FFCP PHASE1:Mm9::chr11:47802464..47802482,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24052|HGNC=|MCL_coexpression_id=483|UniProt=Q8C8D9|association_with_transcript=0bp_to_ENSMUST00000128558,uc007ioy.1_5end|description=CAGE_peak_7_at_Sgcd_5end|id=chr11:47802464..47802482,-|ontology_enrichment_celltype=CL:0000540!7.95e-11!33;CL:0000047!7.95e-11!33;CL:0000031!7.95e-11!33;CL:0000404!7.95e-11!33;CL:0000117!1.17e-09!23;CL:0000337!1.17e-09!23;CL:0000393!2.61e-07!39;CL:0000211!2.61e-07!39;CL:0000221!5.19e-07!44;CL:0000133!5.19e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.53e-13,23;CL:0000337,7.53e-13,23;CL:0000540,1.78e-11,33;CL:0000047,1.78e-11,33;CL:0000031,1.78e-11,33;CL:0000404,1.78e-11,33;CL:0000393,5.56e-09,39;CL:0000211,5.56e-09,39;CL:0000221,1.20e-08,44;CL:0000133,1.20e-08,44;CL:0002319,1.01e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.32e-17!73;UBERON:0005743!9.32e-17!73;UBERON:0000073!4.04e-16!75;UBERON:0001016!4.04e-16!75;UBERON:0002346!4.22e-13!71;UBERON:0003075!4.22e-13!71;UBERON:0007284!4.22e-13!71;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0001049!1.29e-12!52;UBERON:0005068!1.29e-12!52;UBERON:0006241!1.29e-12!52;UBERON:0007135!1.29e-12!52;UBERON:0000955!2.89e-11!50;UBERON:0006238!2.89e-11!50;UBERON:0000033!3.65e-11!63;UBERON:0002616!1.05e-10!49;UBERON:0002020!1.26e-09!34;UBERON:0003080!3.83e-08!40;UBERON:0003056!5.82e-08!49;UBERON:0002780!1.47e-07!39;UBERON:0001890!1.47e-07!39;UBERON:0006240!1.47e-07!39;UBERON:0002791!7.94e-07!29;UBERON:0003528!7.94e-07!29;UBERON:0001893!7.94e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.40e-18,73;UBERON:0001016,3.46e-17,75;UBERON:0000073,1.44e-14,54;UBERON:0001049,6.44e-14,52;UBERON:0005068,6.44e-14,52;UBERON:0006241,6.44e-14,52;UBERON:0007135,6.44e-14,52;UBERON:0004121,1.27e-13,95;UBERON:0000924,1.27e-13,95;UBERON:0006601,1.27e-13,95;UBERON:0003076,1.96e-12,12;UBERON:0003057,1.96e-12,12;UBERON:0002346,6.70e-12,64;UBERON:0003075,6.70e-12,64;UBERON:0007284,6.70e-12,64;UBERON:0010371,1.06e-11,73;UBERON:0002240,5.76e-10,6;UBERON:0005174,5.76e-10,6;UBERON:0001137,5.76e-10,6;UBERON:0000955,3.12e-09,47;UBERON:0006238,3.12e-09,47;UBERON:0002020,1.22e-08,34;UBERON:0001948,1.47e-08,5;UBERON:0002315,1.47e-08,5;UBERON:0002616,2.10e-08,46;UBERON:0010314,1.05e-07,92;UBERON:0002950,1.49e-07,4;UBERON:0001891,1.49e-07,4;UBERON:0009616,1.49e-07,4;UBERON:0010286,1.49e-07,4;UBERON:0002420,9.23e-07,8;UBERON:0007245,9.23e-07,8;UBERON:0010009,9.23e-07,8;UBERON:0010011,9.23e-07,8;UBERON:0000454,9.23e-07,8|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0.287536413054709,0.919218786610021,7.70811166995721,1.65993539510744,0.921639199537461,1.31886287730194,0.914876436024097,1.04182674111352,1.3959149950069,5.06486349028512,2.29197371665215,2.94628585473668,2.27794689278565,2.42319279572891,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,3.56059401582874,0,0,0,0,3.74476598512057,2.28750301409313,0.753926112677186,3.30266208365325,3.3243009452943,2.49345653471472,2.75810147215188,1.12023300235348,0.124406970610093,0.252722758433675,0,1.04096354370163,0.459804208866946,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,2.11141348996739,1.7535658594206,1.11218899690239,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,0,0,0.387904974335251,0.280543279561274,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.488894929326078,0,0.704070744865506,0.502518772325447,0.952174563544055,0.195133647857799,0.945810864637146,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,1.11399337041197,0.283076530788832,0,0.292255857911312,0.395287777946524,1.92792789853084,0.283880170416537,0.35613120733451,0.81443479676788,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,1.78368817602071,0.987294123612726,0,0,0.21183207086382,0,0,0,0.06031292492815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| ||
|EntrezGene=24052 | |||
|HGNC= | |||
|MCL_coexpression_id=483 | |||
|UniProt=Q8C8D9 | |||
|association_with_transcript=0bp_to_ENSMUST00000128558,uc007ioy.1_5end | |||
|description=CAGE_peak_7_at_Sgcd_5end | |||
|id=chr11:47802464..47802482,- | |||
