FFCP PHASE1:Mm9::chr11:48596086..48596090,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=432|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:48596086..48596090,+|id=chr11:48596086..48596090,+|ontology_enrichment_celltype=CL:0000548!2.99e-35!115;CL:0000004!2.99e-35!115;CL:0000255!2.99e-35!115;CL:0002371!2.93e-33!118;CL:0000144!1.01e-32!121;CL:0000012!1.01e-32!121;CL:0000034!2.29e-30!97;CL:0000723!7.00e-30!91;CL:0000048!7.00e-30!91;CL:0002321!1.51e-23!70;CL:0000220!1.51e-23!70;CL:0000055!1.92e-23!50;CL:0002319!4.61e-22!43;CL:0000221!4.31e-21!44;CL:0000133!4.31e-21!44;CL:0000393!5.45e-19!39;CL:0000211!5.45e-19!39;CL:0000540!4.17e-18!33;CL:0000047!4.17e-18!33;CL:0000031!4.17e-18!33;CL:0000404!4.17e-18!33;CL:0000219!4.72e-16!54;CL:0000117!3.14e-14!23;CL:0000337!3.14e-14!23;CL:0002320!3.88e-13!46;CL:0000134!3.88e-13!46;CL:0002031!4.05e-11!25;CL:0000063!3.58e-10!66;CL:0000839!3.94e-08!13;CL:0000988!8.11e-08!32;CL:0002032!8.11e-08!32;CL:0000037!8.11e-08!32;CL:0000566!8.11e-08!32;CL:0000837!8.11e-08!32|ontology_enrichment_celltype_v019_2=CL:0000723,5.79e-39,91;CL:0000048,5.79e-39,91;CL:0000034,1.19e-37,97;CL:0002321,7.38e-31,70;CL:0002319,1.47e-29,43;CL:0000221,1.45e-28,44;CL:0000133,1.45e-28,44;CL:0000540,1.20e-25,33;CL:0000047,1.20e-25,33;CL:0000031,1.20e-25,33;CL:0000404,1.20e-25,33;CL:0000393,1.44e-25,39;CL:0000211,1.44e-25,39;CL:0000117,1.05e-19,23;CL:0000337,1.05e-19,23;CL:0000219,1.79e-18,54;CL:0002320,1.13e-15,46;CL:0000134,1.13e-15,46;CL:0002031,3.33e-12,25;CL:0000839,8.54e-10,13;CL:0000988,5.60e-09,32;CL:0002032,5.60e-09,32;CL:0000037,5.60e-09,32;CL:0000837,5.60e-09,32;CL:0000763,2.38e-08,16;CL:0000107,4.64e-08,9;CL:0002453,8.34e-07,8;CL:0000050,9.97e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.02e-21!75;UBERON:0001016!1.02e-21!75;UBERON:0001017!1.17e-21!73;UBERON:0005743!1.17e-21!73;UBERON:0002020!2.28e-14!34;UBERON:0002384!3.88e-13!46;UBERON:0002791!6.25e-12!29;UBERON:0003528!6.25e-12!29;UBERON:0001893!6.25e-12!29;UBERON:0004121!8.18e-12!102;UBERON:0000924!8.18e-12!102;UBERON:0006601!8.18e-12!102;UBERON:0000955!8.35e-12!50;UBERON:0006238!8.35e-12!50;UBERON:0001049!1.08e-11!52;UBERON:0005068!1.08e-11!52;UBERON:0006241!1.08e-11!52;UBERON:0007135!1.08e-11!52;UBERON:0002616!1.38e-11!49;UBERON:0002780!1.30e-10!39;UBERON:0001890!1.30e-10!39;UBERON:0006240!1.30e-10!39;UBERON:0003080!1.44e-10!40;UBERON:0000956!4.64e-10!21;UBERON:0001869!4.64e-10!21;UBERON:0000203!4.64e-10!21;UBERON:0002619!1.61e-09!17;UBERON:0002346!6.58e-09!71;UBERON:0003075!6.58e-09!71;UBERON:0007284!6.58e-09!71;UBERON:0003056!1.63e-08!49;UBERON:0000033!2.93e-08!63;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10;UBERON:0007811!2.26e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.57e-24,73;UBERON:0001016,2.00e-23,75;UBERON:0002020,2.17e-20,34;UBERON:0003528,7.03e-17,29;UBERON:0002791,7.03e-17,29;UBERON:0001893,7.03e-17,29;UBERON:0004121,9.62e-16,95;UBERON:0000924,9.62e-16,95;UBERON:0006601,9.62e-16,95;UBERON:0002384,1.13e-15,46;UBERON:0000073,1.54e-14,54;UBERON:0000956,1.50e-13,21;UBERON:0001869,1.50e-13,21;UBERON:0000203,1.50e-13,21;UBERON:0002619,2.06e-12,17;UBERON:0001049,5.65e-12,52;UBERON:0005068,5.65e-12,52;UBERON:0006241,5.65e-12,52;UBERON:0007135,5.65e-12,52;UBERON:0002346,4.34e-11,64;UBERON:0003075,4.34e-11,64;UBERON:0007284,4.34e-11,64;UBERON:0002021,5.01e-11,10;UBERON:0000411,5.01e-11,10;UBERON:0001950,5.01e-11,10;UBERON:0002780,1.89e-10,39;UBERON:0001890,1.89e-10