FFCP PHASE1:Hg19::chr12:7342513..7342555,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5830|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9719|TSSclassifier=S|UniProt=P50542|association_with_transcript=0bp_to_ENST00000396637_5end|description=CAGE_peak_4_at_PEX5_5end|id=chr12:7342513..7342555,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000784;3.27e-12;3!CL:0002554;4.73e-08;2|ontology_enrichment_celltype_v019_2=CL:0000784,3.33e-12,3;CL:0002554,2.28e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.16e-13!34;UBERON:0001869!1.82e-13!32;UBERON:0002020!4.81e-13!34;UBERON:0003528!4.81e-13!34;UBERON:0002791!5.07e-13!33;UBERON:0003080!9.58e-13!42;UBERON:0002780!2.72e-12!41;UBERON:0001890!2.72e-12!41;UBERON:0006240!2.72e-12!41;UBERON:0000956!5.52e-12!25;UBERON:0000203!5.52e-12!25;UBERON:0002619!1.49e-11!22;UBERON:0001049!2.89e-11!57;UBERON:0005068!2.89e-11!57;UBERON:0006241!2.89e-11!57;UBERON:0007135!2.89e-11!57;UBERON:0001950!9.90e-11!20;UBERON:0002616!1.66e-10!59;UBERON:0000955!3.24e-09!69;UBERON:0006238!3.24e-09!69;UBERON:0001017!7.40e-08!82;UBERON:0003075!1.78e-07!86;UBERON:0007284!1.78e-07!86;UBERON:0007023!2.90e-07!115;UBERON:0002346!2.95e-07!90;UBERON:0005743!4.67e-07!86;UBERON:0000073!5.19e-07!94;UBERON:0001016!5.19e-07!94|ontology_enrichment_uberon_v019=UBERON:0002619;3.60e-22;22!UBERON:0001950;7.05e-21;20!UBERON:0001869;2.88e-20;32!UBERON:0000956;2.93e-19;25!UBERON:0000203;2.93e-19;25!UBERON:0001893;7.95e-19;34!UBERON:0002791;2.02e-17;32!UBERON:0003528;4.40e-16;34!UBERON:0002020;4.40e-16;34!UBERON:0002780;6.43e-16;41!UBERON:0001890;6.43e-16;41!UBERON:0000073;7.16e-08;53!UBERON:0002616;7.16e-08;53!UBERON:0001871;8.32e-08;6!UBERON:0001872;5.16e-07;5!UBERON:0000955;7.12e-07;68!UBERON:0002021;8.89e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.12e-22,32;UBERON:0002619,3.19e-22,22;UBERON:0001893,3.76e-21,34;UBERON:0001950,7.42e-21,20;UBERON:0002791,9.99e-20,32;UBERON:0000956,2.63e-19,25;UBERON:0000203,2.63e-19,25;UBERON:0002780,3.06e-19,41;UBERON:0001890,3.06e-19,41;UBERON:0003080,3.06e-19,41;UBERON:0006240,3.06e-19,41;UBERON:0003528,2.17e-18,34;UBERON:0002020,2.17e-18,34;UBERON:0000073,4.90e-14,53;UBERON:0002616,4.90e-14,53;UBERON:0001049,4.41e-13,56;UBERON:0005068,4.41e-13,56;UBERON:0006241,4.41e-13,56;UBERON:0007135,4.41e-13,56;UBERON:0003056,1.06e-11,61;UBERON:0000955,2.39e-11,68;UBERON:0006238,2.39e-11,68;UBERON:0003075,3.27e-10,82;UBERON:0007284,3.27e-10,82;UBERON:0001017,4.24e-10,81;UBERON:0002346,1.54e-09,86;UBERON:0001016,1.11e-08,89;UBERON:0010371,4.08e-08,104;UBERON:0001871,1.07e-07,6;UBERON:0010314,4.84e-07,132;UBERON:0002021,5.59e-07,5;UBERON:0001872,8.53e-07,5|phase1_expression=0,0.642301571672949,1.69145284915165,0,2.68176656656373,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.502170558379211,0.229240217243854,0.246301768349837,0.157421562627358,0,0.383829398097213,0,1.83884244895785,0,0,7.35938405512865,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.639312809217652,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.458426764241994,0.728590576585084,0,0,0,0,4.05434061319081,6.86393892936153,11.8866400425461,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0,1.31780417436063,0,0,0,0.379891534993739,0.794455084879313,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0.468642863667593,1.5608003841516,0,1.49448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.247266929278557,1.82032272387605,2.87447256726495,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0.423863802319124,1.20036438433761,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.584622030967192,0.757301322732344,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0.573609190778008,0.243947412259191,0.132529768321485,0.232387885739037,0.518305275076852,0,1.09493207722749,0,0,0,0.464367928031979,1.44375896333917,0.118306800039844,0.674338760312407,0.482022059766964,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0.588664395376038,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5830 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9719 | |||
