FF:10784-110H1: Difference between revisions

Revision as of 19:52, 9 July 2012

Name:	mucinous cystadenocarcinoma cell line:MCAS
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	female
age	unknown
cell type	unclassifiable
cell line	MCAS
company	JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.02
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.316
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.063
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0707
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0283
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0427
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.574
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.243
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.345
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0051
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11873

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.558
MA0003.1	MA0003.1	0.978
MA0004.1	MA0004.1	0.0619
MA0006.1	MA0006.1	0.22
MA0007.1	MA0007.1	0.94
MA0009.1	MA0009.1	0.219
MA0014.1	MA0014.1	0.156
MA0017.1	MA0017.1	0.435
MA0018.2	MA0018.2	0.337
MA0019.1	MA0019.1	0.349
MA0024.1	MA0024.1	0.001
MA0025.1	MA0025.1	0.0218
MA0027.1	MA0027.1	0.898
MA0028.1	MA0028.1	0.0115
MA0029.1	MA0029.1	0.105
MA0030.1	MA0030.1	0.0322
MA0031.1	MA0031.1	0.187
MA0035.2	MA0035.2	7.0002e-5
MA0038.1	MA0038.1	0.831
MA0039.2	MA0039.2	0.0195
MA0040.1	MA0040.1	0.756
MA0041.1	MA0041.1	0.304
MA0042.1	MA0042.1	0.934
MA0043.1	MA0043.1	0.798
MA0046.1	MA0046.1	0.133
MA0047.2	MA0047.2	0.0288
MA0048.1	MA0048.1	0.622
MA0050.1	MA0050.1	0.0253
MA0051.1	MA0051.1	0.61
MA0052.1	MA0052.1	0.466
MA0055.1	MA0055.1	0.00326
MA0057.1	MA0057.1	0.22
MA0058.1	MA0058.1	0.0439
MA0059.1	MA0059.1	0.2
MA0060.1	MA0060.1	0.522
MA0061.1	MA0061.1	0.428
MA0062.2	MA0062.2	0.00809
MA0065.2	MA0065.2	0.319
MA0066.1	MA0066.1	0.656
MA0067.1	MA0067.1	0.656
MA0068.1	MA0068.1	0.41
MA0069.1	MA0069.1	0.661
MA0070.1	MA0070.1	0.812
MA0071.1	MA0071.1	0.524
MA0072.1	MA0072.1	0.799
MA0073.1	MA0073.1	0.728
MA0074.1	MA0074.1	0.391
MA0076.1	MA0076.1	0.0789
MA0077.1	MA0077.1	0.916
MA0078.1	MA0078.1	0.533
MA0079.2	MA0079.2	0.706
MA0080.2	MA0080.2	0.185
MA0081.1	MA0081.1	0.472
MA0083.1	MA0083.1	0.238
MA0084.1	MA0084.1	0.297
MA0087.1	MA0087.1	0.379
MA0088.1	MA0088.1	0.313
MA0090.1	MA0090.1	6.307e-4
MA0091.1	MA0091.1	0.0283
MA0092.1	MA0092.1	0.123
MA0093.1	MA0093.1	0.0696
MA0099.2	MA0099.2	1.6142e-17
MA0100.1	MA0100.1	0.851
MA0101.1	MA0101.1	0.87
MA0102.2	MA0102.2	0.979
MA0103.1	MA0103.1	1.33447e-12
MA0104.2	MA0104.2	0.285
MA0105.1	MA0105.1	0.0122