,39;UBERON:0006240,1.89e-10,39;UBERON:0003080,5.39e-10,40;UBERON:0002616,1.44e-09,46;UBERON:0000955,3.42e-09,47;UBERON:0006238,3.42e-09,47;UBERON:0010371,1.98e-08,73;UBERON:0002410,4.64e-08,9;UBERON:0002371,4.86e-08,16;UBERON:0011216,1.20e-07,194;UBERON:0003056,2.14e-07,49|phase1_expression=0,0,0,1.20985684522732,7.01254021924886,0,0.934450562382103,5.03580961422147,2.956563165185,4.68129052643987,1.71217968225505,1.19658238493005,5.13602189793617,2.01066925563694,20.9859149943868,0.404950534779652,12.5921138063066,3.47008381894061,4.52477630898938,17.8243653755173,0,0.595745707205312,1.82839852397255,0.319984845586813,0.91763712426868,0,0,0,1.71021077510736,0,0,130.816318732684,54.7407660950267,427.900538741685,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0,33.6428278069657,8.50298109883741,9.22681967484782,16.5265414213141,8.9591309840232,8.62515386189829,0.335565212115473,1.45072428402269,3.6970317905671,20.3234954468398,30.659078073447,47.9575045818021,15.578367486189,101.56626802023,19.0149421051854,8.13226876965917,4.4464739805557,16.1981949110652,137.452424396809,88.8100143682625,24.8668091730276,9.22123932771731,2.7996195323289,37.53165085621,15.3537221786509,15.996455126613,13.2521124570968,18.4961106814581,21.3735400370667,25.7381260250806,91.3961812294926,15.1947932321373,17.5111447912118,27.5642341356105,24.793151416253,13.022834263919,30.4309468911505,19.6966913511088,33.768412758675,28.2843442054721,5.26775218956681,8.94717339961443,0.227178579999552,0.151143120213571,1.73918693221007,2.58127163094416,13.599426674155,44.7953649059388,30.5394916200404,26.4335863387428,0.140444420131752,0,2.85764605063156,0.70667914902068,0,2.56652954828636,2.54805239706646,0,4.5463118612355,3.29367825117628,5.56076889516262,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.260240885925407,1.14951052216736,0,0,0.0680364991513279,0,0,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0,1.70542270593436,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0,0.144649058581512,28.6503439484617,17.9488875660174,0,0,0,0,0,0,14.8288863125641,10.9322848403059,33.3906266485838,17.2057534525837,18.9378872970035,19.5322806244294,13.3587531552715,11.3979784585412,22.9266911208984,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0,0,0,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0.66183396182839,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,4.88369097422942,0.62799699626633,2.3503846290971,0,0,0,0,0,30.4965995013216,23.0162618253588,26.9260891316516,10.3111909406213,46.5856113444037,81.5825409180877,34.4261475118221,33.7740902418165,32.6262534468627,35.2077011991238,0.207574695168353,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p@chr11:48596086..48596090,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=432 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:48596086..48596090,+ | |||
|description=CAGE_peak_at_chr11:48596086..48596090,+ | |||
