FFCP PHASE1:Hg19::chr5:14143431..14143466,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |||
|TSSclassifier=weak | |||
|UniProt=O75962 | |||
|association_with_transcript=-344bp_to_ENST00000344204,ENST00000502816,ENST00000505971_5end | |||
|description=CAGE_peak_1_at_TRIO_5end | |||
|id=chr5:14143431..14143466,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.01e-07!246;CL:0002321!3.87e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.41e-08;33!CL:0002057;8.41e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.20e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!3.32e-23!625;UBERON:0000480!7.47e-23!626;UBERON:0000468!8.25e-22!659;UBERON:0002050!4.78e-17!605;UBERON:0005423!4.78e-17!605;UBERON:0000923!5.95e-17!604;UBERON:0005291!5.95e-17!604;UBERON:0006598!5.95e-17!604;UBERON:0002532!5.95e-17!604;UBERON:0000922!1.29e-16!612;UBERON:0000062!8.35e-16!511;UBERON:0000475!1.81e-12!365;UBERON:0001017!4.25e-12!82;UBERON:0005743!2.06e-11!86;UBERON:0004121!2.48e-11!169;UBERON:0000073!3.89e-11!94;UBERON:0001016!3.89e-11!94;UBERON:0000955!2.06e-10!69;UBERON:0006238!2.06e-10!69;UBERON:0000119!2.34e-10!312;UBERON:0000483!2.37e-10!309;UBERON:0000033!2.94e-10!123;UBERON:0000924!3.63e-10!173;UBERON:0006601!3.63e-10!173;UBERON:0001869!1.41e-09!32;UBERON:0000956!1.57e-09!25;UBERON:0000203!1.57e-09!25;UBERON:0004111!1.64e-09!241;UBERON:0002020!2.44e-09!34;UBERON:0003528!2.44e-09!34;UBERON:0001893!3.86e-09!34;UBERON:0002791!5.16e-09!33;UBERON:0000477!6.23e-09!286;UBERON:0000481!8.07e-09!347;UBERON:0000153!9.60e-09!129;UBERON:0007811!9.60e-09!129;UBERON:0002619!2.65e-08!22;UBERON:0002616!3.96e-08!59;UBERON:0001049!4.44e-08!57;UBERON:0005068!4.44e-08!57;UBERON:0006241!4.44e-08!57;UBERON:0007135!4.44e-08!57;UBERON:0000025!5.18e-08!194;UBERON:0003080!9.05e-08!42;UBERON:0001950!1.14e-07!20;UBERON:0002780!1.73e-07!41;UBERON:0001890!1.73e-07!41;UBERON:0006240!1.73e-07!41;UBERON:0003075!3.75e-07!86;UBERON:0007284!3.75e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.11e-09;25!UBERON:0000203;2.11e-09;25!UBERON:0001869;1.18e-08;32!UBERON:0002791;1.93e-08;32!UBERON:0002619;3.49e-08;22!UBERON:0001893;4.51e-08;34!UBERON:0003528;5.10e-08;34!UBERON:0002020;5.10e-08;34!UBERON:0001950;1.52e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.38e-16,592;UBERON:0005423,2.99e-15,581;UBERON:0000923,1.60e-13,560;UBERON:0010316,1.60e-13,560;UBERON:0005291,1.60e-13,560;UBERON:0006598,1.60e-13,560;UBERON:0010317,1.60e-13,560;UBERON:0002532,1.60e-13,560;UBERON:0002050,2.17e-13,564;UBERON:0001017,8.12e-12,81;UBERON:0001016,1.77e-11,89;UBERON:0000955,3.89e-10,68;UBERON:0006238,3.89e-10,68;UBERON:0004121,1.34e-09,171;UBERON:0000924,1.34e-09,171;UBERON:0006601,1.34e-09,171;UBERON:0001869,1.40e-09,32;UBERON:0000956,1.57e-09,25;UBERON:0000203,1.57e-09,25;UBERON:0000119,1.74e-09,309;UBERON:0000483,1.76e-09,306;UBERON:0003528,2.43e-09,34;UBERON:0002020,2.43e-09,34;UBERON:0002791,2.43e-09,32;UBERON:0004111,3.54e-09,240;UBERON:0001893,3.84e-09,34;UBERON:0002619,2.64e-08,22;UBERON:0001049,8.17e-08,56;UBERON:0005068,8.17e-08,56;UBERON:0006241,8.17e-08,56;UBERON:0007135,8.17e-08,56;UBERON:0000073,1.10e-07,53;UBERON:0002616,1.10e-07,53;UBERON:0001950,1.13e-07,20;UBERON:0000025,1.23e-07,192;UBERON:0002780,1.72e-07,41;UBERON:0001890,1.72e-07,41;UBERON:0003080,1.72e-07,41;UBERON:0006240,1.72e-07,41 | |||
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| |||
|short_description=p1@TRIO | |||
}} |
Revision as of 04:42, 22 January 2014
Short description: | p1@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIO_5end |
Coexpression cluster: | NA |
Association with transcript: | -344bp_to_ENST00000344204, ENST00000502816, ENST00000505971_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | O75962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.20e-07 | 250 |