MA0106.1	MA0106.1	0.898
MA0107.1	MA0107.1	0.992
MA0108.2	MA0108.2	0.921
MA0111.1	MA0111.1	0.842
MA0112.2	MA0112.2	0.901
MA0113.1	MA0113.1	0.707
MA0114.1	MA0114.1	0.0854
MA0115.1	MA0115.1	0.202
MA0116.1	MA0116.1	0.0303
MA0117.1	MA0117.1	0.611
MA0119.1	MA0119.1	0.618
MA0122.1	MA0122.1	0.565
MA0124.1	MA0124.1	0.881
MA0125.1	MA0125.1	0.187
MA0131.1	MA0131.1	0.891
MA0135.1	MA0135.1	0.284
MA0136.1	MA0136.1	0.942
MA0137.2	MA0137.2	0.11
MA0138.2	MA0138.2	0.0137
MA0139.1	MA0139.1	0.883
MA0140.1	MA0140.1	0.0464
MA0141.1	MA0141.1	0.912
MA0142.1	MA0142.1	0.342
MA0143.1	MA0143.1	0.625
MA0144.1	MA0144.1	0.488
MA0145.1	MA0145.1	0.27
MA0146.1	MA0146.1	0.168
MA0147.1	MA0147.1	0.187
MA0148.1	MA0148.1	0.00461
MA0149.1	MA0149.1	0.144
MA0150.1	MA0150.1	0.0366
MA0152.1	MA0152.1	0.228
MA0153.1	MA0153.1	0.0544
MA0154.1	MA0154.1	0.043
MA0155.1	MA0155.1	0.178
MA0156.1	MA0156.1	0.384
MA0157.1	MA0157.1	0.695
MA0159.1	MA0159.1	0.241
MA0160.1	MA0160.1	0.106
MA0162.1	MA0162.1	0.836
MA0163.1	MA0163.1	0.011
MA0164.1	MA0164.1	0.685
MA0258.1	MA0258.1	0.79
MA0259.1	MA0259.1	0.737

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11873

Novel motif	Logo	P-value
1	1	0.581
10	10	0.956
100	100	0.885
101	101	0.0491
102	102	0.403
103	103	0.391
104	104	0.524
105	105	0.063
106	106	0.0745
107	107	0.104
108	108	0.388
109	109	0.00427
11	11	0.62
110	110	0.756
111	111	0.465
112	112	0.385
113	113	0.0373
114	114	0.65
115	115	0.813
116	116	0.25
117	117	0.621
118	118	0.568
119	119	0.582
12	12	0.673
120	120	0.602
121	121	0.947
122	122	0.015
123	123	0.62
124	124	0.0892
125	125	0.949
126	126	0.385
127	127	0.278
128	128	0.918
129	129	0.592
13	13	0.0757
130	130	0.415
131	131	0.512
132	132	0.857
133	133	0.12
134	134	0.0987
135	135	0.0274
136	136	0.112
137	137	0.332
138	138	0.789
139	139	0.665
14	14	0.967
140	140	0.794
141	141	0.246
142	142	0.671
143	143	0.22
144	144	0.0383
145	145	0.73
146	146	0.492
147	147	0.0562
148	148	0.138
149	149	0.207
15	15	0.179
150	150	0.256
151	151	0.816
152	152	0.0254
153	153	0.628
154	154	0.96
155	155	0.773
156	156	0.225
157	157	0.685
158	158	0.672
159	159	0.767
16	16	0.101
160	160	0.949
161	161	0.798
162	162	0.99
163	163	0.159
164	164	0.439
165	165	0.585
166	166	0.122
167	167	0.847
168	168	0.478
169	169	0.177
17	17	0.231
18	18	0.625
19	19	0.261
2	2	0.691
20	20	0.13
21	21	0.503
22	22	0.912
23	23	0.842
24	24	0.681
25	25	0.856
26	26	0.148
27	27	0.723
28	28	0.35
29	29	0.992
3	3	0.538
30	30	0.492
31	31	0.472
32	32	0.00728
33	33	0.0924
34	34	0.644
35	35	0.105
36	36	0.591
37	37	0.821
38	38	0.311
39	39	0.617
4	4	0.285
40	40	0.498
41	41	0.129
42	42	0.816
43	43	0.787
44	44	0.412
