FFCP PHASE1:Hg19::chr2:242556880..242556899,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23187|TSSclassifier=S|UniProt=B5MCC0|association_with_transcript=5bp_to_ENST00000402545_5end|description=CAGE_peak_5_at_THAP4_5end|id=chr2:242556880..242556899,-|ontology_enrichment_celltype=CL:0000542!1.47e-11!53;CL:0000051!1.47e-11!53;CL:0000838!2.28e-11!52;CL:0000084!7.94e-07!25;CL:0000827!7.94e-07!25|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.88e-45!115;UBERON:0001049!7.07e-16!57;UBERON:0005068!7.07e-16!57;UBERON:0006241!7.07e-16!57;UBERON:0007135!7.07e-16!57;UBERON:0003080!1.11e-12!42;UBERON:0002780!1.92e-12!41;UBERON:0001890!1.92e-12!41;UBERON:0006240!1.92e-12!41;UBERON:0002616!3.05e-12!59;UBERON:0002020!3.73e-10!34;UBERON:0003528!3.73e-10!34;UBERON:0001893!9.23e-10!34;UBERON:0001017!1.35e-09!82;UBERON:0003075!1.47e-09!86;UBERON:0007284!1.47e-09!86;UBERON:0001869!2.51e-09!32;UBERON:0000955!2.64e-09!69;UBERON:0006238!2.64e-09!69;UBERON:0002791!2.85e-09!33;UBERON:0002346!6.23e-09!90;UBERON:0005743!7.08e-09!86;UBERON:0002619!3.75e-08!22;UBERON:0001950!2.95e-07!20;UBERON:0000073!7.64e-07!94;UBERON:0001016!7.64e-07!94|ontology_enrichment_uberon_v019=UBERON:0007023;2.78e-12;114!UBERON:0002780;7.01e-12;41!UBERON:0001890;7.01e-12;41!UBERON:0001893;1.32e-11;34!UBERON:0001869;1.73e-11;32!UBERON:0002619;2.67e-11;22!UBERON:0003528;3.06e-11;34!UBERON:0002020;3.06e-11;34!UBERON:0000073;4.20e-11;53!UBERON:0002616;4.20e-11;53!UBERON:0002791;1.59e-10;32!UBERON:0001950;4.87e-10;20!UBERON:0000956;2.15e-09;25!UBERON:0000203;2.15e-09;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-39,114;UBERON:0000073,2.85e-19,53;UBERON:0002616,2.85e-19,53;UBERON:0001049,8.74e-19,56;UBERON:0005068,8.74e-19,56;UBERON:0006241,8.74e-19,56;UBERON:0007135,8.74e-19,56;UBERON:0002780,4.75e-16,41;UBERON:0001890,4.75e-16,41;UBERON:0003080,4.75e-16,41;UBERON:0006240,4.75e-16,41;UBERON:0003528,2.02e-13,34;UBERON:0002020,2.02e-13,34;UBERON:0000955,3.53e-13,68;UBERON:0006238,3.53e-13,68;UBERON:0001869,5.20e-13,32;UBERON:0001893,7.44e-13,34;UBERON:0003075,6.66e-12,82;UBERON:0007284,6.66e-12,82;UBERON:0001017,9.35e-12,81;UBERON:0002791,1.07e-11,32;UBERON:0002346,1.82e-11,86;UBERON:0002619,1.95e-11,22;UBERON:0001950,4.29e-10,20;UBERON:0000956,1.64e-09,25;UBERON:0000203,1.64e-09,25;UBERON:0001016,1.80e-09,89;UBERON:0010371,8.40e-09,104;UBERON:0010314,2.03e-08,132;UBERON:0011216,2.43e-08,223;UBERON:0003056,4.97e-08,61|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.57470412614962,0.393553906568396,0.393364276848904,1.91914699048606,0,0,0,0,0.852139206383318,0,2.34880351467878,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0,0,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0.868755378820466,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0.570025487482497,0,0.182664153764634,1.75996244461323,2.18455444504853,0.889509253863555,1.70692089026603,3.2031678962881,3.4485146397269,1.98313461835459,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0.393419540227666,0.786021525498329,2.46721798799411,5.85152733867373,0.977766799900771,3.78758244587787,1.94826728407911,6.68462741311041,5.30290633454707,3.54454231333794,3.5204502289452,7.68547918354051,7.28332346335318,3.78207180588455,2.76350017785848,1.73881851441031,0.593146252648242,1.07016331235885,0,2.71942422474159,3.06576394881537,3.09264700934367,2.53019692019503,1.91139248594458,3.90650072313851,4.75226022224187,1.05402583354441,0.895906278080929,0,0.473554504088034,1.64225599384209,0.80642697289893,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,4.12584087817795,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0,0.805658634218294,0.760272105718513,1.70843440283719,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,1.3082821564276,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,1.98794652482228,2.5562667431294,1.86589899027667,2.52320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,2.36315962672562,0.882926198829301,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0.577465791044295,0,1.14152491340759,2.37061319387782,2.57545848628462,0,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23187 | |||
