FFCP PHASE1:Mm9::chr13:102462268..102462284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18708|HGNC=|MCL_coexpression_id=2|UniProt=Q80UI5,P70304|association_with_transcript=317bp_to_ENSMUST00000035532,NM_001024955,uc007rrs.1_5end|description=CAGE_peak_10_at_Pik3r1_5end|id=chr13:102462268..102462284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.63e-09!10;UBERON:0000411!2.63e-09!10;UBERON:0001950!2.63e-09!10;UBERON:0002020!1.38e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.76e-24,10;UBERON:0000411,3.76e-24,10;UBERON:0001950,3.76e-24,10;UBERON:0002020,6.45e-15,34;UBERON:0002619,2.98e-13,17;UBERON:0000956,1.77e-12,21;UBERON:0001869,1.77e-12,21;UBERON:0000203,1.77e-12,21;UBERON:0001049,2.80e-12,52;UBERON:0005068,2.80e-12,52;UBERON:0006241,2.80e-12,52;UBERON:0007135,2.80e-12,52;UBERON:0000073,1.19e-11,54;UBERON:0002346,3.00e-10,64;UBERON:0003075,3.00e-10,64;UBERON:0007284,3.00e-10,64;UBERON:0003528,6.45e-10,29;UBERON:0002791,6.45e-10,29;UBERON:0001893,6.45e-10,29;UBERON:0010371,1.58e-09,73;UBERON:0001017,2.25e-09,73;UBERON:0001016,5.43e-09,75;UBERON:0004121,9.09e-09,95;UBERON:0000924,9.09e-09,95;UBERON:0006601,9.09e-09,95;UBERON:0002616,1.79e-08,46;UBERON:0000955,3.22e-08,47;UBERON:0006238,3.22e-08,47;UBERON:0002780,8.61e-08,39;UBERON:0001890,8.61e-08,39;UBERON:0006240,8.61e-08,39;UBERON:0001948,1.18e-07,5;UBERON:0002315,1.18e-07,5;UBERON:0002257,1.23e-07,3;UBERON:0003080,1.60e-07,40|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0.699561878128147,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.734187008646726,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,0,0,0,0,0,0.766124028511126,0.614426133024974,0.131886287730194,0.914876436024097,0,0.558365998002762,0,0.916789486660861,3.24091444021034,4.41352210477219,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.691846491768175,1.20578112442098,0.470354828542819,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0.11981512450592,0,0,0,1.37250180845588,0.376963056338593,2.60736480288415,2.04572365864264,1.0389402227978,0,0.203678727700633,0.622034853050465,0.758168275301024,1.26265113531884,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,0.517406741478031,0,0,0.703804496655795,0.43839146485515,1.11218899690239,2.089512999133,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.411618449517138,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,4.41498794087572,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,3.40656204499845,0.35613120733451,0,0.824850614862677,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0.441056796109924,0.98931751764888,0,0.301564624640779,0.238744688006273,0.164140899745061,0,0.927126510052548,0.170870880797853,0,0.185194527369712,1.88368457004691,1.23024804948923,0.686334519619568,1.5298058699447,0.69975726161829,1.10559979043539,0,0,0.813277868507395,0.86404272657441,1.67270636811575,0.87345025498471,0.809186078308924,1.07449492442937,0.785267825952089,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0,0.772758376128762,0.93841237725591,0,0.857473516316263,0,5.0827665835536,8.74617949363636,4.58316410751517,3.09335728218638,4.11049511862385,7.55393897389701,4.72515750162264,6.75481804836331,6.79713613476307,6.73088405277366,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.838452650511929,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.561849044819294,0.512201219238954,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0,0.290692833264657,0.470546902076653,0.592302255241736,0.73171189149109,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.695603506861264|short_description=p10@Pik3r1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18708 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80UI5,uniprot:P70304 | |||
|association_with_transcript=317bp_to_ENSMUST00000035532,NM_001024955,uc007rrs.1_5end | |||
|cluster_id=chr13:102462268..102462284,- | |||
|description=CAGE_peak_10_at_Pik3r1_5end | |||