45	45	0.479
46	46	0.87
47	47	0.829
48	48	0.829
49	49	0.664
5	5	0.668
50	50	0.14
51	51	0.885
52	52	0.541
53	53	0.386
54	54	0.846
55	55	0.536
56	56	0.937
57	57	0.365
58	58	0.829
59	59	0.708
6	6	0.0255
60	60	0.19
61	61	0.189
62	62	0.649
63	63	0.117
64	64	0.973
65	65	0.562
66	66	0.0479
67	67	0.569
68	68	0.03
69	69	0.047
7	7	0.552
70	70	0.862
71	71	0.287
72	72	0.0556
73	73	0.0108
74	74	0.367
75	75	0.412
76	76	0.685
77	77	0.389
78	78	0.08
79	79	0.00327
8	8	0.958
80	80	0.556
81	81	0.0252
82	82	0.00638
83	83	0.253
84	84	0.465
85	85	0.361
86	86	0.549
87	87	0.0254
88	88	0.413
89	89	0.773
9	9	0.62
90	90	0.978
91	91	0.108
92	92	0.804
93	93	0.392
94	94	0.46
95	95	0.236
96	96	0.227
97	97	0.964
98	98	0.341
99	99	0.397

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11873

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
DOID:3603 mucinous cystadenocarcinoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0104883 cystadenocarcinoma cell line sample
UBERON:0000344 mucosa

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
299 (adenocarcinoma)
3111 (cystadenocarcinoma)
3603 (mucinous cystadenocarcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0003134 (female reproductive organ)
0000344 (mucosa)
0005156 (reproductive structure)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100977 (ovary cell line sample)
0100811 (ovary cancer cell line sample)
0104883 (cystadenocarcinoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.23!168.84!EHF;;chr6:1312325..1312340,+!p1@FOXQ1!2.08!188.07!FOXQ1;;chr11:61520075..61520136,+!p1@C11orf9!1.92!168.20!C11orf9;;chr6:34204921..34204939,+!p3@HMGA1!1.68!1336.97!HMGA1;;chr3:111314186..111314204,-!p1@ZBED2!1.59!38.04!ZBED2;;chr17:46675558..46675577,-!p2@HOXB6!1.58!37.19!HOXB6;;chr6:10415484..10415508,-!p3@TFAP2A!1.55!34.23!TFAP2A;;chr8:55370487..55370503,+!p1@SOX17!1.54!33.60!SOX17;;chr20:50159198..50159299,-!p1@NFATC2!1.53!47.12!NFATC2;;chr6:10415276..10415341,-!p2@TFAP2A!1.49!36.13!TFAP2A;;chr17:46682321..46682362,-!p1@HOXB6!1.48!29.16!HOXB6;;chr1:201979703..201979721,+!p2@ELF3!1.42!25.15!ELF3;;chr1:201979743..201979762,+!p1@ELF3!1.38!23.24!ELF3;;chr7:97840743..97840786,+!p1@BHLHA15!1.37!22.40!BHLHA15;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.13!ZBED1;;chr11:34642656..34642667,+!p2@EHF!1.31!19.44!EHF;;chr6:34204672..34204692,+!p1@HMGA1!1.30!2044.23!HMGA1;;chr13:73633131..73633149,+!p1@KLF5!1.29!194.41!KLF5;;chr1:209979467..209979494,-!p1@IRF6!1.29!20.71!IRF6;;chr5:2751762..2751784,-!p1@IRX2!1.29!18.60!IRX2;;chr17:46687959..46688007,-!p2@HOXB7!1.27!24.30!HOXB7;;chr8:102504651..102504683,+!p1@GRHL2!1.27!17.75!GRHL2;;chr14:75988771..75988826,+!p1@BATF!1.26!22.61!BATF;;chr17:46622229..46622257,-!p6@HOXB2!1.25!19.65!HOXB2;;chr5:72744594..72744609,-!p1@FOXD1!1.22!71.21!