FFCP PHASE1:Hg19::chr20:57485048..57485073,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000475610_5end | |||
|description=CAGE_peak_28_at_GNAS_5end | |||
|id=chr20:57485048..57485073,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,8.09e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.24e-10!57;UBERON:0005068!5.24e-10!57;UBERON:0006241!5.24e-10!57;UBERON:0007135!5.24e-10!57;UBERON:0002616!1.23e-08!59;UBERON:0007023!1.42e-08!115;UBERON:0000956!2.75e-08!25;UBERON:0000203!2.75e-08!25;UBERON:0002619!3.13e-08!22;UBERON:0003075!6.17e-08!86;UBERON:0007284!6.17e-08!86;UBERON:0000481!7.73e-08!347;UBERON:0000477!1.05e-07!286;UBERON:0001017!1.08e-07!82;UBERON:0002780!1.28e-07!41;UBERON:0001890!1.28e-07!41;UBERON:0006240!1.28e-07!41;UBERON:0002346!1.31e-07!90;UBERON:0001950!2.51e-07!20;UBERON:0000955!2.90e-07!69;UBERON:0006238!2.90e-07!69;UBERON:0003080!4.70e-07!42;UBERON:0005743!5.77e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.32e-12;22!UBERON:0001950;1.87e-11;20!UBERON:0000956;1.83e-10;25!UBERON:0000203;1.83e-10;25!UBERON:0001872;1.28e-07;5!UBERON:0003528;2.04e-07;34!UBERON:0002020;2.04e-07;34!UBERON:0002791;8.87e-07;32!UBERON:0001869;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.26e-12,22;UBERON:0001950,1.55e-11,20;UBERON:0000956,1.31e-10,25;UBERON:0000203,1.31e-10,25;UBERON:0002780,2.63e-09,41;UBERON:0001890,2.63e-09,41;UBERON:0003080,2.63e-09,41;UBERON:0006240,2.63e-09,41;UBERON:0001049,4.44e-09,56;UBERON:0005068,4.44e-09,56;UBERON:0006241,4.44e-09,56;UBERON:0007135,4.44e-09,56;UBERON:0003528,1.38e-08,34;UBERON:0002020,1.38e-08,34;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0001017,4.37e-08,81;UBERON:0002791,9.11e-08,32;UBERON:0001869,9.11e-08,32;UBERON:0001872,9.44e-08,5;UBERON:0001016,1.37e-07,89;UBERON:0000955,1.96e-07,68;UBERON:0006238,1.96e-07,68;UBERON:0003075,3.11e-07,82;UBERON:0007284,3.11e-07,82;UBERON:0007023,3.37e-07,114;UBERON:0001893,3.60e-07,34;UBERON:0003056,6.89e-07,61 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.12763523276777,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.791300934685361,0.37129905888014,0.662794751455832,0.672325146451775,0.602694528023977,0,0.975865597581014,0.738726348460727,0.612002073732759,0.313454721478088,0.85870796139317,0.547497700291537,0.125542639594803,0.0764134057479513,0.246301768349837,0.236132343941038,0,0.383829398097213,0.309632246632152,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0.77272670290256,0.726991193897824,0,0,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0.600707571366025,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0.403213486449465,1.06976078313403,0.144824403882799,0,0,0.383587685530591,0,0,0.869079113764942,0.795285947051099,0,0.378139268656271,0,0.351339142772504,0.196468613246569,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.531831842075461,0.715471872916026,0.571994910780128,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.516833518338658,1.06729878806013,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,0.302714855289863,1.15235184896,0.468642863667593,0.624320153660641,0,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,0,1.43723628363248,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.45071417671979,0.340296549480063,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.545492241181669,0,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0.946454400318751,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.71181185733329,0.674156540800822,1.17732879075208,0.769494313892781,0,1.40241773803446,1.2347220339942,2.94017422771084,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0.514703430895577,0.219500570817251,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0.463721619900307,0.352226082707465,0.433099343283221,1.38895653772983,1.14152491340759,0,1.71697232418975,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0.528290604079356,0,0.288239906833923,0,0.190493682876507,0.763976851116555,1.17217447210047,0,0.308482478109971,0,1.14330573052231,0.560655421726804,0.43596006883328,0.22001485746285,0.258543431515556,0,0.845302752556,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0.428933980974443,1.62786481617433,1.64648067356154,0,0,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.61642896765115,0.537182889719687,0.448340575974109,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.167516265334349,1.27587750330633,1.49801404789436,2.99161459204025,0,0.24538298343828,2.50085260529839,0.271265023699736,1.66376689224646,1.24900292158013,0.946214490203608,0.35142424497814,0,0,0,0,0.737476674166813,0.347534457872331,0.195801157462741,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0.907170879989041,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.232420756919918,0.604297247958111,0.601519410909855,0.368323955743585,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.863663664408557,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.54941678891006,0.41254749960294,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0.290033387828457,0.255679882248303,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| |||
|short_description=p28@GNAS | |||
}} |
Revision as of 12:29, 21 January 2014
Short description: | p28@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_GNAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475610_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 8.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.26e-12 | 22 |
neocortex | 1.55e-11 | 20 |
cerebral cortex | 1.31e-10 | 25 |
pallium | 1.31e-10 | 25 |
regional part of forebrain | 2.63e-09 | 41 |
forebrain | 2.63e-09 | 41 |
anterior neural tube | 2.63e-09 | 41 |
future forebrain | 2.63e-09 | 41 |
neural tube | 4.44e-09 | 56 |
neural rod | 4.44e-09 | 56 |
future spinal cord | 4.44e-09 | 56 |
neural keel | 4.44e-09 | 56 |
brain grey matter | 1.38e-08 | 34 |
gray matter | 1.38e-08 | 34 |
regional part of nervous system | 1.42e-08 | 53 |
regional part of brain | 1.42e-08 | 53 |
central nervous system | 4.37e-08 | 81 |
regional part of telencephalon | 9.11e-08 | 32 |
cerebral hemisphere | 9.11e-08 | 32 |
parietal lobe | 9.44e-08 | 5 |
nervous system | 1.37e-07 | 89 |
brain | 1.96e-07 | 68 |
future brain | 1.96e-07 | 68 |
neural plate | 3.11e-07 | 82 |
presumptive neural plate | 3.11e-07 | 82 |
adult organism | 3.37e-07 | 114 |
telencephalon | 3.60e-07 | 34 |
pre-chordal neural plate | 6.89e-07 | 61 |