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FFCP PHASE1:Mm9::chr1:169528491..169528505,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20183|HGNC=|MCL_coexpression_id=1177|UniProt=P28705|association_with_transcript=0bp_to_NM_009107,uc007dla.2_5end|description=CAGE_peak_4_at_Rxrg_5end|id=chr1:169528491..169528505,+|ontology_enrichment_celltype=CL:0000117!3.44e-07!23;CL:0000337!3.44e-07!23|ontology_enrichment_celltype_v019_2=CL:0002608,3.87e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.12e-11!49;UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0002346!2.40e-11!71;UBERON:0003075!2.40e-11!71;UBERON:0007284!2.40e-11!71;UBERON:0000033!3.42e-11!63;UBERON:0001049!4.80e-10!52;UBERON:0005068!4.80e-10!52;UBERON:0006241!4.80e-10!52;UBERON:0007135!4.80e-10!52;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0003080!1.27e-08!40;UBERON:0001894!1.47e-08!10;UBERON:0006222!1.47e-08!10;UBERON:0001017!1.56e-08!73;UBERON:0005743!1.56e-08!73;UBERON:0002780!4.17e-08!39;UBERON:0001890!4.17e-08!39;UBERON:0006240!4.17e-08!39;UBERON:0000955!1.40e-07!50;UBERON:0006238!1.40e-07!50;UBERON:0002616!3.58e-07!49;UBERON:0000007!4.35e-07!8;UBERON:0003296!4.35e-07!8;UBERON:0010133!4.35e-07!8;UBERON:0000153!7.46e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.02e-17,10;UBERON:0006222,1.02e-17,10;UBERON:0003056,1.73e-17,49;UBERON:0002346,1.73e-16,64;UBERON:0003075,1.73e-16,64;UBERON:0007284,1.73e-16,64;UBERON:0010371,1.75e-16,73;UBERON:0003080,2.38e-16,40;UBERON:0001049,3.61e-16,52;UBERON:0005068,3.61e-16,52;UBERON:0006241,3.61e-16,52;UBERON:0007135,3.61e-16,52;UBERON:0000073,2.29e-15,54;UBERON:0002780,4.72e-15,39;UBERON:0001890,4.72e-15,39;UBERON:0006240,4.72e-15,39;UBERON:0000007,1.12e-13,8;UBERON:0003296,1.12e-13,8;UBERON:0010133,1.12e-13,8;UBERON:0002616,1.35e-13,46;UBERON:0000955,3.30e-13,47;UBERON:0006238,3.30e-13,47;UBERON:0010314,9.97e-12,92;UBERON:0004121,3.74e-11,95;UBERON:0000924,3.74e-11,95;UBERON:0006601,3.74e-11,95;UBERON:0001017,4.92e-11,73;UBERON:0001016,1.36e-10,75;UBERON:0002020,4.70e-07,34|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0.571301968807607,1.76694832761291,6.36952155917761,6.99671938433125,8.27296907949019,0,0.127687338085188,0.307213066512487,0.527545150920775,1.09785172322892,0.52091337055676,0,1.12552522006336,0.61119299110724,1.17851434189467,0.854230084794618,2.60959224155421,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,1.19832511523858,21.5025283324754,38.952849154988,1.39059456153821,2.30143911597297,2.28566849015516,5.51620294430376,0.101839363850316,0.124406970610093,0,0,0.780722657776222,0.689706313300419,0.900310649026746,2.86339153887859,2.10913147369116,1.15302348256365,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.891756905004413,0.584799949701329,0.439100230582101,0.805238512562231,1.05144974282064,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0,0,0,0,1.21390318077491,1.209294227859,0.565815239267694,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,7.14923172082955,0.900305470156551,1.16422815404479,1.07168517515796,11.7044554203901,12.3074484145429,8.72109809191241,6.08929898229199,0,0,0,0.49465875882444,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.735374033800057,2.44471400581777,0.618105171716683,1.28367683836726,0.758091635291392,1.52087579934144,0.754505365544305,1.12369808963859,1.34452820050225,0.976402972245426,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0.147198920134397,0,0.532427418478012,0.238436189947321,0.872078499793971,0.941093804153306,0.676916863133412,1.28049581010941,0.789209134313529,1.7654534799962,1.12228454331548,0.711810108745045,1.0835493061312,0,0.309873682371932,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0.882365676478062,1.15933917810211|short_description=p4@Rxrg}}
|EntrezGene=20183
|HGNC=
|MCL_coexpression_id=1177
|UniProt=P28705
|association_with_transcript=0bp_to_NM_009107,uc007dla.2_5end
|description=CAGE_peak_4_at_Rxrg_5end
|id=chr1:169528491..169528505,+
|ontology_enrichment_celltype=CL:0000117!3.44e-07!23;CL:0000337!3.44e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002608,3.87e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.12e-11!49;UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0002346!2.40e-11!71;UBERON:0003075!2.40e-11!71;UBERON:0007284!2.40e-11!71;UBERON:0000033!3.42e-11!63;UBERON:0001049!4.80e-10!52;UBERON:0005068!4.80e-10!52;UBERON:0006241!4.80e-10!52;UBERON:0007135!4.80e-10!52;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0003080!1.27e-08!40;UBERON:0001894!1.47e-08!10;UBERON:0006222!1.47e-08!10;UBERON:0001017!1.56e-08!73;UBERON:0005743!1.56e-08!73;UBERON:0002780!4.17e-08!39;UBERON:0001890!4.17e-08!39;UBERON:0006240!4.17e-08!39;UBERON:0000955!1.40e-07!50;UBERON:0006238!1.40e-07!50;UBERON:0002616!3.58e-07!49;UBERON:0000007!4.35e-07!8;UBERON:0003296!4.35e-07!8;UBERON:0010133!4.35e-07!8;UBERON:0000153!7.46e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.02e-17,10;UBERON:0006222,1.02e-17,10;UBERON:0003056,1.73e-17,49;UBERON:0002346,1.73e-16,64;UBERON:0003075,1.73e-16,64;UBERON:0007284,1.73e-16,64;UBERON:0010371,1.75e-16,73;UBERON:0003080,2.38e-16,40;UBERON:0001049,3.61e-16,52;UBERON:0005068,3.61e-16,52;UBERON:0006241,3.61e-16,52;UBERON:0007135,3.61e-16,52;UBERON:0000073,2.29e-15,54;UBERON:0002780,4.72e-15,39;UBERON:0001890,4.72e-15,39;UBERON:0006240,4.72e-15,39;UBERON:0000007,1.12e-13,8;UBERON:0003296,1.12e-13,8;UBERON:0010133,1.12e-13,8;UBERON:0002616,1.35e-13,46;UBERON:0000955,3.30e-13,47;UBERON:0006238,3.30e-13,47;UBERON:0010314,9.97e-12,92;UBERON:0004121,3.74e-11,95;UBERON:0000924,3.74e-11,95;UBERON:0006601,3.74e-11,95;UBERON:0001017,4.92e-11,73;UBERON:0001016,1.36e-10,75;UBERON:0002020,4.70e-07,34
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0.571301968807607,1.76694832761291,6.36952155917761,6.99671938433125,8.27296907949019,0,0.127687338085188,0.307213066512487,0.527545150920775,1.09785172322892,0.52091337055676,0,1.12552522006336,0.61119299110724,1.17851434189467,0.854230084794618,2.60959224155421,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,1.19832511523858,21.5025283324754,38.952849154988,1.39059456153821,2.30143911597297,2.28566849015516,5.51620294430376,0.101839363850316,0.124406970610093,0,0,0.780722657776222,0.689706313300419,0.900310649026746,2.86339153887859,2.10913147369116,1.15302348256365,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.891756905004413,0.584799949701329,0.439100230582101,0.805238512562231,1.05144974282064,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0,0,0,0,1.21390318077491,1.209294227859,0.565815239267694,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,7.14923172082955,0.900305470156551,1.16422815404479,1.07168517515796,11.7044554203901,12.3074484145429,8.72109809191241,6.08929898229199,0,0,0,0.49465875882444,0.484393280087717,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.735374033800057,2.44471400581777,0.618105171716683,1.28367683836726,0.758091635291392,1.52087579934144,0.754505365544305,1.12369808963859,1.34452820050225,0.976402972245426,0.476293691283074,0.927074607558844,0.77163688185482,0.412085900803307,0.147198920134397,0,0.532427418478012,0.238436189947321,0.872078499793971,0.941093804153306,0.676916863133412,1.28049581010941,0.789209134313529,1.7654534799962,1.12228454331548,0.711810108745045,1.0835493061312,0,0.309873682371932,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0.882365676478062,1.15933917810211
|short_description=p4@Rxrg
}}