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!1.22!18.17!HOXB2;;chr20:22564895..22564910,-!p1@FOXA2!1.22!15.64!FOXA2;;chr21:36421535..36421610,-!p2@RUNX1!1.21!53.25!RUNX1;;chr17:46622440..46622477,-!p5@HOXB2!1.21!16.90!HOXB2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.21!15.21!TFCP2L1;;chr12:27485762..27485776,+!p3@ARNTL2!1.20!39.30!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!1.19!55.79!FOSL1;;chr5:134369905..134369972,-!p1@PITX1!1.19!22.19!PITX1;;chr1:37945588..37945604,+!p3@ZC3H12A!1.18!14.16!ZC3H12A;;chr11:65686732..65686756,+!p2@DRAP1!1.17!58.32!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!1.17!24.09!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!1.11!13.52!PPARG;;chr12:77459306..77459365,-!p1@E2F7!1.10!143.90!E2F7;;chr11:65667846..65667868,-!p1@FOSL1!1.06!276.61!FOSL1;;chr12:27485823..27485868,+!p2@ARNTL2!1.06!43.11!ARNTL2;;chr18:19749541..19749557,+!p1@GATA6!1.06!33.18!GATA6;;chr5:72744445..72744466,-!p2@FOXD1!1.06!17.75!FOXD1;;chr15:67418047..67418093,+!p4@SMAD3!1.05!12.89!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.03!HMGA2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.04!12.47!L3MBTL4;;chr3:12329358..12329393,+!p3@PPARG!1.03!24.30!PPARG;;chr2:70142232..70142251,+!p1@MXD1!1.01!53.67!MXD1;;chr15:67418119..67418162,+!p5@SMAD3!1.00!10.14!SMAD3;;chr3:69915385..69915438,+!p3@MITF!1.00!9.09!MITF;;chr5:50679228..50679288,+!p1@ISL1!1.00!9.09!ISL1;;chr6:10419768..10419819,-!p6@TFAP2A!1.00!9.09!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.99!41.42!HMGA2;;chr11:34645791..34645836,+!p3@EHF!0.99!8.66!EHF;;chr5:134369879..134369898,-!p2@PITX1!0.99!8.66!PITX1;;chr2:101436564..101436647,+!p1@NPAS2!0.98!176.87!NPAS2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.98!76.92!PPP1R13L;;chr12:80084737..80084763,-!p3@PAWR!0.98!33.18!PAWR;;chr14:38064429..38064486,-!p1@FOXA1!0.95!7.82!FOXA1;;chr12:27485785..27485816,+!p1@ARNTL2!0.92!52.41!ARNTL2;;chr6:10412600..10412637,-!p1@TFAP2A!0.92!12.47!TFAP2A;;chr21:38071430..38071456,+!p1@SIM2!0.92!7.40!SIM2;;chr17:7493405..7493419,-!p1@SOX15!0.92!7.40!SOX15;;chr12:66218255..66218304,+!p3@HMGA2!0.91!20.07!HMGA2;;chr6:34524049..34524089,-!p2@SPDEF!0.91!7.18!SPDEF;;chr17:46703212..46703238,-!p2@HOXB9!0.91!7.18!HOXB9;;chr19:1753498..1753519,+!p1@ONECUT3!0.91!7.18!ONECUT3;;chr17:70117153..70117174,+!p1@SOX9!0.90!74.38!SOX9;;chr17:46621146..46621180,-!p10@HOXB2!0.89!6.76!HOXB2;;