 |
| 101 | 101 | 0.72 |
| 102 | 102 | 0.748 |
| 103 | 103 | 0.703 |
| 104 | 104 | 0.725 |
| 105 | 105 | 0.744 |
| 106 | 106 | 8.98319e-4 |
| 107 | 107 | 0.367 |
| 108 | 108 | 0.376 |
| 109 | 109 | 0.693 |
| 11 | 11 | 0.703 |
| 110 | 110 | 0.55 |
| 111 | 111 | 0.16 |
| 112 | 112 | 0.203 |
| 113 | 113 | 0.0401 |
| 114 | 114 | 0.722 |
| 115 | 115 | 0.0956 |
| 116 | 116 | 0.212 |
| 117 | 117 | 0.457 |
| 118 | 118 | 0.87 |
| 119 | 119 | 0.0392 |
| 12 | 12 | 0.522 |
| 120 | 120 | 0.468 |
| 121 | 121 | 0.436 |
| 122 | 122 | 0.733 |
| 123 | 123 | 0.656 |
| 124 | 124 | 0.954 |
| 125 | 125 | 0.387 |
| 126 | 126 | 0.199 |
| 127 | 127 | 0.489 |
| 128 | 128 | 0.0105 |
| 129 | 129 | 0.396 |
| 13 | 13 | 0.525 |
| 130 | 130 | 0.245 |
| 131 | 131 | 0.307 |
| 132 | 132 | 0.801 |
| 133 | 133 | 0.272 |
| 134 | 134 | 0.197 |
| 135 | 135 | 0.537 |
| 136 | 136 | 0.942 |
| 137 | 137 | 0.837 |
| 138 | 138 | 0.946 |
| 139 | 139 | 0.284 |
| 14 | 14 | 0.407 |
| 140 | 140 | 0.33 |
| 141 | 141 | 0.425 |
| 142 | 142 | 0.018 |
| 143 | 143 | 0.417 |
| 144 | 144 | 0.838 |
| 145 | 145 | 0.439 |
| 146 | 146 | 0.492 |
| 147 | 147 | 0.565 |
| 148 | 148 | 0.201 |
| 149 | 149 | 0.0725 |
| 15 | 15 | 0.916 |
| 150 | 150 | 0.794 |
| 151 | 151 | 0.427 |
| 152 | 152 | 0.0409 |
| 153 | 153 | 0.421 |
| 154 | 154 | 0.994 |
| 155 | 155 | 0.018 |
| 156 | 156 | 0.457 |
| 157 | 157 | 0.626 |
| 158 | 158 | 0.492 |
| 159 | 159 | 0.184 |
| 16 | 16 | 0.408 |
| 160 | 160 | 0.248 |
| 161 | 161 | 0.509 |
| 162 | 162 | 0.71 |
| 163 | 163 | 0.696 |
| 164 | 164 | 0.139 |
| 165 | 165 | 0.379 |
| 166 | 166 | 0.877 |
| 167 | 167 | 0.676 |
| 168 | 168 | 0.241 |
| 169 | 169 | 0.117 |
| 17 | 17 | 0.476 |
| 18 | 18 | 0.175 |
| 19 | 19 | 0.16 |
| 2 | 2 | 0.0921 |
| 20 | 20 | 0.18 |
| 21 | 21 | 0.347 |
| 22 | 22 | 0.136 |
| 23 | 23 | 0.263 |
| 24 | 24 | 0.217 |
| 25 | 25 | 0.258 |
| 26 | 26 | 0.502 |
| 27 | 27 | 0.134 |
| 28 | 28 | 0.929 |
| 29 | 29 | 0.366 |
| 3 | 3 | 0.871 |
| 30 | 30 | 0.243 |
| 31 | 31 | 0.214 |
| 32 | 32 | 0.00246 |
| 33 | 33 | 0.344 |
| 34 | 34 | 0.373 |
| 35 | 35 | 0.872 |
| 36 | 36 | 0.0635 |
| 37 | 37 | 0.868 |
| 38 | 38 | 0.544 |
| 39 | 39 | 0.566 |
| 4 | 4 | 0.0335 |
| 40 | 40 | 0.728 |
| 41 | 41 | 0.917 |
| 42 | 42 | 0.697 |
| 43 | 43 | 0.349 |
| 44 | 44 | 0.196 |
| 45 | 45 | 0.131 |
| 46 | 46 | 0.397 |
| 47 | 47 | 0.934 |
| 48 | 48 | 0.961 |
| 49 | 49 | 0.267 |
| 5 | 5 | 0.125 |
| 50 | 50 | 0.916 |
| 51 | 51 | 0.41 |
| 52 | 52 | 0.0549 |
| 53 | 53 | 0.758 |
| 54 | 54 | 0.324 |
| 55 | 55 | 0.354 |
| 56 | 56 | 0.898 |
| 57 | 57 | 0.533 |
| 58 | 58 | 0.071 |
| 59 | 59 | 0.103 |
| 6 | 6 | 0.539 |
| 60 | 60 | 0.0512 |
| 61 | 61 | 0.785 |
| 62 | 62 | 0.0411 |
| 63 | 63 | 0.538 |
| 64 | 64 | 0.52 |
| 65 | 65 | 0.308 |
| 66 | 66 | 0.219 |
| 67 | 67 | 0.873 |
| 68 | 68 | 0.546 |
| 69 | 69 | 0.447 |
| 7 | 7 | 0.276 |
| 70 | 70 | 0.112 |
| 71 | 71 | 0.874 |
| 72 | 72 | 0.486 |
| 73 | 73 | 0.588 |
| 74 | 74 | 0.304 |
| 75 | 75 | 0.925 |
| 76 | 76 | 0.0918 |
| 77 | 77 | 0.301 |
| 78 | 78 | 0.386 |
| 79 | 79 | 0.417 |
| 8 | 8 | 0.174 |
| 80 | 80 | 0.727 |
| 81 | 81 | 0.827 |
| 82 | 82 | 0.0726 |
| 83 | 83 | 0.413 |
| 84 | 84 | 0.538 |
| 85 | 85 | 0.105 |
| 86 | 86 | 0.951 |
| 87 | 87 | 0.569 |
| 88 | 88 | 0.804 |
| 89 | 89 | 0.0176 |
| 9 | 9 | 0.502 |
| 90 | 90 | 0.0919 |
| 91 | 91 | 0.529 |
| 92 | 92 | 0.216 |
| 93 | 93 | 0.469 |
| 94 | 94 | 0.652 |
| 95 | 95 | 0.234 |
| 96 | 96 | 0.705 |
| 97 | 97 | 0.99 |
| 98 | 98 | 0.494 |
| 99 | 99 | 0.423 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11245
library id: CNhs11183
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
FF:0103225 neurilemoma cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000333 (migratory neural crest cell)
0000055 (non-terminally differentiated cell)
0000548 (animal cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0002319 (neural cell)
0000221 (ectodermal cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000219 (motile cell)
0002573 (Schwann cell)
0000123 (neuron associated cell (sensu Vertebrata))
0000125 (glial cell)
0000030 (glioblast)
0000255 (eukaryotic cell)
0000133 (neurectodermal cell)
0000339 (glioblast (sensu Vertebrata))
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0000010 (peripheral nervous system)
0001016 (nervous system)
0000924 (ectoderm)
0006601 (presumptive ectoderm)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
