FFCP PHASE1:Hg19::chr3:45067739..45067785,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7123|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11891|TSSclassifier=S|UniProt=P05452|association_with_transcript=0bp_to_NM_003278,uc003cok.3_5end|coexpression_cluster_id=C1016|description=CAGE_peak_2_at_CLEC3B_5end|id=chr3:45067739..45067785,+|ontology_enrichment_celltype=CL:0000057!1.86e-11!75;CL:0000055!1.75e-09!180;CL:0000136!5.02e-09!15;CL:0002620!4.00e-07!23|ontology_enrichment_celltype_v019=CL:0000136;4.66e-09;13!CL:0002620;3.00e-07;23|ontology_enrichment_celltype_v019_2=CL:0000057,2.63e-10,76;CL:0000136,7.11e-10,15;CL:0002620,2.77e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.21e-30!115;UBERON:0000475!1.35e-13!365;UBERON:0002616!1.79e-13!59;UBERON:0001049!3.08e-12!57;UBERON:0005068!3.08e-12!57;UBERON:0006241!3.08e-12!57;UBERON:0007135!3.08e-12!57;UBERON:0000955!9.50e-12!69;UBERON:0006238!9.50e-12!69;UBERON:0001017!6.13e-11!82;UBERON:0005743!3.66e-10!86;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000033!3.20e-09!123;UBERON:0000481!5.07e-09!347;UBERON:0003080!6.82e-09!42;UBERON:0000073!1.33e-08!94;UBERON:0001016!1.33e-08!94;UBERON:0000468!1.43e-08!659;UBERON:0000062!2.32e-08!511;UBERON:0004121!2.35e-08!169;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0003075!2.87e-08!86;UBERON:0007284!2.87e-08!86;UBERON:0000924!7.18e-08!173;UBERON:0006601!7.18e-08!173;UBERON:0000479!1.48e-07!787;UBERON:0002346!1.56e-07!90;UBERON:0000477!4.20e-07!286;UBERON:0002020!6.34e-07!34;UBERON:0003528!6.34e-07!34;UBERON:0001893!7.26e-07!34;UBERON:0000467!8.66e-07!625|ontology_enrichment_uberon_v019=UBERON:0007023;8.06e-10;114!UBERON:0002780;4.06e-07;41!UBERON:0001890;4.06e-07;41!UBERON:0003528;8.31e-07;34!UBERON:0002020;8.31e-07;34!UBERON:0001869;9.46e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.29e-34,114;UBERON:0001049,1.81e-12,56;UBERON:0005068,1.81e-12,56;UBERON:0006241,1.81e-12,56;UBERON:0007135,1.81e-12,56;UBERON:0000955,1.10e-11,68;UBERON:0006238,1.10e-11,68;UBERON:0010314,1.26e-11,132;UBERON:0000073,2.11e-11,53;UBERON:0002616,2.11e-11,53;UBERON:0001017,6.39e-11,81;UBERON:0011216,1.64e-09,223;UBERON:0001016,1.66e-09,89;UBERON:0002780,3.02e-09,41;UBERON:0001890,3.02e-09,41;UBERON:0003080,3.02e-09,41;UBERON:0006240,3.02e-09,41;UBERON:0004121,4.69e-09,171;UBERON:0000924,4.69e-09,171;UBERON:0006601,4.69e-09,171;UBERON:0000479,6.19e-09,773;UBERON:0003075,9.53e-09,82;UBERON:0007284,9.53e-09,82;UBERON:0002346,4.52e-08,86;UBERON:0003528,1.11e-07,34;UBERON:0002020,1.11e-07,34;UBERON:0001893,1.29e-07,34;UBERON:0001869,2.89e-07,32;UBERON:0002791,3.69e-07,32;UBERON:0010371,9.30e-07,104|phase1_expression=19.6212649612201,45.1752105409974,18.0421637242843,72.0527748142539,25.9237434767827,40.127572108617,25.3299878168311,30.3225539244879,86.7136285623464,0,0,0,0,50.6204383606591,162.716111482407,0,0,0,0,0.738726348460727,1.83600622119828,5.32873026512749,0,0,4.77062030460251,0,0,0,0,0,0.154816123316076,0,0,0,0,0,5.28480790802725,0,0,0,2.01523926815932,2.91504299