FFCP PHASE1:Hg19::chr1:151882031..151882049,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=117145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17947 | |||
|TSSclassifier=S | |||
|UniProt=F6XC58 | |||
|association_with_transcript=-53bp_to_ENST00000471464_5end | |||
|description=CAGE_peak_6_at_THEM4_5end | |||
|id=chr1:151882031..151882049,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
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| |||
|short_description=p6@THEM4 | |||
}} |
Revision as of 00:22, 12 September 2013
Short description: | p6@THEM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_THEM4_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000471464_5end |
EntrezGene: | THEM4 |
HGNC: | 17947 |
UniProt: | F6XC58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.39e-15 | 56 |
neural rod | 1.39e-15 | 56 |
future spinal cord | 1.39e-15 | 56 |
neural keel | 1.39e-15 | 56 |
regional part of nervous system | 1.08e-14 | 53 |
regional part of brain | 1.08e-14 | 53 |
adult organism | 1.13e-14 | 114 |
neurectoderm | 4.04e-12 | 86 |
neural plate | 1.27e-11 | 82 |
presumptive neural plate | 1.27e-11 | 82 |
brain | 4.09e-11 | 68 |
future brain | 4.09e-11 | 68 |
regional part of forebrain | 9.63e-11 | 41 |
forebrain | 9.63e-11 | 41 |
anterior neural tube | 9.63e-11 | 41 |
future forebrain | 9.63e-11 | 41 |
ecto-epithelium | 7.88e-10 | 104 |
telencephalon | 1.12e-09 | 34 |
brain grey matter | 1.63e-09 | 34 |
gray matter | 1.63e-09 | 34 |
central nervous system | 3.82e-09 | 81 |
pre-chordal neural plate | 2.12e-08 | 61 |
nervous system | 2.24e-08 | 89 |
cerebral hemisphere | 2.82e-08 | 32 |
regional part of telencephalon | 3.39e-08 | 32 |
regional part of cerebral cortex | 2.88e-07 | 22 |
structure with developmental contribution from neural crest | 5.38e-07 | 132 |
neocortex | 6.27e-07 | 20 |
cerebral cortex | 6.40e-07 | 25 |
pallium | 6.40e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.