FFCP PHASE1:Hg19::chr1:45672221..45672260,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29299 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P217 | |||
|association_with_transcript=0bp_to_ENST00000359600,NM_020883,uc001cnd.2_5end | |||
|description=CAGE_peak_2_at_ZSWIM5_5end | |||
|id=chr1:45672221..45672260,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.88e-09;29!UBERON:0001041;3.82e-08;30 | |||
|ontology_enrichment_disease=DOID:305!5.82e-15!106;DOID:0050687!3.26e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-11,106;DOID:0050687,2.88e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.60e-24!115;UBERON:0001017!2.19e-17!82;UBERON:0005743!5.38e-17!86;UBERON:0000073!1.65e-15!94;UBERON:0001016!1.65e-15!94;UBERON:0001049!4.57e-15!57;UBERON:0005068!4.57e-15!57;UBERON:0006241!4.57e-15!57;UBERON:0007135!4.57e-15!57;UBERON:0003075!2.61e-14!86;UBERON:0007284!2.61e-14!86;UBERON:0002346!7.20e-14!90;UBERON:0000955!1.87e-13!69;UBERON:0006238!1.87e-13!69;UBERON:0002780!2.69e-13!41;UBERON:0001890!2.69e-13!41;UBERON:0006240!2.69e-13!41;UBERON:0002616!4.67e-13!59;UBERON:0003080!1.68e-12!42;UBERON:0000477!3.55e-11!286;UBERON:0004111!1.61e-10!241;UBERON:0003056!2.01e-10!61;UBERON:0001893!2.37e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0001869!4.04e-10!32;UBERON:0002791!5.62e-10!33;UBERON:0000025!1.20e-09!194;UBERON:0000153!5.42e-09!129;UBERON:0007811!5.42e-09!129;UBERON:0000033!8.97e-09!123;UBERON:0000481!7.58e-08!347;UBERON:0004121!9.48e-08!169;UBERON:0000924!1.14e-07!173;UBERON:0006601!1.14e-07!173;UBERON:0002619!1.58e-07!22;UBERON:0000956!2.74e-07!25;UBERON:0000203!2.74e-07!25;UBERON:0001950!3.49e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.09e-10;41!UBERON:0001890;2.09e-10;41!UBERON:0000073;3.67e-10;53!UBERON:0002616;3.67e-10;53!UBERON:0001869;1.16e-09;32!UBERON:0002791;5.14e-09;32!UBERON:0001893;5.32e-09;34!UBERON:0003528;6.37e-09;34!UBERON:0002020;6.37e-09;34!UBERON:0001950;4.42e-08;20!UBERON:0007023;6.09e-08;114!UBERON:0002619;8.98e-08;22!UBERON:0000955;1.34e-07;68!UBERON:0000922;4.14e-07;49!UBERON:0000956;5.24e-07;25!UBERON:0000203;5.24e-07;25!UBERON:0001016;9.02e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.46e-25,114;UBERON:0001017,3.60e-18,81;UBERON:0011216,5.30e-18,223;UBERON:0000073,6.63e-17,53;UBERON:0002616,6.63e-17,53;UBERON:0001016,2.23e-16,89;UBERON:0001049,4.82e-16,56;UBERON:0005068,4.82e-16,56;UBERON:0006241,4.82e-16,56;UBERON:0007135,4.82e-16,56;UBERON:0002780,1.12e-14,41;UBERON:0001890,1.12e-14,41;UBERON:0003080,1.12e-14,41;UBERON:0006240,1.12e-14,41;UBERON:0000955,3.10e-14,68;UBERON:0006238,3.10e-14,68;UBERON:0003075,9.60e-13,82;UBERON:0007284,9.60e-13,82;UBERON:0002346,2.76e-12,86;UBERON:0001869,4.32e-11,32;UBERON:0001893,8.77e-11,34;UBERON:0003056,9.86e-11,61;UBERON:0003528,1.53e-10,34;UBERON:0002020,1.53e-10,34;UBERON:0002791,5.20e-10,32;UBERON:0010371,1.58e-08,104;UBERON:0001950,1.75e-08,20;UBERON:0002619,2.69e-08,22;UBERON:0000025,1.00e-07,192;UBERON:0000956,2.24e-07,25;UBERON:0000203,2.24e-07,25;UBERON:0004121,3.88e-07,171;UBERON:0000924,3.88e-07,171;UBERON:0006601,3.88e-07,171;UBERON:0004111,9.14e-07,240 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0.61560529038394,0.816002764977012,1.25381888591235,1.14494394852423,0.821246550437305,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,1.20118796110804,0.574752439954483,0,0,0,0,0.764546456250458,1.32171328579026,1.12101712596307,0.263384084775077,1.7703879310245,1.96505381374582,2.05601498999509,0,0,0.473447805734733,1.94826728407911,0.111410456885174,0,0.664601683750863,0,0,0.390178042679635,0.822189523018381,0.552700035571697,0.869409257205157,2.22429844743091,1.60524496853828,2.09071047609954,0.226618685395132,1.14966148080576,0,0.759059076058509,2.22995790026868,2.60433381542567,1.90090408889675,1.05402583354441,2.55973222308837,2.49861453104692,1.4206635122641,0,2.62088766192152,2.67440195783507,4.19990771260117,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0.283604451492204,0.443458794925128,0.351339142772504,1.83370705696798,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,1.38856200643038,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,0,0.446498641420399,0.673588117878509,0.788280363383256,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0.926864265692532,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0.67355336034844,0.163461903113459,0.605429710579