417082,1.80302897343931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,7.26479403160043,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0,0,0.661044872784862,3.81621501814146,0,0,0,0,1.68152568894461,3.68737718685108,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0,2.30152611318355,114.576211305908,61.1632250975785,84.3006740351994,4.7717156823066,26.764917866645,0.0945348171640679,0,0,28.6844175339991,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,1.34717623575702,0.450445921933289,0,0,0.183201743930407,0,0,0,131.697567199259,0.25326102332916,0.264818361626438,2.58152958673932,1.77334191099179,9.53151920241922,1.06748995729705,2.71334303258876,6.22422070799533,1.0776853765575,2.94231425604226,45.8613005764142,57.6175924479999,0.70296429550139,5.61888138294577,5.70471821544449,27.050211179876,0.822041490506354,3.0755859429945,2.80901613404497,12.4534044465485,2.21101771161182,11.9857906163888,2.37600571456411,13.5996811103206,10.0117749813183,11.4978902690598,1.17835279767846,2.37725187756732,11.3596287348515,33.3622991869437,29.7293161925049,21.4840424236433,1.24775401476023,7.89314397030993,108.487153519832,61.8841151385921,20.7062856298238,42.8698521631906,8.50213782150576,26.9869441680805,5.06328996723799,5.74878330451072,15.6508940031351,129.514207389715,24.893492750097,17.0404604407975,3.72782763442269,12.8866050155971,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,3.21620469096443,1.38134921352481,71.9770288449567,257.710974956042,0,0,0,0,0,0,0,0,0,4.42893272774789,1.40241773803446,1.2347220339942,1.47008711385542,2.53510069643662,0.982827216677626,21.859226547212,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7123 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11891 | |||
|TSSclassifier=S | |||
|UniProt=P05452 | |||
|association_with_transcript=0bp_to_NM_003278,uc003cok.3_5end | |||
|coexpression_cluster_id=C1016 | |||
|description=CAGE_peak_2_at_CLEC3B_5end | |||
|id=chr3:45067739..45067785,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.86e-11!75;CL:0000055!1.75e-09!180;CL:0000136!5.02e-09!15;CL:0002620!4.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.66e-09;13!CL:0002620;3.00e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.63e-10,76;CL:0000136,7.11e-10,15;CL:0002620,2.77e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.21e-30!115;UBERON:0000475!1.35e-13!365;UBERON:0002616!1.79e-13!59;UBERON:0001049!3.08e-12!57;UBERON:0005068!3.08e-12!57;UBERON:0006241!3.08e-12!57;UBERON:0007135!3.08e-12!57;UBERON:0000955!9.50e-12!69;UBERON:0006238!9.50e-12!69;UBERON:0001017!6.13e-11!82;UBERON:0005743!3.66e-10!86;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0000033!3.20e-09!123;UBERON:0000481!5.07e-09!347;UBERON:0003080!6.82e-09!42;UBERON:0000073!1.33e-08!94;UBERON:0001016!1.33e-08!94;UBERON:0000468!1.43e-08!659;UBERON:0000062!2.32e-08!511;UBERON:0004121!2.35e-08!169;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0003075!2.87e-08!86;UBERON:0007284!2.87e-08!86;UBERON:0000924!7.18e-08!173;UBERON:0