|id=chr11:48596086..48596090,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.99e-35!115;CL:0000004!2.99e-35!115;CL:0000255!2.99e-35!115;CL:0002371!2.93e-33!118;CL:0000144!1.01e-32!121;CL:0000012!1.01e-32!121;CL:0000034!2.29e-30!97;CL:0000723!7.00e-30!91;CL:0000048!7.00e-30!91;CL:0002321!1.51e-23!70;CL:0000220!1.51e-23!70;CL:0000055!1.92e-23!50;CL:0002319!4.61e-22!43;CL:0000221!4.31e-21!44;CL:0000133!4.31e-21!44;CL:0000393!5.45e-19!39;CL:0000211!5.45e-19!39;CL:0000540!4.17e-18!33;CL:0000047!4.17e-18!33;CL:0000031!4.17e-18!33;CL:0000404!4.17e-18!33;CL:0000219!4.72e-16!54;CL:0000117!3.14e-14!23;CL:0000337!3.14e-14!23;CL:0002320!3.88e-13!46;CL:0000134!3.88e-13!46;CL:0002031!4.05e-11!25;CL:0000063!3.58e-10!66;CL:0000839!3.94e-08!13;CL:0000988!8.11e-08!32;CL:0002032!8.11e-08!32;CL:0000037!8.11e-08!32;CL:0000566!8.11e-08!32;CL:0000837!8.11e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.79e-39,91;CL:0000048,5.79e-39,91;CL:0000034,1.19e-37,97;CL:0002321,7.38e-31,70;CL:0002319,1.47e-29,43;CL:0000221,1.45e-28,44;CL:0000133,1.45e-28,44;CL:0000540,1.20e-25,33;CL:0000047,1.20e-25,33;CL:0000031,1.20e-25,33;CL:0000404,1.20e-25,33;CL:0000393,1.44e-25,39;CL:0000211,1.44e-25,39;CL:0000117,1.05e-19,23;CL:0000337,1.05e-19,23;CL:0000219,1.79e-18,54;CL:0002320,1.13e-15,46;CL:0000134,1.13e-15,46;CL:0002031,3.33e-12,25;CL:0000839,8.54e-10,13;CL:0000988,5.60e-09,32;CL:0002032,5.60e-09,32;CL:0000037,5.60e-09,32;CL:0000837,5.60e-09,32;CL:0000763,2.38e-08,16;CL:0000107,4.64e-08,9;CL:0002453,8.34e-07,8;CL:0000050,9.97e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.02e-21!75;UBERON:0001016!1.02e-21!75;UBERON:0001017!1.17e-21!73;UBERON:0005743!1.17e-21!73;UBERON:0002020!2.28e-14!34;UBERON:0002384!3.88e-13!46;UBERON:0002791!6.25e-12!29;UBERON:0003528!6.25e-12!29;UBERON:0001893!6.25e-12!29;UBERON:0004121!8.18e-12!102;UBERON:0000924!8.18e-12!102;UBERON:0006601!8.18e-12!102;UBERON:0000955!8.35e-12!50;UBERON:0006238!8.35e-12!50;UBERON:0001049!1.08e-11!52;UBERON:0005068!1.08e-11!52;UBERON:0006241!1.08e-11!52;UBERON:0007135!1.08e-11!52;UBERON:0002616!1.38e-11!49;UBERON:0002780!1.30e-10!39;UBERON:0001890!1.30e-10!39;UBERON:0006240!1.30e-10!39;UBERON:0003080!1.44e-10!40;UBERON:0000956!4.64e-10!21;UBERON:0001869!4.64e-10!21;UBERON:0000203!4.64e-10!21;UBERON:0002619!1.61e-09!17;UBERON:0002346!6.58e-09!71;UBERON:0003075!6.58e-09!71;UBERON:0007284!6.58e-09!71;UBERON:0003056!1.63e-08!49;UBERON:0000033!2.93e-08!63;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10;UBERON:0007811!2.26e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.57e-24,73;UBERON:0001016,2.00e-23,75;UBERON:0002020,2.17e-20,34;UBERON:0003528,7.03e-17,29;UBERON:0002791,7.03e-17,29;UBERON:0001893,7.03e-17,29;UBERON:0004121,9.62e-16,95;UBERON:0000924,9.62e-16,95;UBERON:0006601,9.62e-16,95;UBERON:0002384,1.13e-15,46;UBERON:0000073,1.54e-14,54;UBERON:0000956,1.50e-13,21;UBERON:0001869,1.50e-13,21;UBERON:0000203,1.50e-13,21;UBERON:0002619,2.06e-12,17;UBERON:0001049,5.65e-12,52;UBERON:0005068,5.65e-12,52;UBERON:0006241,5.65e-12,52;UBERON:0007135,5.65e-12,52;UBERON:0002346,4.34e-11,64;UBERON:0003075,4.34e-11,64;UBERON:0007284,4.34e-11,64;UBERON:0002021,5.01e-11,10;UBERON:0000411,5.01e-11,10;UBERON:0001950,5.01e-11,10;UBERON:0002780,1.89e-10,39;UBERON:0001890,1.89e-10,39;UBERON:0006240,1.89e-10,39;UBERON:0003080,5.39e-10,40;UBERON:0002616,1.44e-09,46;UBERON:0000955,3.42e-09,47;UBERON:0006238,3.42e-09,47;UBERON:0010371,1.98e-08,73;UBERON:0002410,4.64e-08,9;UBERON:0002371,4.86e-08,16;UBERON:0011216,1.20e-07,194;UBERON:0003056,2.14e-07,49 | |||
