FFCP PHASE1:Hg19::chr6:31554755..31554764,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7940|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14189|TSSclassifier=S|UniProt=Q5STB1|association_with_transcript=-21bp_to_ENST00000396107_5end|coexpression_cluster_id=C92|description=CAGE_peak_11_at_LST1_5end|id=chr6:31554755..31554764,+|ontology_enrichment_celltype=CL:0000763!3.99e-63!112;CL:0000049!3.99e-63!112;CL:0000037!2.60e-59!172;CL:0000566!2.60e-59!172;CL:0000988!2.88e-54!182;CL:0002032!1.17e-53!165;CL:0000837!1.17e-53!165;CL:0002009!1.19e-51!65;CL:0000557!2.99e-49!71;CL:0002194!7.84e-49!63;CL:0000576!7.84e-49!63;CL:0000040!7.84e-49!63;CL:0000559!7.84e-49!63;CL:0000766!2.52e-48!76;CL:0002057!6.06e-47!42;CL:0000839!1.41e-45!70;CL:0000738!2.63e-45!140;CL:0000860!8.58e-43!45;CL:0002087!1.05e-38!119;CL:0002031!1.60e-37!124;CL:0000134!7.58e-14!358;CL:0002393!4.13e-13!9;CL:0002397!4.13e-13!9;CL:0002320!4.75e-13!365;CL:0000219!2.67e-10!390;CL:0000048!3.49e-07!430;CL:0000034!5.65e-07!444;CL:0000723!9.23e-07!436|ontology_enrichment_celltype_v019=CL:0000473;1.60e-45;39!CL:0000234;1.60e-45;39!CL:0000860;2.25e-35;33!CL:0002057;2.25e-35;33!CL:0000576;2.00e-34;48!CL:0000766;9.70e-28;69!CL:0000235;1.72e-21;6!CL:0000763;5.35e-20;100!CL:0000875;1.37e-12;3!CL:0002396;1.37e-12;3!CL:0002393;3.36e-10;6!CL:0002397;3.36e-10;6!CL:0000738;1.13e-09;136!CL:0000988;1.79e-09;177!CL:0001014;8.86e-09;2!CL:0001016;8.86e-09;2!CL:0002087;2.36e-08;104|ontology_enrichment_celltype_v019_2=CL:0000473,2.17e-77,48;CL:0000234,2.17e-77,48;CL:0002009,7.91e-70,61;CL:0000763,2.48e-68,108;CL:0000049,2.48e-68,108;CL:0002194,6.86e-64,59;CL:0000576,6.86e-64,59;CL:0000040,6.86e-64,59;CL:0000559,6.86e-64,59;CL:0000557,7.60e-63,67;CL:0000860,7.62e-59,42;CL:0002057,7.62e-59,42;CL:0000766,1.68e-57,72;CL:0000839,2.77e-56,66;CL:0000037,4.72e-46,168;CL:0002032,2.10e-44,161;CL:0000837,2.10e-44,161;CL:0000988,3.72e-43,177;CL:0000738,1.22e-35,136;CL:0002087,1.36e-34,115;CL:0002031,3.34e-33,120;CL:0000235,1.11e-21,6;CL:0002393,5.34e-20,9;CL:0002397,5.34e-20,9;CL:0000134,5.54e-16,354;CL:0002320,1.88e-15,361;CL:0000219,1.38e-13,386;CL:0000875,1.37e-12,3;CL:0002396,1.37e-12,3;CL:0000034,2.57e-11,441;CL:0000048,2.64e-11,427;CL:0000723,5.45e-11,433;CL:0001014,9.95e-09,2;CL:0001016,9.95e-09,2|ontology_enrichment_development_v019=CL:0002057;5.70e-41;42!CL:0000049;1.01e-16;108|ontology_enrichment_disease=DOID:8692!5.31e-14!31;DOID:1240!8.42e-11!39;DOID:2531!2.36e-08!51;DOID:0060083!2.36e-08!51|ontology_enrichment_disease_v019=DOID:8692;1.26e-08;31|ontology_enrichment_disease_v019_2=DOID:8692,9.85e-10,31;DOID:1240,2.46e-07,39|ontology_enrichment_uberon=UBERON:0002390!3.01e-50!102;UBERON:0003061!3.01e-50!102;UBERON:0002193!1.59e-46!112;UBERON:0002371!2.81e-43!80;UBERON:0001474!7.05e-39!86;UBERON:0002405!4.89e-31!115;UBERON:0004765!3.23e-30!101;UBERON:0001434!3.23e-30!101;UBERON:0003081!2.35e-13!216;UBERON:0002384!5.66e-12!375;UBERON:0002204!2.51e-11!167;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15;UBERON:0007023!3.78e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-07;15!UBERON