chr17:46690839..46690884,-!p1@HOXB8!0.89!6.76!HOXB8;;chr17:46687935..46687950,-!p3@HOXB7!0.88!6.55!HOXB7;;chr20:49547691..49547724,-!p2@ADNP!0.87!42.05!ADNP;;chr17:46675469..46675481,-!p4@HOXB6!0.87!6.34!HOXB6;;chr17:46691732..46691766,-!p4@HOXB8!0.87!6.34!HOXB8;;chr3:111314230..111314241,-!p2@ZBED2!0.87!6.34!ZBED2;;chr17:41623692..41623715,-!p1@ETV4!0.86!28.10!ETV4;;chr17:46692457..46692484,-!p2@HOXB8!0.85!6.13!HOXB8;;chr3:181429704..181429722,+!p1@SOX2!0.85!6.13!SOX2;;chr3:24536253..24536328,-!p1@THRB!0.84!11.62!THRB;;chr10:48355030..48355090,+!p1@ZNF488!0.84!7.82!ZNF488;;chr20:22565185..22565223,-!p3@FOXA2!0.84!5.92!FOXA2;;chr7:101917447..101917479,+!p4@CUX1!0.84!5.92!CUX1;;chr7:101917482..101917507,+!p6@CUX1!0.84!5.92!CUX1;;chr16:52581025..52581072,-!p1@TOX3!0.83!5.71!TOX3;;chr6:168227552..168227609,+!p1@MLLT4!0.81!48.18!MLLT4;;chr19:33865009..33865090,+!p3@CEBPG!0.81!7.40!CEBPG;;chr15:96869511..96869525,+!p16@NR2F2!0.81!6.13!NR2F2;;chr11:65554528..65554546,+!p1@OVOL1!0.81!5.49!OVOL1;;chr6:34210478..34210481,+!p8@HMGA1!0.81!5.49!HMGA1;;chr20:22565370..22565388,-!p2@FOXA2!0.81!5.49!FOXA2;;chr14:75988831..75988847,+!p2@BATF!0.80!5.28!BATF;;chr11:65554563..65554576,+!p2@OVOL1!0.80!5.28!OVOL1;;chr10:114710098..114710130,+!p2@TCF7L2!0.79!42.26!TCF7L2;;chr17:46621937..46621966,-!p2@HOXB2!0.79!14.79!HOXB2;;chr9:110250697..110250738,-!p2@KLF4!0.79!6.13!KLF4;;chr3:12329397..12329433,+!p2@PPARG!0.78!12.04!PPARG;;chr1:204042233..204042249,+!p1@SOX13!0.77!33.60!SOX13;;chr2:46524897..46524911,+!p2@EPAS1!0.77!14.58!EPAS1;;chr17:46621101..46621143,-!p7@HOXB2!0.77!6.76!HOXB2;;chr11:65686776..65686787,+!p9@DRAP1!0.77!5.92!DRAP1;;chr17:46675420..46675465,-!p3@HOXB6!0.77!5.71!HOXB6;;chr1:6479968..6479986,-!p1@HES2!0.77!4.86!HES2;;chr6:34524093..34524135,-!p1@SPDEF!0.77!4.86!SPDEF;;chr6:34205372..34205412,+!p5@HMGA1!0.76!26.41!HMGA1;;chr12:66218212..66218244,+!p5@HMGA2!0.76!7.18!HMGA2;;chr3:185826855..185826911,-!p1@ETV5!0.75!139.89!ETV5;;chr2:238600933..238600985,+!p3@LRRFIP1!0.74!27.05!LRRFIP1;;chr5:43120995..43121052,+!p1@ZNF131!0.74!25.36!ZNF131;;chr18:19749517..19749531,+!p3@GATA6!0.74!8.45!GATA6;;chr17:35294075..35294102,+!p1@ENST00000559335!0.74!4.44!LHX1;;chr3:69915369..69915381,+!p4@MITF!0.74!4.44!MITF;;chr12:54380404..54380433,+!p3@HOXC10!0.74!4.44!HOXC10;;chr13:45010939..45011033,-!p1@TSC22D1!0.72!313.16!TSC22D1;;chr17:41277372..41277418,-!p1@BRCA1!0.72!17.12!BRCA1;;chr15:67418099..67418118,+!p16@SMAD3!0.72!4.23!SMAD3;;chr6:10413188..10413249,-!p7@TFAP2A!0.72!4.23!TFAP2A;;chr3:12329339..12329356,+!p5@PPARG!0.72!4.23!PPARG;;chr19:33864571..33864596,