FFCP PHASE1:Mm9::chr5:138048130..138048149,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=188|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:138048130..138048149,-|id=chr5:138048130..138048149,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.64e-26,6;CL:0000187,1.64e-26,6;CL:0000056,1.64e-26,6;CL:0000222,1.15e-22,7;CL:0000355,1.58e-17,9;CL:0002494,2.43e-14,3;CL:0000737,2.43e-14,3;CL:0000746,2.43e-14,3;CL:0000513,2.43e-14,3;CL:0000192,8.06e-14,3;CL:0000359,8.06e-14,3;CL:0002539,8.06e-14,3;CL:0000514,8.06e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.58e-17,9;UBERON:0002036,1.58e-17,9;UBERON:0002385,1.58e-17,9;UBERON:0000486,1.58e-17,9;UBERON:0007503,1.58e-17,9;UBERON:0001015,1.58e-17,9;UBERON:0002329,1.58e-17,9;UBERON:0003082,1.58e-17,9;UBERON:0003059,1.58e-17,9;UBERON:0007282,1.58e-17,9;UBERON:0004290,1.58e-17,9;UBERON:0009618,1.58e-17,9;UBERON:0000383,1.00e-15,10;UBERON:0007524,2.98e-14,11;UBERON:0003077,2.98e-14,11;UBERON:0007285,2.98e-14,11;UBERON:0001135,8.06e-14,3;UBERON:0004237,8.06e-14,3;UBERON:0004695,8.06e-14,3;UBERON:0002111,8.06e-14,3;UBERON:0004178,8.06e-14,3;UBERON:0002204,4.68e-12,32;UBERON:0000947,1.72e-10,4;UBERON:0001637,1.72e-10,4;UBERON:0004573,1.72e-10,4;UBERON:0003509,1.72e-10,4;UBERON:0004571,1.72e-10,4;UBERON:0010191,1.72e-10,4;UBERON:0004572,1.72e-10,4;UBERON:0000981,4.11e-10,4;UBERON:0003608,4.11e-10,4;UBERON:0003826,4.11e-10,4;UBERON:0008202,4.11e-10,4;UBERON:0004381,4.11e-10,4;UBERON:0007273,4.11e-10,4;UBERON:0010912,4.11e-10,4;UBERON:0002513,4.11e-10,4;UBERON:0004375,4.11e-10,4;UBERON:0010740,4.11e-10,4;UBERON:0010363,4.11e-10,4;UBERON:0003860,4.11e-10,4;UBERON:0002428,4.11e-10,4;UBERON:0010742,4.11e-10,4;UBERON:0002495,4.11e-10,4;UBERON:0003464,4.11e-10,4;UBERON:0003606,4.11e-10,4;UBERON:0005893,4.11e-10,4;UBERON:0009749,4.11e-10,4;UBERON:0010712,4.11e-10,4;UBERON:0010886,4.11e-10,4;UBERON:0005254,4.11e-10,4;UBERON:0010885,4.11e-10,4;UBERON:0010881,4.11e-10,4;UBERON:0010882,4.11e-10,4;UBERON:0007844,4.11e-10,4;UBERON:0001441,4.11e-10,4;UBERON:0011249,4.11e-10,4;UBERON:0002091,4.11e-10,4;UBERON:0003285,4.11e-10,4;UBERON:0004288,4.11e-10,4;UBERON:0010129,4.11e-10,4;UBERON:0006234,4.11e-10,4;UBERON:0000055,1.75e-08,5;UBERON:0007500,1.75e-08,5;UBERON:0001981,1.75e-08,5;UBERON:0002049,1.75e-08,5;UBERON:0007798,1.75e-08,5;UBERON:0004537,1.75e-08,5;UBERON:0006965,1.75e-08,5;UBERON:0003104,3.12e-08,61;UBERON:0009142,3.12e-08,61;UBERON:0005418,3.48e-08,5;UBERON:0002472,3.48e-08,5;UBERON:0008784,3.48e-08,5;UBERON:0006058,3.48e-08,5;UBERON:0004709,3.48e-08,5;UBERON:0002529,3.48e-08,5;UBERON:0010538,3.48e-08,5;UBERON:0005420,3.48e-08,5;UBERON:0010758,3.48e-08,5;UBERON:0000978,3.48e-08,5;UBERON:0002103,3.48e-08,5;UBERON:0000376,3.48e-08,5;UBERON:0000154,3.48e-08,5;UBERON:0010709,3.48e-08,5;UBERON:0005730,3.48e-08,5;UBERON:0000075,6.80e-07,6;UBERON:0005856,6.80e-07,6;UBERON:0005866,6.80e-07,6;UBERON:0005863,6.80e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,3.4468156614635,1.28482726513177,2.34717403304412,0.218025156380447,0.219686182734472,0,0.839918529752175,0,0,0,0,4.11615097657515,4.29800159908135,2.06268836910977,0,0,0,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,1.87473354835864,1.29893002301434,2.82