Revision as of 19:35, 13 September 2013

Short description:p4@Rxrg
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rxrg_5end
Coexpression cluster:MCL_coexpression_mm9:1177
Association with transcript: 0bp_to_NM_009107, uc007dla.2_5end
EntrezGene:Rxrg
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Rxrg

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F138.95
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B911.70
pituitary gland, embryo E16.CNhs11036.449-43F612.31
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hippocampal neuron3.87e-083

Uber anatomy
Ontology termp-valuen
diencephalon1.02e-1710
future diencephalon1.02e-1710
pre-chordal neural plate1.73e-1749
neurectoderm1.73e-1664
neural plate1.73e-1664
presumptive neural plate1.73e-1664
ecto-epithelium1.75e-1673
anterior neural tube2.38e-1640
neural tube3.61e-1652
neural rod3.61e-1652
future spinal cord3.61e-1652
neural keel3.61e-1652
regional part of nervous system2.29e-1554
regional part of forebrain4.72e-1539
forebrain4.72e-1539
future forebrain4.72e-1539
pituitary gland1.12e-138
gland of diencephalon1.12e-138
neuroendocrine gland1.12e-138
regional part of brain1.35e-1346
brain3.30e-1347
future brain3.30e-1347
structure with developmental contribution from neural crest9.97e-1292
ectoderm-derived structure3.74e-1195
ectoderm3.74e-1195
presumptive ectoderm3.74e-1195
central nervous system4.92e-1173
nervous system1.36e-1075
gray matter4.70e-0734







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