FFCP PHASE1:Hg19::chr2:60780871..60780882,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13221 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-169bp_to_ENST00000359629_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_16_at_BCL11A_5end | |||
|id=chr2:60780871..60780882,- | |||
|ontology_enrichment_celltype=CL:0000540!8.19e-13!6;CL:0000031!8.19e-13!6;CL:0000404!8.19e-13!6;CL:0000047!2.28e-09!8;CL:0000945!4.79e-08!24;CL:0000826!4.79e-08!24;CL:0000784!2.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.03e-22;6!CL:0000404;5.03e-22;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.03e-22,6;CL:0000031,5.03e-22,6;CL:0000404,5.03e-22,6;CL:0000047,1.08e-16,8 | |||
|ontology_enrichment_development_v019=CL:0000031;5.03e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.32e-25!22;UBERON:0001950!6.71e-25!20;UBERON:0001017!7.71e-23!82;UBERON:0001869!2.04e-22!32;UBERON:0000956!1.15e-21!25;UBERON:0000203!1.15e-21!25;UBERON:0005743!2.66e-21!86;UBERON:0000073!6.75e-21!94;UBERON:0001016!6.75e-21!94;UBERON:0001893!9.04e-21!34;UBERON:0002020!1.02e-20!34;UBERON:0003528!1.02e-20!34;UBERON:0002780!1.06e-19!41;UBERON:0001890!1.06e-19!41;UBERON:0006240!1.06e-19!41;UBERON:0002791!2.23e-19!33;UBERON:0003080!4.41e-19!42;UBERON:0001049!8.48e-18!57;UBERON:0005068!8.48e-18!57;UBERON:0006241!8.48e-18!57;UBERON:0007135!8.48e-18!57;UBERON:0000955!4.03e-17!69;UBERON:0006238!4.03e-17!69;UBERON:0002616!6.06e-17!59;UBERON:0007023!1.20e-11!115;UBERON:0003075!2.79e-11!86;UBERON:0007284!2.79e-11!86;UBERON:0003056!3.16e-11!61;UBERON:0002021!5.14e-11!5;UBERON:0002346!1.90e-10!90;UBERON:0004121!8.00e-10!169;UBERON:0000924!2.34e-09!173;UBERON:0006601!2.34e-09!173;UBERON:0001871!4.54e-09!7;UBERON:0000033!2.73e-08!123;UBERON:0000153!3.47e-08!129;UBERON:0007811!3.47e-08!129;UBERON:0000200!3.94e-08!6;UBERON:0001872!8.47e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.83e-32;20!UBERON:0002619;1.30e-29;22!UBERON:0000956;3.71e-26;25!UBERON:0000203;3.71e-26;25!UBERON:0002021;5.09e-26;5!UBERON:0002791;2.35e-20;32!UBERON:0001869;2.94e-20;32!UBERON:0001871;9.36e-19;6!UBERON:0001893;5.11e-17;34!UBERON:0003528;1.16e-15;34!UBERON:0002020;1.16e-15;34!UBERON:0002780;6.56e-13;41!UBERON:0001890;6.56e-13;41!UBERON:0000922;2.42e-09;49!UBERON:0002771;2.48e-08;2!UBERON:0000955;8.74e-08;68!UBERON:0001017;5.96e-07;75!UBERON:0000073;8.33e-07;53!UBERON:0002616;8.33e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.97e-32,20;UBERON:0002619,1.39e-29,22;UBERON:0000956,3.93e-26,25;UBERON:0000203,3.93e-26,25;UBERON:0002021,3.94e-26,5;UBERON:0002791,1.64e-20,32;UBERON:0001869,1.64e-20,32;UBERON:0001017,1.49e-19,81;UBERON:0003528,2.57e-19,34;UBERON:0002020,2.57e-19,34;UBERON:0001893,2.57e-19,34;UBERON:0001871,1.23e-18,6;UBERON:0001016,1.56e-17,89;UBERON:0002780,5.02e-16,41;UBERON:0001890,5.02e-16,41;UBERON:0003080,5.02e-16,41;UBERON:0006240,5.02e-16,41;UBERON:0000073,2.32e-12,53;UBERON:0002616,2.32e-12,53;UBERON:0000955,2.85e-12,68;UBERON:0006238,2.85e-12,68;UBERON:0001049,1.10e-11,56;UBERON:0005068,1.10e-11,56;UBERON:0006241,1.10e-11,56;UBERON:0007135,1.10e-11,56;UBERON:0003056,1.06e-10,61;UBERON:0004121,1.04e-08,171;UBERON:0000924,1.04e-08,171;UBERON:0006601,1.04e-08,171;UBERON:0002771,3.08e-08,2;UBERON:0003075,7.38e-08,82;UBERON:0007284,7.38e-08,82;UBERON:0011216,9.47e-08,223;UBERON:0002346,1.80e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0.954053754535364,1.70763890732835,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.335032530668698,13.3967137847164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0.561594356226918,0.684704037099577,0.313359791546046,0,0.846458889008016,0,0.201799707191048,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,3.0607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.550157746388935,1.24632101408756,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,0,1.09823638411767,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.639471856518258,0,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0.192687675289379,1.41696576325585,0.319267718114302,1.43581454968528,6.04972070932123,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,9.84554656232795,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.197318320688547,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.439762066981716,0,0,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.339957450954573,10.0360658778287,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p16@BCL11A | |||
}} |
Revision as of 03:22, 21 January 2014
Short description: | p16@BCL11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_BCL11A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -169bp_to_ENST00000359629_5end |
EntrezGene: | BCL11A |
HGNC: | 13221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.03e-22 | 6 |
neuroblast | 5.03e-22 | 6 |
electrically signaling cell | 5.03e-22 | 6 |
neuronal stem cell | 1.08e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.97e-32 | 20 |
regional part of cerebral cortex | 1.39e-29 | 22 |
cerebral cortex | 3.93e-26 | 25 |
pallium | 3.93e-26 | 25 |
occipital lobe | 3.94e-26 | 5 |
regional part of telencephalon | 1.64e-20 | 32 |
cerebral hemisphere | 1.64e-20 | 32 |
central nervous system | 1.49e-19 | 81 |
brain grey matter | 2.57e-19 | 34 |
gray matter | 2.57e-19 | 34 |
telencephalon | 2.57e-19 | 34 |
temporal lobe | 1.23e-18 | 6 |
nervous system | 1.56e-17 | 89 |
regional part of forebrain | 5.02e-16 | 41 |
forebrain | 5.02e-16 | 41 |
anterior neural tube | 5.02e-16 | 41 |
future forebrain | 5.02e-16 | 41 |
regional part of nervous system | 2.32e-12 | 53 |
regional part of brain | 2.32e-12 | 53 |
brain | 2.85e-12 | 68 |
future brain | 2.85e-12 | 68 |
neural tube | 1.10e-11 | 56 |
neural rod | 1.10e-11 | 56 |
future spinal cord | 1.10e-11 | 56 |
neural keel | 1.10e-11 | 56 |
pre-chordal neural plate | 1.06e-10 | 61 |
ectoderm-derived structure | 1.04e-08 | 171 |
ectoderm | 1.04e-08 | 171 |
presumptive ectoderm | 1.04e-08 | 171 |
middle temporal gyrus | 3.08e-08 | 2 |
neural plate | 7.38e-08 | 82 |
presumptive neural plate | 7.38e-08 | 82 |
organ system subdivision | 9.47e-08 | 223 |
neurectoderm | 1.80e-07 | 86 |