+!p2@CEBPG!0.70!10.78!CEBPG;;chr8:67525443..67525459,-!p2@MYBL1!0.70!6.34!MYBL1;;chr12:66218003..66218018,+!p9@HMGA2!0.70!5.07!HMGA2;;chr6:10415263..10415274,-!p8@TFAP2A!0.70!4.01!TFAP2A;;chr8:11561684..11561751,+!p1@GATA4!0.70!4.01!GATA4;;chr17:46675539..46675551,-!p7@HOXB6!0.70!4.01!HOXB6;;chr9:132427972..132428056,+!p1@PRRX2!0.69!5.28!PRRX2;;chr16:2059754..2059777,-!p2@ZNF598!0.68!14.79!ZNF598;;chr17:46692318..46692362,-!p5@HOXB8!0.68!3.80!HOXB8;;chr10:135122906..135122921,+!p4@ZNF511!0.68!3.80!ZNF511;;chr12:54366975..54367001,+!p1@HOXC11!0.68!3.80!HOXC11;;chr10:114709999..114710031,+!p1@TCF7L2!0.67!102.28!TCF7L2;;chr6:34204973..34204990,+!p4@HMGA1!0.67!56.84!HMGA1;;chr4:4291837..4291859,-!p2@LYAR!0.66!13.31!LYAR;;chr12:27485889..27485900,+!p4@ARNTL2!0.66!4.44!ARNTL2;;chr6:10419824..10419840,-!p9@TFAP2A!0.66!3.59!TFAP2A;;chr20:49547593..49547611,-!p3@ADNP!0.65!12.89!ADNP;;chr1:935398..935465,-!p2@HES4!0.64!7.61!HES4;;chr5:2751785..2751808,-!p2@IRX2!0.64!3.38!IRX2;;chr6:28048343..28048354,+!p1@ZNF165!0.64!3.38!ZNF165;;chr7:27153454..27153469,-!p2@HOXA3!0.64!3.38!HOXA3;;chr3:69811858..69811881,+!p5@MITF!0.64!3.38!MITF;;chr17:46622175..46622186,-!p12@HOXB2!0.64!3.38!HOXB2;;chr17:46703528..46703549,-!p5@HOXB9!0.64!3.38!HOXB9;;chr9:110252035..110252057,-!p1@KLF4!0.63!61.49!KLF4;;chr20:42295745..42295765,+!p1@MYBL2!0.62!62.34!MYBL2;;chrX:48900782..48900793,-!p3@TFE3!0.62!6.55!TFE3;;chr2:121493492..121493537,+!p2@GLI2!0.62!5.71!GLI2;;chr17:46675619..46675642,-!p5@HOXB6!0.62!3.17!HOXB6;;chr17:46703687..46703740,-!p1@HOXB9!0.62!3.17!HOXB9;;chr20:49547731..49547753,-!p4@ADNP!0.61!8.88!ADNP;;chr3:101568349..101568365,+!p1@NFKBIZ!0.60!190.60!NFKBIZ;;chr20:49547910..49547988,-!p1@ADNP!0.60!135.45!ADNP;;chr7:86781916..86781963,+!p2@DMTF1!0.60!15.21!DMTF1;;chr5:178157651..178157689,-!p1@ZNF354A!0.60!14.58!ZNF354A;;chr6:1312155..1312187,+!p2@FOXQ1!0.60!2.96!FOXQ1;;chr8:102504690..102504704,+!p3@GRHL2!0.60!2.96!GRHL2;;chr17:46126136..46126152,+!p1@NFE2L1!0.59!183.00!NFE2L1;;chr7:99156249..99156311,+!p1@ZNF655!0.59!79.24!ZNF655;;chr10:43134001..43134026,-!p1@ZNF33B!0.59!15.43!ZNF33B;;chr19:19729477..19729542,-!p1@PBX4!0.59!6.97!PBX4;;chr3:185826814..185826825,-!p3@ETV5!0.59!5.92!ETV5;;chr17:46622114..46622138,-!p4@HOXB2!0.59!4.86!HOXB2;;chr21:36260980..36261011,-!p1@RUNX1!0.58!100.16!RUNX1;;chr19:4065485..4065546,-!p2@ZBTB7A!0.58!30.64!ZBTB7A;;chr17:46622070..46622109,-!p1@HOXB2!0.58!7.18!HOXB2;;chr10:8095593..8095625,+!p3@GATA3!0.58!3.38!GATA3;;chr5:34929677..34929789,+!p1@DNAJC21!0.57!97.63!DNAJC21;;chr4:38665810..38665827,+!p1@KLF3!0.57!48.60!KLF3;