006601!7.18e-08!173;UBERON:0000479!1.48e-07!787;UBERON:0002346!1.56e-07!90;UBERON:0000477!4.20e-07!286;UBERON:0002020!6.34e-07!34;UBERON:0003528!6.34e-07!34;UBERON:0001893!7.26e-07!34;UBERON:0000467!8.66e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.06e-10;114!UBERON:0002780;4.06e-07;41!UBERON:0001890;4.06e-07;41!UBERON:0003528;8.31e-07;34!UBERON:0002020;8.31e-07;34!UBERON:0001869;9.46e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.29e-34,114;UBERON:0001049,1.81e-12,56;UBERON:0005068,1.81e-12,56;UBERON:0006241,1.81e-12,56;UBERON:0007135,1.81e-12,56;UBERON:0000955,1.10e-11,68;UBERON:0006238,1.10e-11,68;UBERON:0010314,1.26e-11,132;UBERON:0000073,2.11e-11,53;UBERON:0002616,2.11e-11,53;UBERON:0001017,6.39e-11,81;UBERON:0011216,1.64e-09,223;UBERON:0001016,1.66e-09,89;UBERON:0002780,3.02e-09,41;UBERON:0001890,3.02e-09,41;UBERON:0003080,3.02e-09,41;UBERON:0006240,3.02e-09,41;UBERON:0004121,4.69e-09,171;UBERON:0000924,4.69e-09,171;UBERON:0006601,4.69e-09,171;UBERON:0000479,6.19e-09,773;UBERON:0003075,9.53e-09,82;UBERON:0007284,9.53e-09,82;UBERON:0002346,4.52e-08,86;UBERON:0003528,1.11e-07,34;UBERON:0002020,1.11e-07,34;UBERON:0001893,1.29e-07,34;UBERON:0001869,2.89e-07,32;UBERON:0002791,3.69e-07,32;UBERON:0010371,9.30e-07,104 | |||
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| |||
|short_description=p2@CLEC3B | |||
}} |
Revision as of 00:14, 13 September 2013
Short description: | p2@CLEC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLEC3B_5end |
Coexpression cluster: | C1016_Mesenchymal_Synoviocyte_tenocyte_lung_mesenchymal_diaphragm_breast |
Association with transcript: | 0bp_to_NM_003278, uc003cok.3_5end |
EntrezGene: | CLEC3B |
HGNC: | 11891 |
UniProt: | P05452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.63e-10 | 76 |
fat cell | 7.11e-10 | 15 |
skin fibroblast | 2.77e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.29e-34 | 114 |
neural tube | 1.81e-12 | 56 |
neural rod | 1.81e-12 | 56 |
future spinal cord | 1.81e-12 | 56 |
neural keel | 1.81e-12 | 56 |
brain | 1.10e-11 | 68 |
future brain | 1.10e-11 | 68 |
structure with developmental contribution from neural crest | 1.26e-11 | 132 |
regional part of nervous system | 2.11e-11 | 53 |
regional part of brain | 2.11e-11 | 53 |
central nervous system | 6.39e-11 | 81 |
organ system subdivision | 1.64e-09 | 223 |
nervous system | 1.66e-09 | 89 |
regional part of forebrain | 3.02e-09 | 41 |
forebrain | 3.02e-09 | 41 |
anterior neural tube | 3.02e-09 | 41 |
future forebrain | 3.02e-09 | 41 |
ectoderm-derived structure | 4.69e-09 | 171 |
ectoderm | 4.69e-09 | 171 |
presumptive ectoderm | 4.69e-09 | 171 |
tissue | 6.19e-09 | 773 |
neural plate | 9.53e-09 | 82 |
presumptive neural plate | 9.53e-09 | 82 |
neurectoderm | 4.52e-08 | 86 |
brain grey matter | 1.11e-07 | 34 |
gray matter | 1.11e-07 | 34 |
telencephalon | 1.29e-07 | 34 |
cerebral hemisphere | 2.89e-07 | 32 |
regional part of telencephalon | 3.69e-07 | 32 |
ecto-epithelium | 9.30e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.