671659608272,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,1.7813056687779,0.173485326766136,0.608930956624282,1.84492397804847,0.904335843315735,0.470354828542819,0.251333182659351,0,0.433798070759735,0,1.29413479957927,1.76673214768315,2.42437626567611,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0.420883711772948,0,0,0,0.60281927134286,0.0680364991513279,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.771335564436891,0.465067889500816,0,0.233530684734339,0.16455984991348,0.820837320395476,0.324275238183423,0.438599962275997,0,0.402619256281115,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0.491804836130026,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.484393280087717,0.0603129249281559,0,0.328281799490123,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,0.158167996790568,0,0.324016022465404,0,0,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.496375471371293,0,0.516639293910924,1.68956125490778,0.938857909166032,0.781226309063701,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.29551344712669,0.409231043169689,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.956441660344217,0.661774257358546,0.463735671240843|short_description=p@chr5:138048130..138048149,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=188 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:138048130..138048149,- | |||
|id=chr5:138048130..138048149,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.64e-26,6;CL:0000187,1.64e-26,6;CL:0000056,1.64e-26,6;CL:0000222,1.15e-22,7;CL:0000355,1.58e-17,9;CL:0002494,2.43e-14,3;CL:0000737,2.43e-14,3;CL:0000746,2.43e-14,3;CL:0000513,2.43e-14,3;CL:0000192,8.06e-14,3;CL:0000359,8.06e-14,3;CL:0002539,8.06e-14,3;CL:0000514,8.06e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.58e-17,9;UBERON:0002036,1.58e-17,9;UBERON:0002385,1.58e-17,9;UBERON:0000486,1.58e-17,9;UBERON:0007503,1.58e-17,9;UBERON:0001015,1.58e-17,9;UBERON:0002329,1.58e-17,9;UBERON:0003082,1.58e-17,9;UBERON:0003059,1.58e-17,9;UBERON:0007282,1.58e-17,9;UBERON:0004290,1.58e-17,9;UBERON:0009618,1.58e-17,9;UBERON:0000383,1.00e-15,10;UBERON:0007524,2.98e-14,11;UBERON:0003077,2.98e-14,11;UBERON:0007285,2.98e-14,11;UBERON:0001135,8.06e-14,3;UBERON:0004237,8.06e-14,3;UBERON:0004695,8.06e-14,3;UBERON:0002111,8.06e-14,3;UBERON:0004178,8.06e-14,3;UBERON:0002204,4.68e-12,32;UBERON:0000947,1.72e-10,4;UBERON:0001637,1.72e-10,4;UBERON:0004573,1.72e-10,4;UBERON:0003509,1.72e-10,4;UBERON:0004571,1.72e-10,4;UBERON:0010191,1.72e-10,4;UBERON:0004572,1.72e-10,4;UBERON:0000981,4.11e-10,4;UBERON:0003608,4.11e-10,4;UBERON:0003826,4.11e-10,4;UBERON:0008202,4.11e-10,4;UBERON:0004381,4.11e-10,4;UBERON:0007273,4.11e-10,4;UBERON:0010912,4.11e-10,4;UBERON:0002513,4.11e-10,4;UBERON:0004375,4.11e-10,4;UBERON:0010740,4.11e-10,4;UBERON:0010363,4.11e-10,4;UBERON:0003860,4.11e-10,4;UBERON:0002428,4.11e-10,4;UBERON:0010742,4.11e-10,4;UBERON:0002495,4.11e-10,4;UBERON:0003464,4.11e-10,4;UBERON:0003606,4.11e-10,4;UBERON:0005893,4.11e-10,4;UBERON:0009749,4.11e-10,4;UBERON:0010712,4.11e-10,4;UBERON:0010886,4.11e-10,4;UBERON:0005254,4.11e-10,4;UBERON:0010885,4.11e-10,4;UBERON:0010881,4.11e-10,4;UBERON:0010882,4.11e-10,4;UBERON:0007844,4.11e-10,4;UBERON:0001441,4.11e-10,