|TSSclassifier=S | |||
|UniProt=P50542 | |||
|association_with_transcript=0bp_to_ENST00000396637_5end | |||
|description=CAGE_peak_4_at_PEX5_5end | |||
|id=chr12:7342513..7342555,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.27e-12;3!CL:0002554;4.73e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.33e-12,3;CL:0002554,2.28e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.16e-13!34;UBERON:0001869!1.82e-13!32;UBERON:0002020!4.81e-13!34;UBERON:0003528!4.81e-13!34;UBERON:0002791!5.07e-13!33;UBERON:0003080!9.58e-13!42;UBERON:0002780!2.72e-12!41;UBERON:0001890!2.72e-12!41;UBERON:0006240!2.72e-12!41;UBERON:0000956!5.52e-12!25;UBERON:0000203!5.52e-12!25;UBERON:0002619!1.49e-11!22;UBERON:0001049!2.89e-11!57;UBERON:0005068!2.89e-11!57;UBERON:0006241!2.89e-11!57;UBERON:0007135!2.89e-11!57;UBERON:0001950!9.90e-11!20;UBERON:0002616!1.66e-10!59;UBERON:0000955!3.24e-09!69;UBERON:0006238!3.24e-09!69;UBERON:0001017!7.40e-08!82;UBERON:0003075!1.78e-07!86;UBERON:0007284!1.78e-07!86;UBERON:0007023!2.90e-07!115;UBERON:0002346!2.95e-07!90;UBERON:0005743!4.67e-07!86;UBERON:0000073!5.19e-07!94;UBERON:0001016!5.19e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.60e-22;22!UBERON:0001950;7.05e-21;20!UBERON:0001869;2.88e-20;32!UBERON:0000956;2.93e-19;25!UBERON:0000203;2.93e-19;25!UBERON:0001893;7.95e-19;34!UBERON:0002791;2.02e-17;32!UBERON:0003528;4.40e-16;34!UBERON:0002020;4.40e-16;34!UBERON:0002780;6.43e-16;41!UBERON:0001890;6.43e-16;41!UBERON:0000073;7.16e-08;53!UBERON:0002616;7.16e-08;53!UBERON:0001871;8.32e-08;6!UBERON:0001872;5.16e-07;5!UBERON:0000955;7.12e-07;68!UBERON:0002021;8.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.12e-22,32;UBERON:0002619,3.19e-22,22;UBERON:0001893,3.76e-21,34;UBERON:0001950,7.42e-21,20;UBERON:0002791,9.99e-20,32;UBERON:0000956,2.63e-19,25;UBERON:0000203,2.63e-19,25;UBERON:0002780,3.06e-19,41;UBERON:0001890,3.06e-19,41;UBERON:0003080,3.06e-19,41;UBERON:0006240,3.06e-19,41;UBERON:0003528,2.17e-18,34;UBERON:0002020,2.17e-18,34;UBERON:0000073,4.90e-14,53;UBERON:0002616,4.90e-14,53;UBERON:0001049,4.41e-13,56;UBERON:0005068,4.41e-13,56;UBERON:0006241,4.41e-13,56;UBERON:0007135,4.41e-13,56;UBERON:0003056,1.06e-11,61;UBERON:0000955,2.39e-11,68;UBERON:0006238,2.39e-11,68;UBERON:0003075,3.27e-10,82;UBERON:0007284,3.27e-10,82;UBERON:0001017,4.24e-10,81;UBERON:0002346,1.54e-09,86;UBERON:0001016,1.11e-08,89;UBERON:0010371,4.08e-08,104;UBERON:0001871,1.07e-07,6;UBERON:0010314,4.84e-07,132;UBERON:0002021,5.59e-07,5;UBERON:0001872,8.53e-07,5 | |||
|phase1_expression=0,0.642301571672949,1.69145284915165,0,2.68176656656373,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.502170558379211,0.229240217243854,0.246301768349837,0.157421562627358,0,0.383829398097213,0,1.83884244895785,0,0,7.35938405512865,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.639312809217652,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.458426764241994,0.728590576585084,0,0,0,0,4.05434061319081,6.86393892936153,11.8866400425461,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0,1.31780417436063,0,0,0,0.379891534993739,0.794455084879313,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0.468642863667593,1.5608003841516,0,1.49448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.247266929278557,1.82032272387605,2.87447256726495,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0.423863802319124,1.20036438433761,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.584622030967192,0.757301322732344,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0.573609190778008,0.243947412259191,0.132529768321485,0.232387885739