:0000179;1.30e-07;15!UBERON:0000463;1.30e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.39e-56,98;UBERON:0003061,4.39e-56,98;UBERON:0002371,2.06e-54,76;UBERON:0002193,5.33e-50,108;UBERON:0001474,8.31e-50,82;UBERON:0004765,1.30e-44,90;UBERON:0002405,6.83e-43,93;UBERON:0001434,2.82e-39,100;UBERON:0003081,5.80e-22,203;UBERON:0002204,5.88e-20,167;UBERON:0002384,9.91e-15,371;UBERON:0000926,1.23e-10,315;UBERON:0004120,1.23e-10,315;UBERON:0006603,1.23e-10,315;UBERON:0000178,1.83e-07,15;UBERON:0000179,1.83e-07,15;UBERON:0000463,1.83e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.157421562627358,2.36018566109342,1.15148819429164,0.928896739896456,0,0,0,0.0774672005803016,0,0.587200878669695,1.10799081706375,0.200544447470142,0.651032612147555,1.11957737119962,0,0.515151135268373,1.74477886535478,0,0.485168122375632,1.16214518452842,1.23350366406548,1.54853185447552,1.43846196161075,0.768482119587302,1.89185783910868,1.03423704220986,2.5819387343353,1.35426486594342,0.752969358170419,0.818718450173537,1.57306439111559,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,0.797854630486527,0.852449501065388,1.45104619314292,0.56738522469114,1.24564449799115,1.00499466102697,1.0429658368404,2.38907729175628,0,1.10483290796269,1.26584954976354,4.43636101255078,4.889898899196,4.82214884669265,3.14520167210186,2.4028302854641,2.08943262706204,9.9754460309437,8.55341711956087,7.30656615058536,0,0,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0,0.276350017785848,0.579606171470105,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,0,0.5719949107801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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=S | |||
|UniProt=Q5STB1 | |||
|association_with_transcript=-21bp_to_ENST00000396107_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_11_at_LST1_5end | |||
|id=chr6:31554755..31554764,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.99e-63!112;CL:0000049!3.99e-63!112;CL:0000037!2.60e-59!172;CL:0000566!2.60e-59!172;CL:0000988!2.88e-54!182;CL:0002032!1.17e-53!165;CL:0000837!1.17e-53!165;CL:0002009!1.19e-51!65;CL:0000557!2.99e-49!71;CL:0002194!7.84e-49!63;CL:0000576!7.84e-49!63;CL:0000040!7.84e-49!63;CL:0000559!7.84e-49!63;CL:0000766!2.52e-48!76;CL:0002057!6.06e-47!42;CL:0000839!1.41e-45!70;CL:0000738!2.63e-45!140;CL:0000860!8.58e-43!45;CL:0002087!1.05e-38!119;CL:0002031!1.60e-37!124;CL:0000134!7.58e-14!358;CL:0002393!4.13e-13!9;CL:0002397!4.13e-13!9;CL:0002320!4.75e-13!365;CL:0000219!2.67e-10!390;CL:0000048!3.49e-07!430;CL:0000034!5.65e-07!444;CL:0000723!9.23e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.60e-45;39!CL:0000234;1.60e-45;39!CL:0000860;2.25e-35;33!CL:0002057;2.25e-35;33!CL:0000576;2.00e-34;48!CL:0000766;9.70e-28;69!CL:0000235;1.72e-21;6!CL:0000763;5.35e-20;100!CL:0000875;1.37e-12;3!CL:0002396;1.37e-12;3!CL:0002393;3.36e-10;6!CL:0002397;3.36e-10;6!CL:0000738;1.13e-09;136!CL:0000988;1.79e-09;177!CL:0001014;8.86e-09;2!CL:0001016;8.86e-09;2!CL:0002087;2.36e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.17e-77,48;CL:0000234,2.17e-77,48;CL:0002009,7.91