|phase1_expression=0,0,0,1.20985684522732,7.01254021924886,0,0.934450562382103,5.03580961422147,2.956563165185,4.68129052643987,1.71217968225505,1.19658238493005,5.13602189793617,2.01066925563694,20.9859149943868,0.404950534779652,12.5921138063066,3.47008381894061,4.52477630898938,17.8243653755173,0,0.595745707205312,1.82839852397255,0.319984845586813,0.91763712426868,0,0,0,1.71021077510736,0,0,130.816318732684,54.7407660950267,427.900538741685,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0.101376931219515,0,33.6428278069657,8.50298109883741,9.22681967484782,16.5265414213141,8.9591309840232,8.62515386189829,0.335565212115473,1.45072428402269,3.6970317905671,20.3234954468398,30.659078073447,47.9575045818021,15.578367486189,101.56626802023,19.0149421051854,8.13226876965917,4.4464739805557,16.1981949110652,137.452424396809,88.8100143682625,24.8668091730276,9.22123932771731,2.7996195323289,37.53165085621,15.3537221786509,15.996455126613,13.2521124570968,18.4961106814581,21.3735400370667,25.7381260250806,91.3961812294926,15.1947932321373,17.5111447912118,27.5642341356105,24.793151416253,13.022834263919,30.4309468911505,19.6966913511088,33.768412758675,28.2843442054721,5.26775218956681,8.94717339961443,0.227178579999552,0.151143120213571,1.73918693221007,2.58127163094416,13.599426674155,44.7953649059388,30.5394916200404,26.4335863387428,0.140444420131752,0,2.85764605063156,0.70667914902068,0,2.56652954828636,2.54805239706646,0,4.5463118612355,3.29367825117628,5.56076889516262,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.260240885925407,1.14951052216736,0,0,0.0680364991513279,0,0,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0,1.70542270593436,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0,0.144649058581512,28.6503439484617,17.9488875660174,0,0,0,0,0,0,14.8288863125641,10.9322848403059,33.3906266485838,17.2057534525837,18.9378872970035,19.5322806244294,13.3587531552715,11.3979784585412,22.9266911208984,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0,0,0,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0.66183396182839,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,4.88369097422942,0.62799699626633,2.3503846290971,0,0,0,0,0,30.4965995013216,23.0162618253588,26.9260891316516,10.3111909406213,46.5856113444037,81.5825409180877,34.4261475118221,33.7740902418165,32.6262534468627,35.2077011991238,0.207574695168353,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:48596086..48596090,+ | |||
}} |
Latest revision as of 23:20, 5 August 2015
Short description: | p@chr11:48596086..48596090, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:48596086..48596090, + |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.79e-39 | 91 |
multi fate stem cell | 5.79e-39 | 91 |
stem cell | 1.19e-37 | 97 |
embryonic cell | 7.38e-31 | 70 |
neural cell | 1.47e-29 | 43 |
ectodermal cell | 1.45e-28 | 44 |
neurectodermal cell | 1.45e-28 | 44 |
neuron | 1.20e-25 | 33 |
neuronal stem cell | 1.20e-25 | 33 |
neuroblast | 1.20e-25 | 33 |
electrically signaling cell | 1.20e-25 | 33 |
electrically responsive cell | 1.44e-25 | 39 |
electrically active cell | 1.44e-25 | 39 |
CNS neuron (sensu Vertebrata) | 1.05e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-19 | 23 |
motile cell | 1.79e-18 | 54 |
connective tissue cell | 1.13e-15 | 46 |
mesenchymal cell | 1.13e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 3.33e-12 | 25 |
myeloid lineage restricted progenitor cell | 8.54e-10 | 13 |
hematopoietic cell | 5.60e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.60e-09 | 32 |
hematopoietic stem cell | 5.60e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.60e-09 | 32 |
myeloid cell | 2.38e-08 | 16 |
autonomic neuron | 4.64e-08 | 9 |
oligodendrocyte precursor cell | 8.34e-07 | 8 |
megakaryocyte-erythroid progenitor cell | 9.97e-07 | 9 |