4;UBERON:0011249,4.11e-10,4;UBERON:0002091,4.11e-10,4;UBERON:0003285,4.11e-10,4;UBERON:0004288,4.11e-10,4;UBERON:0010129,4.11e-10,4;UBERON:0006234,4.11e-10,4;UBERON:0000055,1.75e-08,5;UBERON:0007500,1.75e-08,5;UBERON:0001981,1.75e-08,5;UBERON:0002049,1.75e-08,5;UBERON:0007798,1.75e-08,5;UBERON:0004537,1.75e-08,5;UBERON:0006965,1.75e-08,5;UBERON:0003104,3.12e-08,61;UBERON:0009142,3.12e-08,61;UBERON:0005418,3.48e-08,5;UBERON:0002472,3.48e-08,5;UBERON:0008784,3.48e-08,5;UBERON:0006058,3.48e-08,5;UBERON:0004709,3.48e-08,5;UBERON:0002529,3.48e-08,5;UBERON:0010538,3.48e-08,5;UBERON:0005420,3.48e-08,5;UBERON:0010758,3.48e-08,5;UBERON:0000978,3.48e-08,5;UBERON:0002103,3.48e-08,5;UBERON:0000376,3.48e-08,5;UBERON:0000154,3.48e-08,5;UBERON:0010709,3.48e-08,5;UBERON:0005730,3.48e-08,5;UBERON:0000075,6.80e-07,6;UBERON:0005856,6.80e-07,6;UBERON:0005866,6.80e-07,6;UBERON:0005863,6.80e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,3.4468156614635,1.28482726513177,2.34717403304412,0.218025156380447,0.219686182734472,0,0.839918529752175,0,0,0,0,4.11615097657515,4.29800159908135,2.06268836910977,0,0,0,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,1.87473354835864,1.29893002301434,2.82671659608272,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,1.7813056687779,0.173485326766136,0.608930956624282,1.84492397804847,0.904335843315735,0.470354828542819,0.251333182659351,0,0.433798070759735,0,1.29413479957927,1.76673214768315,2.42437626567611,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0.420883711772948,0,0,0,0.60281927134286,0.0680364991513279,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.771335564436891,0.465067889500816,0,0.233530684734339,0.16455984991348,0.820837320395476,0.324275238183423,0.438599962275997,0,0.402619256281115,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0.491804836130026,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.484393280087717,0.0603129249281559,0,0.328281799490123,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,0.158167996790568,0,0.324016022465404,0,0,0.674321731924103,0.330613822901344,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.496375471371293,0,0.516639293910924,1.68956125490778,0.938857909166032,0.781226309063701,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.29551344712669,0.409231043169689,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.956441660344217,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr5:138048130..138048149,- | |||
}} |
Revision as of 06:46, 14 September 2013
Short description: | p@chr5:138048130..138048149, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:138048130..138048149, - |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.64e-26 | 6 |
muscle cell | 1.64e-26 | 6 |
myoblast | 1.64e-26 | 6 |
mesodermal cell | 1.15e-22 | 7 |
multi-potent skeletal muscle stem cell | 1.58e-17 | 9 |
cardiocyte | 2.43e-14 | 3 |
striated muscle cell | 2.43e-14 | 3 |
cardiac muscle cell | 2.43e-14 | 3 |
cardiac muscle myoblast | 2.43e-14 | 3 |
smooth muscle cell | 8.06e-14 | 3 |
vascular associated smooth muscle cell | 8.06e-14 | 3 |
aortic smooth muscle cell | 8.06e-14 | 3 |
smooth muscle myoblast | 8.06e-14 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.