e-70,61;CL:0000763,2.48e-68,108;CL:0000049,2.48e-68,108;CL:0002194,6.86e-64,59;CL:0000576,6.86e-64,59;CL:0000040,6.86e-64,59;CL:0000559,6.86e-64,59;CL:0000557,7.60e-63,67;CL:0000860,7.62e-59,42;CL:0002057,7.62e-59,42;CL:0000766,1.68e-57,72;CL:0000839,2.77e-56,66;CL:0000037,4.72e-46,168;CL:0002032,2.10e-44,161;CL:0000837,2.10e-44,161;CL:0000988,3.72e-43,177;CL:0000738,1.22e-35,136;CL:0002087,1.36e-34,115;CL:0002031,3.34e-33,120;CL:0000235,1.11e-21,6;CL:0002393,5.34e-20,9;CL:0002397,5.34e-20,9;CL:0000134,5.54e-16,354;CL:0002320,1.88e-15,361;CL:0000219,1.38e-13,386;CL:0000875,1.37e-12,3;CL:0002396,1.37e-12,3;CL:0000034,2.57e-11,441;CL:0000048,2.64e-11,427;CL:0000723,5.45e-11,433;CL:0001014,9.95e-09,2;CL:0001016,9.95e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-41;42!CL:0000049;1.01e-16;108 | |||
|ontology_enrichment_disease=DOID:8692!5.31e-14!31;DOID:1240!8.42e-11!39;DOID:2531!2.36e-08!51;DOID:0060083!2.36e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.26e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.85e-10,31;DOID:1240,2.46e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.01e-50!102;UBERON:0003061!3.01e-50!102;UBERON:0002193!1.59e-46!112;UBERON:0002371!2.81e-43!80;UBERON:0001474!7.05e-39!86;UBERON:0002405!4.89e-31!115;UBERON:0004765!3.23e-30!101;UBERON:0001434!3.23e-30!101;UBERON:0003081!2.35e-13!216;UBERON:0002384!5.66e-12!375;UBERON:0002204!2.51e-11!167;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15;UBERON:0007023!3.78e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-07;15!UBERON:0000179;1.30e-07;15!UBERON:0000463;1.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.39e-56,98;UBERON:0003061,4.39e-56,98;UBERON:0002371,2.06e-54,76;UBERON:0002193,5.33e-50,108;UBERON:0001474,8.31e-50,82;UBERON:0004765,1.30e-44,90;UBERON:0002405,6.83e-43,93;UBERON:0001434,2.82e-39,100;UBERON:0003081,5.80e-22,203;UBERON:0002204,5.88e-20,167;UBERON:0002384,9.91e-15,371;UBERON:0000926,1.23e-10,315;UBERON:0004120,1.23e-10,315;UBERON:0006603,1.23e-10,315;UBERON:0000178,1.83e-07,15;UBERON:0000179,1.83e-07,15;UBERON:0000463,1.83e-07,15 | |||
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|short_description=p11@LST1 | |||
}} |
Revision as of 20:13, 13 September 2013
Short description: | p11@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -21bp_to_ENST00000396107_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.39e-56 | 98 |
blood island | 4.39e-56 | 98 |
bone marrow | 2.06e-54 | 76 |
hemolymphoid system | 5.33e-50 | 108 |
bone element | 8.31e-50 | 82 |
skeletal element | 1.30e-44 | 90 |
immune system | 6.83e-43 | 93 |
skeletal system | 2.82e-39 | 100 |
lateral plate mesoderm | 5.80e-22 | 203 |
musculoskeletal system | 5.88e-20 | 167 |
connective tissue | 9.91e-15 | 371 |
mesoderm | 1.23e-10 | 315 |
mesoderm-derived structure | 1.23e-10 | 315 |
presumptive mesoderm | 1.23e-10 | 315 |
blood | 1.83e-07 | 15 |
haemolymphatic fluid | 1.83e-07 | 15 |
organism substance | 1.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.85e-10 | 31 |
leukemia | 2.46e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.