037,0.518305275076852,0,1.09493207722749,0,0,0,0.464367928031979,1.44375896333917,0.118306800039844,0.674338760312407,0.482022059766964,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0.588664395376038,0.769494313892781,0,0,0.4115740113314,0,0,0,0.590789906681404,1.7658523976586,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.576479813667846,0.50496973370552,0,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.224262168690721,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.670065061337395,0,0,0,0,0.36807447515742,0,0,0.623912584592421,0,0,0.702848489956279,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0.909382714338778,0,0.30239029332968,0.496215615637554,0,0.280660094433074,0.512556597022804,0.511707249066704,0.482561763430822,1.48418066444991,0.771048469013278,0.710246901252508,0.0821271560138091,0,0.697262270759755,0.483437798366489,0.40101294060657,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0.193341436584244,0.462145851343933,0.614014698904518,0.551346289938122,0.214840489736547,0.290033387828457,0.340906509664404,0.267096106940212,0.330569830721956,0.384380134730212,0.255225424989168,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0,1.73986598415015,0.37064843820784,0.286249773483982,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0.606547444719948,1.58510321173008,0.421258456238981,0,0.731140468893853,1.05650146756755,0.682499557039929,0.141405431953713,5.65040583101214,0,0.66343897524122,2.19225442626881,0.578775534266688,0.655894752046633,0,0,0,0.430234056612155,0,0.35667105148125,0.354761064070598,0,1.31717957183961,0,0,0,0,1.08890984861323,0.0941438007767792,0.86101074534246,0,0,0,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0.106824071127473,0,0,0.743212700502875,0.28853842595289,1.20941133692304,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0,0.313359791546046,0,0.677167111206413,0.1605880751037,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0.71623345421307,0,0.307160702099232,0.994147647766298,0.703347082052564,0,0.824019371133798,0.211125408127993,0,0.552567831062295,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.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| |||
|short_description=p4@PEX5 | |||
}} |
Revision as of 00:25, 11 September 2013
Short description: | p4@PEX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PEX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396637_5end |
EntrezGene: | PEX5 |
HGNC: | 9719 |
UniProt: | P50542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.33e-12 | 3 |
fibroblast of lymphatic vessel | 2.28e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.12e-22 | 32 |
regional part of cerebral cortex | 3.19e-22 | 22 |
telencephalon | 3.76e-21 | 34 |
neocortex | 7.42e-21 | 20 |
regional part of telencephalon | 9.99e-20 | 32 |
cerebral cortex | 2.63e-19 | 25 |
pallium | 2.63e-19 | 25 |
regional part of forebrain | 3.06e-19 | 41 |
forebrain | 3.06e-19 | 41 |
anterior neural tube | 3.06e-19 | 41 |
future forebrain | 3.06e-19 | 41 |
brain grey matter | 2.17e-18 | 34 |
gray matter | 2.17e-18 | 34 |
regional part of nervous system | 4.90e-14 | 53 |
regional part of brain | 4.90e-14 | 53 |
neural tube | 4.41e-13 | 56 |
neural rod | 4.41e-13 | 56 |
future spinal cord | 4.41e-13 | 56 |
neural keel | 4.41e-13 | 56 |
pre-chordal neural plate | 1.06e-11 | 61 |
brain | 2.39e-11 | 68 |
future brain | 2.39e-11 | 68 |
neural plate | 3.27e-10 | 82 |
presumptive neural plate | 3.27e-10 | 82 |
central nervous system | 4.24e-10 | 81 |
neurectoderm | 1.54e-09 | 86 |
nervous system | 1.11e-08 | 89 |
ecto-epithelium | 4.08e-08 | 104 |
temporal lobe | 1.07e-07 | 6 |
structure with developmental contribution from neural crest | 4.84e-07 | 132 |
occipital lobe | 5.59e-07 | 5 |
parietal lobe | 8.53e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.