FFCP PHASE1:Hg19::chr14:24025194..24025231,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18987 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BU02 | |||
|association_with_transcript=0bp_to_ENST00000288014,ENST00000404535,ENST00000555446,NM_001126339,NM_024328,NR_023314,uc001wkg.3,uc001wkh.3,uc010akr.2_5end | |||
|description=CAGE_peak_3_at_THTPA_5end | |||
|id=chr14:24025194..24025231,+ | |||
|ontology_enrichment_celltype=CL:0002087!8.36e-10!119;CL:0002031!9.56e-10!124;CL:0000738!3.66e-08!140;CL:0000542!2.37e-07!53;CL:0000051!2.37e-07!53;CL:0000838!3.89e-07!52;CL:0000037!5.75e-07!172;CL:0000566!5.75e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.72e-08,115;CL:0002031,2.01e-08,120;CL:0000738,1.68e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-23!115;UBERON:0000073!2.05e-21!94;UBERON:0001016!2.05e-21!94;UBERON:0005743!1.06e-20!86;UBERON:0001049!2.21e-20!57;UBERON:0005068!2.21e-20!57;UBERON:0006241!2.21e-20!57;UBERON:0007135!2.21e-20!57;UBERON:0001017!5.62e-20!82;UBERON:0002616!1.08e-16!59;UBERON:0002780!1.17e-16!41;UBERON:0001890!1.17e-16!41;UBERON:0006240!1.17e-16!41;UBERON:0003080!1.19e-16!42;UBERON:0000955!1.38e-16!69;UBERON:0006238!1.38e-16!69;UBERON:0002020!1.88e-15!34;UBERON:0003528!1.88e-15!34;UBERON:0001893!1.94e-15!34;UBERON:0002791!5.86e-15!33;UBERON:0002346!2.65e-14!90;UBERON:0001869!3.21e-14!32;UBERON:0003075!4.85e-13!86;UBERON:0007284!4.85e-13!86;UBERON:0000956!6.28e-12!25;UBERON:0000203!6.28e-12!25;UBERON:0002619!1.45e-11!22;UBERON:0003056!2.27e-11!61;UBERON:0001950!1.94e-10!20;UBERON:0000924!6.41e-07!173;UBERON:0006601!6.41e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.00e-15;34!UBERON:0003528;1.56e-14;34!UBERON:0002020;1.56e-14;34!UBERON:0001869;1.79e-14;32!UBERON:0002791;1.81e-14;32!UBERON:0002780;6.24e-14;41!UBERON:0001890;6.24e-14;41!UBERON:0000956;1.02e-13;25!UBERON:0000203;1.02e-13;25!UBERON:0002619;4.52e-13;22!UBERON:0000073;1.03e-12;53!UBERON:0002616;1.03e-12;53!UBERON:0001950;9.35e-12;20!UBERON:0000955;2.05e-08;68!UBERON:0001017;2.78e-08;75!UBERON:0001016;3.29e-08;83!UBERON:0007023;6.64e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-23,114;UBERON:0001049,1.62e-22,56;UBERON:0005068,1.62e-22,56;UBERON:0006241,1.62e-22,56;UBERON:0007135,1.62e-22,56;UBERON:0001016,2.90e-22,89;UBERON:0001017,1.00e-21,81;UBERON:0000073,6.60e-21,53;UBERON:0002616,6.60e-21,53;UBERON:0002780,2.98e-18,41;UBERON:0001890,2.98e-18,41;UBERON:0003080,2.98e-18,41;UBERON:0006240,2.98e-18,41;UBERON:0000955,1.47e-17,68;UBERON:0006238,1.47e-17,68;UBERON:0003528,5.96e-17,34;UBERON:0002020,5.96e-17,34;UBERON:0001893,6.18e-17,34;UBERON:0002346,2.13e-16,86;UBERON:0002791,1.08e-15,32;UBERON:0001869,1.49e-15,32;UBERON:0003075,6.16e-15,82;UBERON:0007284,6.16e-15,82;UBERON:0000956,2.21e-13,25;UBERON:0000203,2.21e-13,25;UBERON:0002619,5.74e-13,22;UBERON:0003056,7.79e-13,61;UBERON:0001950,1.10e-11,20;UBERON:0010371,1.72e-09,104;UBERON:0004121,1.73e-07,171;UBERON:0000924,1.73e-07,171;UBERON:0006601,1.73e-07,171 | |||
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| |||
|short_description=p3@THTPA | |||
}} |
Revision as of 19:22, 11 January 2014
Short description: | p3@THTPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THTPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000288014, ENST00000404535, ENST00000555446, NM_001126339, NM_024328, NR_023314, uc001wkg.3, uc001wkh.3, uc010akr.2_5end |
EntrezGene: | THTPA |
HGNC: | 18987 |
UniProt: | Q9BU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.72e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.01e-08 | 120 |
leukocyte | 1.68e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.59e-23 | 114 |
neural tube | 1.62e-22 | 56 |
neural rod | 1.62e-22 | 56 |
future spinal cord | 1.62e-22 | 56 |
neural keel | 1.62e-22 | 56 |
nervous system | 2.90e-22 | 89 |
central nervous system | 1.00e-21 | 81 |
regional part of nervous system | 6.60e-21 | 53 |
regional part of brain | 6.60e-21 | 53 |
regional part of forebrain | 2.98e-18 | 41 |
forebrain | 2.98e-18 | 41 |
anterior neural tube | 2.98e-18 | 41 |
future forebrain | 2.98e-18 | 41 |
brain | 1.47e-17 | 68 |
future brain | 1.47e-17 | 68 |
brain grey matter | 5.96e-17 | 34 |
gray matter | 5.96e-17 | 34 |
telencephalon | 6.18e-17 | 34 |
neurectoderm | 2.13e-16 | 86 |
regional part of telencephalon | 1.08e-15 | 32 |
cerebral hemisphere | 1.49e-15 | 32 |
neural plate | 6.16e-15 | 82 |
presumptive neural plate | 6.16e-15 | 82 |
cerebral cortex | 2.21e-13 | 25 |
pallium | 2.21e-13 | 25 |
regional part of cerebral cortex | 5.74e-13 | 22 |
pre-chordal neural plate | 7.79e-13 | 61 |
neocortex | 1.10e-11 | 20 |
ecto-epithelium | 1.72e-09 | 104 |
ectoderm-derived structure | 1.73e-07 | 171 |
ectoderm | 1.73e-07 | 171 |
presumptive ectoderm | 1.73e-07 | 171 |