|id=chr13:102462268..102462284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.63e-09!10;UBERON:0000411!2.63e-09!10;UBERON:0001950!2.63e-09!10;UBERON:0002020!1.38e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.76e-24,10;UBERON:0000411,3.76e-24,10;UBERON:0001950,3.76e-24,10;UBERON:0002020,6.45e-15,34;UBERON:0002619,2.98e-13,17;UBERON:0000956,1.77e-12,21;UBERON:0001869,1.77e-12,21;UBERON:0000203,1.77e-12,21;UBERON:0001049,2.80e-12,52;UBERON:0005068,2.80e-12,52;UBERON:0006241,2.80e-12,52;UBERON:0007135,2.80e-12,52;UBERON:0000073,1.19e-11,54;UBERON:0002346,3.00e-10,64;UBERON:0003075,3.00e-10,64;UBERON:0007284,3.00e-10,64;UBERON:0003528,6.45e-10,29;UBERON:0002791,6.45e-10,29;UBERON:0001893,6.45e-10,29;UBERON:0010371,1.58e-09,73;UBERON:0001017,2.25e-09,73;UBERON:0001016,5.43e-09,75;UBERON:0004121,9.09e-09,95;UBERON:0000924,9.09e-09,95;UBERON:0006601,9.09e-09,95;UBERON:0002616,1.79e-08,46;UBERON:0000955,3.22e-08,47;UBERON:0006238,3.22e-08,47;UBERON:0002780,8.61e-08,39;UBERON:0001890,8.61e-08,39;UBERON:0006240,8.61e-08,39;UBERON:0001948,1.18e-07,5;UBERON:0002315,1.18e-07,5;UBERON:0002257,1.23e-07,3;UBERON:0003080,1.60e-07,40 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0.699561878128147,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,0.734187008646726,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,0,0,0,0,0,0.766124028511126,0.614426133024974,0.131886287730194,0.914876436024097,0,0.558365998002762,0,0.916789486660861,3.24091444021034,4.41352210477219,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.691846491768175,1.20578112442098,0.470354828542819,0,0,0.433798070759735,0.884610551949874,0.323533699894818,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0.11981512450592,0,0,0,1.37250180845588,0.376963056338593,2.60736480288415,2.04572365864264,1.0389402227978,0,0.203678727700633,0.622034853050465,0.758168275301024,1.26265113531884,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,0.517406741478031,0,0,0.703804496655795,0.43839146485515,1.11218899690239,2.089512999133,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.411618449517138,0,0,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,4.41498794087572,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,3.40656204499845,0.35613120733451,0,0.824850614862677,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0.441056796109924,0.98931751764888,0,0.301564624640779,0.238744688006273,0.164140899745061,0,0.927126510052548,0.170870880797853,0,0.185194527369712,1.88368457004691,1.23024804948923,0.686334519619568,1.5298058699447,0.69975726161829,1.10559979043539,0,0,0.813277868507395,0.86404272657441,1.67270636811575,0.87345025498471,0.809186078308924,1.07449492442937,0.785267825952089,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0.680191150845634,0,0,0,0.772758376128762,0.93841237725591,0,0.857473516316263,0,5.0827665835536,8.74617949363636,4.58316410751517,3.09335728218638,4.11049511862385,7.55393897389701,4.72515750162264,6.75481804836331,6.79713613476307,6.73088405277366,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.838452650511929,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.561849044819294,0.512201219238954,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0,0.290692833264657,0.470546902076653,0.592302255241736,0.73171189149109,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.464810523557898,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p10@Pik3r1 | |||
}} |
Revision as of 13:01, 5 August 2015
Short description: | p10@Pik3r1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Pik3r1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 317bp_to_ENSMUST00000035532, NM_001024955, uc007rrs.1_5end |
EntrezGene: | 18708 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.76e-24 | 10 |
visual cortex | 3.76e-24 | 10 |
neocortex | 3.76e-24 | 10 |
gray matter | 6.45e-15 | 34 |
regional part of cerebral cortex | 2.98e-13 | 17 |
cerebral cortex | 1.77e-12 | 21 |
cerebral hemisphere | 1.77e-12 | 21 |
pallium | 1.77e-12 | 21 |
neural tube | 2.80e-12 | 52 |
neural rod | 2.80e-12 | 52 |
future spinal cord | 2.80e-12 | 52 |
neural keel | 2.80e-12 | 52 |
regional part of nervous system | 1.19e-11 | 54 |
neurectoderm | 3.00e-10 | 64 |
neural plate | 3.00e-10 | 64 |
presumptive neural plate | 3.00e-10 | 64 |
brain grey matter | 6.45e-10 | 29 |
regional part of telencephalon | 6.45e-10 | 29 |
telencephalon | 6.45e-10 | 29 |
ecto-epithelium | 1.58e-09 | 73 |
central nervous system | 2.25e-09 | 73 |
nervous system | 5.43e-09 | 75 |
ectoderm-derived structure | 9.09e-09 | 95 |
ectoderm | 9.09e-09 | 95 |
presumptive ectoderm | 9.09e-09 | 95 |
regional part of brain | 1.79e-08 | 46 |
brain | 3.22e-08 | 47 |
future brain | 3.22e-08 | 47 |
regional part of forebrain | 8.61e-08 | 39 |
forebrain | 8.61e-08 | 39 |
future forebrain | 8.61e-08 | 39 |
regional part of spinal cord | 1.18e-07 | 5 |
gray matter of spinal cord | 1.18e-07 | 5 |
ventral horn of spinal cord | 1.23e-07 | 3 |
anterior neural tube | 1.60e-07 | 40 |