FFCP PHASE1:Hg19::chr1:114258267..114258270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8939 | |||
|TSSclassifier=not | |||
|UniProt=Q9BVX8 | |||
|association_with_transcript=-433bp_to_ENST00000474926,uc001edm.2_5end | |||
|description=CAGE_peak_5_at_PHTF1_5end | |||
|id=chr1:114258267..114258270,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.73e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,8.36e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.83e-16!82;UBERON:0005743!9.19e-16!86;UBERON:0001049!2.56e-15!57;UBERON:0005068!2.56e-15!57;UBERON:0006241!2.56e-15!57;UBERON:0007135!2.56e-15!57;UBERON:0000073!7.29e-15!94;UBERON:0001016!7.29e-15!94;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0002780!5.57e-14!41;UBERON:0001890!5.57e-14!41;UBERON:0006240!5.57e-14!41;UBERON:0002616!6.67e-14!59;UBERON:0002020!1.23e-13!34;UBERON:0003528!1.23e-13!34;UBERON:0001869!2.80e-13!32;UBERON:0003080!3.38e-13!42;UBERON:0001893!3.67e-13!34;UBERON:0002791!1.03e-12!33;UBERON:0002346!2.92e-11!90;UBERON:0000956!2.39e-10!25;UBERON:0000203!2.39e-10!25;UBERON:0003075!4.18e-10!86;UBERON:0007284!4.18e-10!86;UBERON:0002619!6.45e-10!22;UBERON:0001950!1.19e-08!20;UBERON:0003056!2.29e-08!61;UBERON:0007023!3.68e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.88e-10;22!UBERON:0002791;2.23e-08;32!UBERON:0000956;2.24e-08;25!UBERON:0000203;2.24e-08;25!UBERON:0001869;2.33e-08;32!UBERON:0003528;3.68e-07;34!UBERON:0002020;3.68e-07;34!UBERON:0001893;6.67e-07;34!UBERON:0001950;7.73e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.07e-10,22;UBERON:0001049,2.20e-09,56;UBERON:0005068,2.20e-09,56;UBERON:0006241,2.20e-09,56;UBERON:0007135,2.20e-09,56;UBERON:0002791,4.52e-09,32;UBERON:0001869,4.52e-09,32;UBERON:0000073,7.81e-09,53;UBERON:0002616,7.81e-09,53;UBERON:0000956,2.08e-08,25;UBERON:0000203,2.08e-08,25;UBERON:0003528,2.10e-08,34;UBERON:0002020,2.10e-08,34;UBERON:0001893,2.10e-08,34;UBERON:0002346,2.71e-08,86;UBERON:0001017,7.14e-08,81;UBERON:0002780,9.66e-08,41;UBERON:0001890,9.66e-08,41;UBERON:0003080,9.66e-08,41;UBERON:0006240,9.66e-08,41;UBERON:0001954,7.05e-07,2;UBERON:0003022,7.05e-07,2;UBERON:0002421,7.05e-07,2;UBERON:0002600,7.05e-07,2;UBERON:0003075,7.48e-07,82;UBERON:0007284,7.48e-07,82;UBERON:0001950,8.74e-07,20 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0.572471974262113,0.273748850145768,0.627713197974014,0.458480434487708,0.246301768349837,1.49550484495991,1.18009283054671,1.15148819429164,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,1.40381113229099,2.82114131930607,0.223915474239924,0,1.03030227053675,1.16318591023652,0.377875943688809,0.242584061187816,0,0,0,1.1507695692886,0,0.47296445977717,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0.855038231223746,0.39783335439818,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,1.70763890732835,0,0.382273228125229,5.28685314316103,2.24203425192614,0,0.983548850569165,0,0,0.167186495390678,0.32592226663359,0,0,0,0.589211814949674,0.443067789167242,0,0.896639238079726,0.260118695119756,1.31550323682941,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.351339142772504,0.458426764241994,0,0,0.649094787309367,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0.694281003215189,0,0,0,0,1.55050055501597,2.13459757612026,0.33472061276467,0,0,0,1.10298924103761,0,0.535798369704479,0,0.563057402416611,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0.149448680551801,0.469737994575059,0,0.702254033511242,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0.625592599359821,0,0,0,0,0.113432183160021,0.717558542755448,0,0,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,0,1.00973509697646,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0.448340575974109,0.197030760201927,1.2937654491571,1.15508732651774,0.254094624222463,1.30139853857622,1.54657762555539,0.837581326671744,1.27587750330633,2.99602809578873,5.9832291840805,0.414415513436035,0.12269149171914,0,0,0,0.356857977594324,0.946214490203608,0.234282829985426,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0,0,0.116210378459959,0.362578348774867,0.200506470303285,0.276242966807689,0,0.546273504020151,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.824125183365091,0.907604499126468,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.275673144969061,0.107420244868274,0.435050081742686,0.170453254832202,0.267096106940212,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0.949138274156178,0,0,0.855877976067841,0,0,0.179872457583315,0.823611089208164,0.706874414074119,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0.658589785919804,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0.507447609232169,2.29391162142713,1.13929437434833,0,0.411362273086194,0.648473311192717,2.16012574895246,0.79312517629427,0.534120355637366,0,0.245040215981032,0.557409525377156,0,0.497992903438899,0,0,0.383010740264733,0.635020748171649,0,0.842391534340376,0.912938716132769,0,0,0.846458889008016,0,0.201799707191048,0.851692475380653,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0.99921590399346,0,0,0.293016358543788,0.849523652246594,0.66866030566487,1.13654458722565,0,0,0,0,0.844016498463076,0.445234820091624,0,2.32237948940793,0.597743964753209,0.276283915531148,1.0077309914171,0.306806047506464,0.615424027305347,0,0.179736702294654,0.716084698702437,0,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| |||
|short_description=p5@PHTF1 | |||
}} |
Revision as of 20:14, 10 January 2014
Short description: | p5@PHTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PHTF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -433bp_to_ENST00000474926, uc001edm.2_5end |
EntrezGene: | PHTF1 |
HGNC: | 8939 |
UniProt: | Q9BVX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 8.36e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 9.07e-10 | 22 |
neural tube | 2.20e-09 | 56 |
neural rod | 2.20e-09 | 56 |
future spinal cord | 2.20e-09 | 56 |
neural keel | 2.20e-09 | 56 |
regional part of telencephalon | 4.52e-09 | 32 |
cerebral hemisphere | 4.52e-09 | 32 |
regional part of nervous system | 7.81e-09 | 53 |
regional part of brain | 7.81e-09 | 53 |
cerebral cortex | 2.08e-08 | 25 |
pallium | 2.08e-08 | 25 |
brain grey matter | 2.10e-08 | 34 |
gray matter | 2.10e-08 | 34 |
telencephalon | 2.10e-08 | 34 |
neurectoderm | 2.71e-08 | 86 |
central nervous system | 7.14e-08 | 81 |
regional part of forebrain | 9.66e-08 | 41 |
forebrain | 9.66e-08 | 41 |
anterior neural tube | 9.66e-08 | 41 |
future forebrain | 9.66e-08 | 41 |
Ammon's horn | 7.05e-07 | 2 |
lobe parts of cerebral cortex | 7.05e-07 | 2 |
hippocampal formation | 7.05e-07 | 2 |
limbic lobe | 7.05e-07 | 2 |
neural plate | 7.48e-07 | 82 |
presumptive neural plate | 7.48e-07 | 82 |
neocortex | 8.74e-07 | 20 |