FFCP PHASE1:Hg19::chr1:197886665..197886732,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56956 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14222 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQ69 | |||
|association_with_transcript=136bp_to_ENST00000367387_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_3_at_LHX9_5end | |||
|id=chr1:197886665..197886732,+ | |||
|ontology_enrichment_celltype=CL:0002620!5.17e-19!23;CL:0000057!8.94e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.83e-42;23!CL:0000511;1.58e-07;1!CL:0002625;1.58e-07;1!CL:0000216;1.58e-07;1!CL:0002616;2.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.44e-42,23;CL:0000057,8.96e-13,76;CL:0000511,1.63e-07,1;CL:0002625,1.63e-07,1;CL:0000216,1.63e-07,1;CL:0002616,2.37e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.18e-07;1!UBERON:0003852;5.18e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.02e-10!5;DOID:450!1.02e-10!5;DOID:66!1.02e-10!5;DOID:423!1.02e-10!5;DOID:0080000!1.02e-10!5;DOID:11722!1.02e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.62e-30;5!DOID:450;1.62e-30;5!DOID:66;1.62e-30;5!DOID:423;1.62e-30;5!DOID:0080000;1.62e-30;5!DOID:11722;1.62e-30;5!DOID:1115;1.83e-13;20!DOID:1192;1.12e-08;3!DOID:3093;5.11e-08;11!DOID:3371;9.90e-08;1!DOID:4549;9.90e-08;1!DOID:5861;9.90e-08;1!DOID:6496;9.90e-08;1!DOID:2513;2.51e-07;1!DOID:3369;3.11e-07;1!DOID:4235;5.18e-07;1!DOID:3571;5.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.23e-30,5;DOID:450,1.23e-30,5;DOID:66,1.23e-30,5;DOID:423,1.23e-30,5;DOID:0080000,1.23e-30,5;DOID:11722,1.23e-30,5;DOID:1115,1.66e-13,20;DOID:1192,9.78e-09,3;DOID:3093,4.74e-08,11;DOID:3371,9.91e-08,1;DOID:4549,9.91e-08,1;DOID:5861,9.91e-08,1;DOID:6496,9.91e-08,1;DOID:2513,2.52e-07,1;DOID:3369,2.84e-07,1;DOID:4235,5.19e-07,1;DOID:3571,6.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.36e-13!40;UBERON:0002199!4.52e-12!45;UBERON:0002416!4.52e-12!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.97e-21;41!UBERON:0002199;3.19e-16;46!UBERON:0002416;3.19e-16;46!UBERON:0003102;1.16e-11;50!UBERON:0001136;1.58e-07;1!UBERON:0001343;1.58e-07;1!UBERON:0004910;1.58e-07;1!UBERON:0004813;1.58e-07;1!UBERON:0007195;5.18e-07;1!UBERON:0005705;5.18e-07;1!UBERON:0008193;5.18e-07;1!UBERON:0010912;5.18e-07;1!UBERON:0002514;5.18e-07;1!UBERON:0003457;5.18e-07;1!UBERON:0008907;5.18e-07;1!UBERON:0008001;5.18e-07;1!UBERON:0007213;5.18e-07;1!UBERON:0009891;5.18e-07;1!UBERON:0007914;5.18e-07;1!UBERON:0007375;5.18e-07;1!UBERON:0003323;5.18e-07;1!UBERON:0010258;5.18e-07;1!UBERON:0005253;5.18e-07;1!UBERON:0007842;5.18e-07;1!UBERON:0002397;5.18e-07;1!UBERON:0003113;5.18e-07;1!UBERON:0003277;5.18e-07;1!UBERON:0001709;5.18e-07;1!UBERON:0002244;5.18e-07;1!UBERON:0005620;5.18e-07;1!UBERON:0010364;5.18e-07;1!UBERON:0004288;5.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.67e-26,41;UBERON:0002199,4.01e-23,46;UBERON:0002416,4.01e-23,46;UBERON:0003102,1.20e-10,99;UBERON:0001136,1.63e-07,1;UBERON:0001343,1.63e-07,1;UBERON:0004910,1.63e-07,1;UBERON:0005154,1.63e-07,1;UBERON:0005295,1.63e-07,1;UBERON:0004813,1.63e-07,1;UBERON:0005297,1.63e-07,1;UBERON:0005294,1.63e-07,1;UBERON:0010141,1.63e-07,1;UBERON:0005891,1.63e-07,1;UBERON:0007195,6.20e-07,1;UBERON:0005705,7.40e-07,1;UBERON:0008193,7.40e-07,1;UBERON:0010912,7.40e-07,1;UBERON:0002514,7.40e-07,1;UBERON:0003457,7.40e-07,1;UBERON:0008907,7.40e-07,1;UBERON:0008001,7.40e-07,1;UBERON:0007213,7.40e-07