|ontology_enrichment_celltype=CL:0000540!7.95e-11!33;CL:0000047!7.95e-11!33;CL:0000031!7.95e-11!33;CL:0000404!7.95e-11!33;CL:0000117!1.17e-09!23;CL:0000337!1.17e-09!23;CL:0000393!2.61e-07!39;CL:0000211!2.61e-07!39;CL:0000221!5.19e-07!44;CL:0000133!5.19e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.53e-13,23;CL:0000337,7.53e-13,23;CL:0000540,1.78e-11,33;CL:0000047,1.78e-11,33;CL:0000031,1.78e-11,33;CL:0000404,1.78e-11,33;CL:0000393,5.56e-09,39;CL:0000211,5.56e-09,39;CL:0000221,1.20e-08,44;CL:0000133,1.20e-08,44;CL:0002319,1.01e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.32e-17!73;UBERON:0005743!9.32e-17!73;UBERON:0000073!4.04e-16!75;UBERON:0001016!4.04e-16!75;UBERON:0002346!4.22e-13!71;UBERON:0003075!4.22e-13!71;UBERON:0007284!4.22e-13!71;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0001049!1.29e-12!52;UBERON:0005068!1.29e-12!52;UBERON:0006241!1.29e-12!52;UBERON:0007135!1.29e-12!52;UBERON:0000955!2.89e-11!50;UBERON:0006238!2.89e-11!50;UBERON:0000033!3.65e-11!63;UBERON:0002616!1.05e-10!49;UBERON:0002020!1.26e-09!34;UBERON:0003080!3.83e-08!40;UBERON:0003056!5.82e-08!49;UBERON:0002780!1.47e-07!39;UBERON:0001890!1.47e-07!39;UBERON:0006240!1.47e-07!39;UBERON:0002791!7.94e-07!29;UBERON:0003528!7.94e-07!29;UBERON:0001893!7.94e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.40e-18,73;UBERON:0001016,3.46e-17,75;UBERON:0000073,1.44e-14,54;UBERON:0001049,6.44e-14,52;UBERON:0005068,6.44e-14,52;UBERON:0006241,6.44e-14,52;UBERON:0007135,6.44e-14,52;UBERON:0004121,1.27e-13,95;UBERON:0000924,1.27e-13,95;UBERON:0006601,1.27e-13,95;UBERON:0003076,1.96e-12,12;UBERON:0003057,1.96e-12,12;UBERON:0002346,6.70e-12,64;UBERON:0003075,6.70e-12,64;UBERON:0007284,6.70e-12,64;UBERON:0010371,1.06e-11,73;UBERON:0002240,5.76e-10,6;UBERON:0005174,5.76e-10,6;UBERON:0001137,5.76e-10,6;UBERON:0000955,3.12e-09,47;UBERON:0006238,3.12e-09,47;UBERON:0002020,1.22e-08,34;UBERON:0001948,1.47e-08,5;UBERON:0002315,1.47e-08,5;UBERON:0002616,2.10e-08,46;UBERON:0010314,1.05e-07,92;UBERON:0002950,1.49e-07,4;UBERON:0001891,1.49e-07,4;UBERON:0009616,1.49e-07,4;UBERON:0010286,1.49e-07,4;UBERON:0002420,9.23e-07,8;UBERON:0007245,9.23e-07,8;UBERON:0010009,9.23e-07,8;UBERON:0010011,9.23e-07,8;UBERON:0000454,9.23e-07,8 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0.287536413054709,0.919218786610021,7.70811166995721,1.65993539510744,0.921639199537461,1.31886287730194,0.914876436024097,1.04182674111352,1.3959149950069,5.06486349028512,2.29197371665215,2.94628585473668,2.27794689278565,2.42319279572891,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,3.56059401582874,0,0,0,0,3.74476598512057,2.28750301409313,0.753926112677186,3.30266208365325,3.3243009452943,2.49345653471472,2.75810147215188,1.12023300235348,0.124406970610093,0.252722758433675,0,1.04096354370163,0.459804208866946,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,2.11141348996739,1.7535658594206,1.11218899690239,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,0,0,0.387904974335251,0.280543279561274,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.488894929326078,0,0.704070744865506,0.502518772325447,0.952174563544055,0.195133647857799,0.945810864637146,0.8858587585951,0.318909537314974,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,1.11399337041197,0.283076530788832,0,0.292255857911312,0.395287777946524,1.92792789853084,0.283880170416537,0.35613120733451,0.81443479676788,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,1.78368817602071,0.987294123612726,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.01659733563424,0.432021363287205,0.627264888043406,0,0.539457385539283,0.330613822901344,0,0,0,0,1.04661582230785,1.15820943319968,2.33341426012857,1.6790777052105,1.85851738039856,1.29092962510329,0.13020438484395,0.629156066554265,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.453142408984205,0,0.207574695168353,0.399024873401031,1.02440163452481,1.94485373654635,0.838452650511929,0.367687016900028,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,1.50901073108861,1.03005658216871,0.960377286073039,1.32101578597911,0.952587382566147,1.0429589335037,0.964546102318525,0,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,1.2234219453993,0.846146078916765,0.914639864363863,0.526139422875686,0.679020569229309,0,1.18635018124174,0.788035859004508,1.22769312950907,0.77468420592983,0.964533054905707,1.24905288968973,0.233931608445408,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p7@Sgcd | |||
}} |
Revision as of 19:45, 12 September 2013
Short description: | p7@Sgcd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sgcd_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000128558, uc007ioy.1_5end |
EntrezGene: | Sgcd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.53e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.53e-13 | 23 |
neuron | 1.78e-11 | 33 |
neuronal stem cell | 1.78e-11 | 33 |
neuroblast | 1.78e-11 | 33 |
electrically signaling cell | 1.78e-11 | 33 |
electrically responsive cell | 5.56e-09 | 39 |
electrically active cell | 5.56e-09 | 39 |
ectodermal cell | 1.20e-08 | 44 |
neurectodermal cell | 1.20e-08 | 44 |
neural cell | 1.01e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.