|TSSclassifier=S | |||
|UniProt=B5MCC0 | |||
|association_with_transcript=5bp_to_ENST00000402545_5end | |||
|description=CAGE_peak_5_at_THAP4_5end | |||
|id=chr2:242556880..242556899,- | |||
|ontology_enrichment_celltype=CL:0000542!1.47e-11!53;CL:0000051!1.47e-11!53;CL:0000838!2.28e-11!52;CL:0000084!7.94e-07!25;CL:0000827!7.94e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-45!115;UBERON:0001049!7.07e-16!57;UBERON:0005068!7.07e-16!57;UBERON:0006241!7.07e-16!57;UBERON:0007135!7.07e-16!57;UBERON:0003080!1.11e-12!42;UBERON:0002780!1.92e-12!41;UBERON:0001890!1.92e-12!41;UBERON:0006240!1.92e-12!41;UBERON:0002616!3.05e-12!59;UBERON:0002020!3.73e-10!34;UBERON:0003528!3.73e-10!34;UBERON:0001893!9.23e-10!34;UBERON:0001017!1.35e-09!82;UBERON:0003075!1.47e-09!86;UBERON:0007284!1.47e-09!86;UBERON:0001869!2.51e-09!32;UBERON:0000955!2.64e-09!69;UBERON:0006238!2.64e-09!69;UBERON:0002791!2.85e-09!33;UBERON:0002346!6.23e-09!90;UBERON:0005743!7.08e-09!86;UBERON:0002619!3.75e-08!22;UBERON:0001950!2.95e-07!20;UBERON:0000073!7.64e-07!94;UBERON:0001016!7.64e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.78e-12;114!UBERON:0002780;7.01e-12;41!UBERON:0001890;7.01e-12;41!UBERON:0001893;1.32e-11;34!UBERON:0001869;1.73e-11;32!UBERON:0002619;2.67e-11;22!UBERON:0003528;3.06e-11;34!UBERON:0002020;3.06e-11;34!UBERON:0000073;4.20e-11;53!UBERON:0002616;4.20e-11;53!UBERON:0002791;1.59e-10;32!UBERON:0001950;4.87e-10;20!UBERON:0000956;2.15e-09;25!UBERON:0000203;2.15e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-39,114;UBERON:0000073,2.85e-19,53;UBERON:0002616,2.85e-19,53;UBERON:0001049,8.74e-19,56;UBERON:0005068,8.74e-19,56;UBERON:0006241,8.74e-19,56;UBERON:0007135,8.74e-19,56;UBERON:0002780,4.75e-16,41;UBERON:0001890,4.75e-16,41;UBERON:0003080,4.75e-16,41;UBERON:0006240,4.75e-16,41;UBERON:0003528,2.02e-13,34;UBERON:0002020,2.02e-13,34;UBERON:0000955,3.53e-13,68;UBERON:0006238,3.53e-13,68;UBERON:0001869,5.20e-13,32;UBERON:0001893,7.44e-13,34;UBERON:0003075,6.66e-12,82;UBERON:0007284,6.66e-12,82;UBERON:0001017,9.35e-12,81;UBERON:0002791,1.07e-11,32;UBERON:0002346,1.82e-11,86;UBERON:0002619,1.95e-11,22;UBERON:0001950,4.29e-10,20;UBERON:0000956,1.64e-09,25;UBERON:0000203,1.64e-09,25;UBERON:0001016,1.80e-09,89;UBERON:0010371,8.40e-09,104;UBERON:0010314,2.03e-08,132;UBERON:0011216,2.43e-08,223;UBERON:0003056,4.97e-08,61 | |||
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| |||
|short_description=p5@THAP4 | |||
}} |
Revision as of 17:52, 12 September 2013
Short description: | p5@THAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_THAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000402545_5end |
EntrezGene: | THAP4 |
HGNC: | 23187 |
UniProt: | B5MCC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-39 | 114 |
regional part of nervous system | 2.85e-19 | 53 |
regional part of brain | 2.85e-19 | 53 |
neural tube | 8.74e-19 | 56 |
neural rod | 8.74e-19 | 56 |
future spinal cord | 8.74e-19 | 56 |
neural keel | 8.74e-19 | 56 |
regional part of forebrain | 4.75e-16 | 41 |
forebrain | 4.75e-16 | 41 |
anterior neural tube | 4.75e-16 | 41 |
future forebrain | 4.75e-16 | 41 |
brain grey matter | 2.02e-13 | 34 |
gray matter | 2.02e-13 | 34 |
brain | 3.53e-13 | 68 |
future brain | 3.53e-13 | 68 |
cerebral hemisphere | 5.20e-13 | 32 |
telencephalon | 7.44e-13 | 34 |
neural plate | 6.66e-12 | 82 |
presumptive neural plate | 6.66e-12 | 82 |
central nervous system | 9.35e-12 | 81 |
regional part of telencephalon | 1.07e-11 | 32 |
neurectoderm | 1.82e-11 | 86 |
regional part of cerebral cortex | 1.95e-11 | 22 |
neocortex | 4.29e-10 | 20 |
cerebral cortex | 1.64e-09 | 25 |
pallium | 1.64e-09 | 25 |
nervous system | 1.80e-09 | 89 |
ecto-epithelium | 8.40e-09 | 104 |
structure with developmental contribution from neural crest | 2.03e-08 | 132 |
organ system subdivision | 2.43e-08 | 223 |
pre-chordal neural plate | 4.97e-08 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.