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.57!15.00!TAL1;;chr12:51566562..51566584,-!p2@TFCP2!0.57!8.88!TFCP2;;chr9:110251836..110251887,-!p4@KLF4!0.57!3.80!KLF4;;chr17:41623667..41623682,-!p8@ETV4!0.57!2.96!ETV4;;chr1:209979411..209979433,-!p2@IRF6!0.57!2.75!IRF6;;chr2:113994526..113994556,-!p3@PAX8!0.57!2.75!PAX8;;chr4:149363475..149363492,-!p2@NR3C2!0.57!2.75!NR3C2;;chr1:212782094..212782109,+!p1@ATF3!0.56!90.86!ATF3;;chr17:17740287..17740307,-!p1@SREBF1!0.56!86.85!SREBF1;;chr17:38256822..38256851,-!p1@NR1D1!0.56!25.78!NR1D1;;chr12:80084768..80084821,-!p2@PAWR!0.56!22.40!PAWR;;chr20:42295713..42295738,+!p2@MYBL2!0.56!19.02!MYBL2;;chr6:15246200..15246214,+!p2@JARID2!0.56!8.66!JARID2;;chr2:200322654..200322707,-!p2@SATB2!0.56!4.23!SATB2;;chr17:36861393..36861439,+!p2@MLLT6!0.55!18.81!MLLT6;;chr6:126102292..126102329,+!p3@NCOA7!0.55!10.14!NCOA7;;chr1:158979872..158979898,+!p3@IFI16!0.55!9.51!IFI16;;chr10:114711019..114711041,+!p7@TCF7L2!0.55!4.23!TCF7L2;;chr6:34524025..34524045,-!p3@SPDEF!0.55!2.54!SPDEF;;chr15:67418177..67418204,+!p9@SMAD3!0.55!2.54!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.55!2.54!ETV4;;chr17: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1.48!ZNF213;;chr11:130184311..130184362,-!p4@ZBTB44!0.15!1.48!ZBTB44;;chr15:57211660..57211687,+!p6@TCF12!0.15!1.27!TCF12;;chr19:17356189..17356221,-!p2@NR2F6!0.15!1.27!NR2F6;;chr2:74730430..74730451,-!p1@LBX2!0.15!1.27!LBX2;;chr5:172484377..172484418,+!p2@C5orf41!0.15!1.27!CREBRF;;chr15:57210759..57210775,+!p7@TCF12!0.15!1.06!TCF12;;chr20:48807430..48807439,+!p8@CEBPB!0.15!1.06!CEBPB;;chr19:21264943..21264958,+!p3@ZNF714!0.15!0.85!ZNF714;;chr6:151712968..151712992,-!p5@ZBTB2!0.15!0.85!ZBTB2;;chr6:35227247..35227280,+!p3@ZNF76!0.15!0.85!ZNF76;;chr11:57103283..57103290,-!p3@SSRP1!0.15!0.85!SSRP1;;chr14:69260117..69260141,-!p4@ZFP36L1!0.15!0.85!ZFP36L1;;chr5:72743793..72743855,-!p4@FOXD1!0.15!0.63!FOXD1;;chr16:67063262..67063273,+!p7@CBFB!0.15!0.63!CBFB;;chr17:38256695..38256706,-!p7@NR1D1!0.15!0.63!NR1D1;;chr2:11605966..11605981,-!p3@E2F6!0.15!0.63!E2F6;;chr2:101437588..101437619,+!p10@NPAS2!0.15!0.42!NPAS2;;chr2:176987463..176987479,+!p2@HOXD9!0.15!0.42!HOXD9;;chr2:200323212..200323223,-!p8@SATB2!0.15!0.42!SATB2;;chr2:208415075..208415079,+!p8@CREB1!0.15!0.42!CREB1;;chr2:70166212..70166223,+!p16@MXD1!0.15!0.42!MXD1;;chr2:70166499..70166536,+!p6@MXD1!0.15!0.42!MXD1;;chr2:95831587..95831592,+!p4@ZNF2!0.15!0.42!ZNF2;;chr3:114343870..114343887,-!p9@ZBTB20!0.15!0.42!ZBTB20;;chr3:138665969..138665993,-!p2@FOXL2!0.15!0.42!FOXL2;;chr3:185784049..185784050,-!p7@ETV5!0.15!0.42