,1;UBERON:0009891,7.40e-07,1;UBERON:0007914,7.40e-07,1;UBERON:0009292,7.40e-07,1;UBERON:0003099,7.40e-07,1;UBERON:0007375,7.40e-07,1;UBERON:0003323,7.40e-07,1;UBERON:0010258,7.40e-07,1;UBERON:0007842,7.40e-07,1;UBERON:0009494,7.40e-07,1;UBERON:0010042,7.40e-07,1;UBERON:0010045,7.40e-07,1;UBERON:0010259,7.40e-07,1;UBERON:0010359,7.40e-07,1;UBERON:0009526,7.40e-07,1;UBERON:0002397,7.40e-07,1;UBERON:0003113,7.40e-07,1;UBERON:0003277,7.40e-07,1;UBERON:0001709,7.40e-07,1;UBERON:0004066,7.40e-07,1;UBERON:0002244,7.40e-07,1;UBERON:0005620,7.40e-07,1;UBERON:0004362,7.40e-07,1;UBERON:0010364,7.40e-07,1;UBERON:0010046,7.40e-07,1;UBERON:0005868,7.40e-07,1;UBERON:0007238,7.40e-07,1;UBERON:0004288,7.40e-07,1;UBERON:0004068,7.40e-07,1;UBERON:0010334,7.40e-07,1;UBERON:0003852,7.40e-07,1;UBERON:0010253,7.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,15.4275086692421,14.0947876620254,1.90738711043606,5.10154863343484,10.3052529238439,7.72921620136887,8.74749224758472,0.843881661206331,3.02054715999716,6.31084435610286,10.4936884452221,0,11.7153165530483,10.6797224121299,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.247528499761764,0,0,8.03419649220798,0.580024309752732,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.874813840149763,1.73624994933292,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,92.5806768993838,1.58186518546373,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,4.07712618220842,2.510468311496,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,1.77169466726548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,1.19271615249795,0,0,0,0,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,5.26281718988897,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,2.27006381426734,0.368211900503681,0,0,0,0.646948868380091,0,0.109209638192014,0,0.212574920101683,0,1.67593475391973,0.318004350653419,0,0,1.05802783107205,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,2.18109952212846,0,0,0,0,0,0,0.781078098613847,0,0,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0,0,1.35941691750254,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,1.89446745545599,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p3@LHX9 | |||
}} |
Revision as of 23:06, 10 January 2014
Short description: | p3@LHX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LHX9_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 136bp_to_ENST00000367387_5end |
EntrezGene: | LHX9 |
HGNC: | 14222 |
UniProt: | Q9NQ69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.44e-42 | 23 |
fibroblast | 8.96e-13 | 76 |
androgen binding protein secreting cell | 1.63e-07 | 1 |
seminiferous tubule epithelial cell | 1.63e-07 | 1 |
Sertoli cell | 1.63e-07 | 1 |
perirenal adipocyte cell | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.23e-30 | 5 |
myotonic disease | 1.23e-30 | 5 |
muscle tissue disease | 1.23e-30 | 5 |
myopathy | 1.23e-30 | 5 |
muscular disease | 1.23e-30 | 5 |
myotonic dystrophy | 1.23e-30 | 5 |
sarcoma | 1.66e-13 | 20 |
peripheral nervous system neoplasm | 9.78e-09 | 3 |
nervous system cancer | 4.74e-08 | 11 |
chondrosarcoma | 9.91e-08 | 1 |
extraosseous chondrosarcoma | 9.91e-08 | 1 |
myxoid chondrosarcoma | 9.91e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-08 | 1 |
basal cell carcinoma | 2.52e-07 | 1 |
peripheral primitive neuroectodermal tumor | 2.84e-07 | 1 |
spindle cell sarcoma | 5.19e-07 | 1 |
liver cancer | 6.97e-07 | 1 |