726,0,0.70296429550139,0.936480230490962,0,0.597794722207204,0,0,0.280901613404497,1.02077085627447,0.368502951935304,2.37649296704261,0,0,1.82032272387605,0,0.168336113954066,0.125118519871964,1.6623846929051,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,4.24095258628753,4.53156377191122,2.798848485415,3.02785021050754,2.91981887260664,0,0,0,0.464367928031979,0.721879481669586,1.53798840051797,1.01150814046861,1.92808823906786,1.21323370005633,0.653638332277218,1.66089433377768,1.21348177344148,1.17732879075208,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,0,2.36315962672562,0.441463099414651,0.860919069801795,0.686271241194102,0.109750285408626,0,0,0,0.325808305310325,2.07986957055916,0,1.15930404975077,0.352226082707465,1.15493158208859,1.85194205030644,1.90254152234598,6.3216351836742,6.86788929675898,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,1.18218456121156,1.50939302401662,1.92514554419623,1.27047312111232,1.30139853857622,2.31986643833309,4.85797169469611,1.27587750330633,0,0,0,0.12269149171914,0,0.542530047399471,1.24782516918484,0.356857977594324,0.473107245101804,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0.979005787313703,0.686286847621712,1.24060815673732,1.72571360654893,1.60091336705167,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.410635780069046,1.03850885836724,0.232420756919918,0.483437798366489,0.40101294060657,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0,1.54227252690289,0,1.00337954770971,0.254876273045038,0,0,0,0,0.512900250232778,0,0.325378394664303,1.23649213977267,1.28197250745681,1.98022799809411,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.510450849978337,0.10115778085555,0.929691098594572,0.94443704049192,1.3940745403212,0.924100740528266,0.532306030317022,2.60979897622522,0.74129687641568,0.572499546967965,0.744316738719335,0.316379424718726,0,0,0,0.318203247925937,2.35484592059769,0,0,0,0.202182481573316,0,1.26377536871694,0,1.21856744815642,0,0.545999645631943,0.282810863907425,2.26016233240486,2.2054613741845,2.65375590096488,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0.75894634753143,1.74967360122491,0,0,0,0.753150406214233,0,1.68471475667626,0.443430153536676,0,1.01489521846434,0,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,0,2.37937552888281,2.67060177818683,0,0.245040215981032,0,1.15415370381156,0.782560276832555,1.75368900001705,0,0,0.423347165447766,0,0,0,0.626719583092093,2.50634477090067,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0,0,7.85990269714523,0.293016358543788,4.36897878298248,0,3.12549761487054,0,0,0,5.96488588659779,1.26602474769461,0.77916093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| |||
|short_description=p2@ZSWIM5 | |||
}} |
Revision as of 18:19, 10 January 2014
Short description: | p2@ZSWIM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZSWIM5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359600, NM_020883, uc001cnd.2_5end |
EntrezGene: | ZSWIM5 |
HGNC: | 29299 |
UniProt: | Q9P217 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.46e-25 | 114 |
central nervous system | 3.60e-18 | 81 |
organ system subdivision | 5.30e-18 | 223 |
regional part of nervous system | 6.63e-17 | 53 |
regional part of brain | 6.63e-17 | 53 |
nervous system | 2.23e-16 | 89 |
neural tube | 4.82e-16 | 56 |
neural rod | 4.82e-16 | 56 |
future spinal cord | 4.82e-16 | 56 |
neural keel | 4.82e-16 | 56 |
regional part of forebrain | 1.12e-14 | 41 |
forebrain | 1.12e-14 | 41 |
anterior neural tube | 1.12e-14 | 41 |
future forebrain | 1.12e-14 | 41 |
brain | 3.10e-14 | 68 |
future brain | 3.10e-14 | 68 |
neural plate | 9.60e-13 | 82 |
presumptive neural plate | 9.60e-13 | 82 |
neurectoderm | 2.76e-12 | 86 |
cerebral hemisphere | 4.32e-11 | 32 |
telencephalon | 8.77e-11 | 34 |
pre-chordal neural plate | 9.86e-11 | 61 |
brain grey matter | 1.53e-10 | 34 |
gray matter | 1.53e-10 | 34 |
regional part of telencephalon | 5.20e-10 | 32 |
ecto-epithelium | 1.58e-08 | 104 |
neocortex | 1.75e-08 | 20 |
regional part of cerebral cortex | 2.69e-08 | 22 |
tube | 1.00e-07 | 192 |
cerebral cortex | 2.24e-07 | 25 |
pallium | 2.24e-07 | 25 |
ectoderm-derived structure | 3.88e-07 | 171 |
ectoderm | 3.88e-07 | 171 |
presumptive ectoderm | 3.88e-07 | 171 |
anatomical conduit | 9.14e-07 | 240 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-11 | 106 |
cell type cancer | 2.88e-09 | 143 |