!ETV5;;chr3:69811899..69811913,+!p11@MITF!0.15!0.42!MITF;;chr5:134369683..134369708,-!p7@PITX1!0.15!0.42!PITX1;;chr5:142784730..142784751,-!p26@NR3C1!0.15!0.42!NR3C1;;chr5:174151612..174151633,+!p2@MSX2!0.15!0.42!MSX2;;chr5:174151648..174151659,+!p3@MSX2!0.15!0.42!MSX2;;chr5:56248032..56248039,-!p3@MIER3!0.15!0.42!MIER3;;chr6:10412477..10412490,-!p10@TFAP2A!0.15!0.42!TFAP2A;;chr6:1312688..1312701,+!p3@FOXQ1!0.15!0.42!FOXQ1;;chr6:1312753..1312800,+!p4@FOXQ1!0.15!0.42!FOXQ1;;chr6:1610178..1610190,+!p5@FOXC1!0.15!0.42!FOXC1;;chr6:1612219..1612239,+!p8@FOXC1!0.15!0.42!FOXC1;;chr6:28321971..28321995,-!p1@ZNF323!0.15!0.42!ZNF323;;chr6:28322004..28322023,-!p6@ZNF323!0.15!0.42!ZNF323;;chr7:27153428..27153440,-!p3@HOXA3!0.15!0.42!HOXA3;;chr7:27153613..27153630,-!p6@HOXA3!0.15!0.42!HOXA3;;chr8:102504932..102504952,+!p4@GRHL2!0.15!0.42!GRHL2;;chr8:102504979..102505010,+!p2@GRHL2!0.15!0.42!GRHL2;;chr8:10588010..10588030,-!p1@SOX7!0.15!0.42!SOX7;;chr8:123793708..123793723,+!p6@ZHX2!0.15!0.42!ZHX2;;chr8:28243743..28243752,-!p10@ZNF395!0.15!0.42!ZNF395;;chr8:42698383..42698394,-!p5@THAP1!0.15!0.42!THAP1;;chr8:57123898..57123909,-!p3@PLAG1!0.15!0.42!PLAG1;;chr9:110250629..110250642,-!p7@KLF4!0.15!0.42!KLF4;;chr19:44331593..44331618,+!p5@ZNF283!0.15!0.42!ZNF283;;chr19:44860847..44860861,-!p4@ZFP112,p4@ZNF285!0.15!0.42!ZFP112;;chr19:45579699..45579704,-!p3@ZNF296!0.15!0.42!ZNF296;;chr19:45978178..45978185,+!p23@FOSB!0.15!0.42!FOSB;;chr19:50832895..50832928,+!p3@NR1H2!0.15!0.42!NR1H2;;chr1:10856665..10856683,-!p4@CASZ1!0.15!0.42!CASZ1;;chr1:158985723..158985746,+!p20@IFI16!0.15!0.42!IFI16;;chr1:161736032..161736035,+!p6@ATF6!0.15!0.42!ATF6;;chr1:3568889..3568900,+!p7@TP73!0.15!0.42!TP73;;chr1:3569101..3569115,+!p2@TP73!0.15!0.42!TP73;;chr1:42801540..42801562,-!p4@FOXJ3!0.15!0.42!FOXJ3;;chr1:8763181..8763189,-!p28@RERE!0.15!0.42!RERE;;chr1:8763394..8763399,-!p34@RERE!0.15!0.42!RERE;;chr1:8935427..8935438,-!p28@ENO1!0.15!0.42!ENO1;;chr20:18038521..18038571,-!p1@OVOL2!0.15!0.42!OVOL2;;chr20:52210553..52210568,-!p7@ZNF217!0.15!0.42!ZNF217;;chr21:30671130..30671140,+!p10@BACH1!0.15!0.42!BACH1;;chr21:36421147..36421193,-!p10@RUNX1!0.15!0.42!RUNX1;;chr21:36421401..36421414,-!p16@RUNX1!0.15!0.42!RUNX1;;
+|ffid_belonging_in_development=UBERON:0009117,UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316
 |fonse_cell_line=FF:0100977,FF:0101120
 |fonse_cell_line_closure=FF:0100977,FF:0101120

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FF:10784-110H1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:52, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0