FFCP PHASE1:Mm9::chr18:36953572..36953591,+: Difference between revisions
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{{FFCP|EntrezGene=66492|HGNC=|MCL_coexpression_id=2|UniProt=Q9CPW7|association_with_transcript=0bp_to_ENSMUST00000001419,NM_025594,uc008eos.1_5end|description=CAGE_peak_1_at_Zmat2_5end|id=chr18:36953572..36953591,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.48e-11!50;UBERON:0006238!1.48e-11!50;UBERON:0000073!3.64e-11!75;UBERON:0001016!3.64e-11!75;UBERON:0002616!4.49e-11!49;UBERON:0001017!5.11e-11!73;UBERON:0005743!5.11e-11!73;UBERON:0000153!1.65e-10!94;UBERON:0002791!2.59e-10!29;UBERON:0003528!2.59e-10!29;UBERON:0001893!2.59e-10!29;UBERON:0001049!4.76e-10!52;UBERON:0005068!4.76e-10!52;UBERON:0006241!4.76e-10!52;UBERON:0007135!4.76e-10!52;UBERON:0002020!5.47e-10!34;UBERON:0007811!1.31e-09!86;UBERON:0000956!4.32e-09!21;UBERON:0001869!4.32e-09!21;UBERON:0000203!4.32e-09!21;UBERON:0003080!5.53e-09!40;UBERON:0000033!6.69e-09!63;UBERON:0002780!1.33e-08!39;UBERON:0001890!1.33e-08!39;UBERON:0006240!1.33e-08!39;UBERON:0004121!1.60e-08!102;UBERON:0000924!1.60e-08!102;UBERON:0006601!1.60e-08!102;UBERON:0002619!1.63e-08!17;UBERON:0002346!2.99e-08!71;UBERON:0003075!2.99e-08!71;UBERON:0007284!2.99e-08!71;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0003056!6.16e-08!49;UBERON:0000064!2.68e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.64e-11,75;UBERON:0000073,4.59e-11,54;UBERON:0001017,5.11e-11,73;UBERON:0003528,2.59e-10,29;UBERON:0002791,2.59e-10,29;UBERON:0001893,2.59e-10,29;UBERON:0002346,3.81e-10,64;UBERON:0003075,3.81e-10,64;UBERON:0007284,3.81e-10,64;UBERON:0001049,4.76e-10,52;UBERON:0005068,4.76e-10,52;UBERON:0006241,4.76e-10,52;UBERON:0007135,4.76e-10,52;UBERON:0000955,4.97e-10,47;UBERON:0006238,4.97e-10,47;UBERON:0004121,5.35e-10,95;UBERON:0000924,5.35e-10,95;UBERON:0006601,5.35e-10,95;UBERON:0002020,5.47e-10,34;UBERON:0002616,1.44e-09,46;UBERON:0000956,4.32e-09,21;UBERON:0001869,4.32e-09,21;UBERON:0000203,4.32e-09,21;UBERON:0003080,5.53e-09,40;UBERON:0002780,1.33e-08,39;UBERON:0001890,1.33e-08,39;UBERON:0006240,1.33e-08,39;UBERON:0002619,1.63e-08,17;UBERON:0010371,1.75e-08,73;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0003056,6.16e-08,49|phase1_expression=27.7057505491294,34.5485653562967,24.5699589270349,42.3449895829562,35.0627010962443,28.5394762250213,63.3090256013875,70.5013345991006,49.5576301973867,71.389680528208,76.1919958603497,75.3049180915976,53.5858284684674,68.537595496494,76.2821354557868,80.1802058863711,115.427709891144,63.2501641543267,60.7416940873423,44.1365237869951,47.2840693239948,58.7802431109241,108.397912492658,85.2759613488858,78.6873834060393,34.4539178469012,33.1686737042488,39.2157643488318,72.7789696517912,25.9591033652729,45.0112936630269,37.4668097341182,47.9750534315965,15.8481681015439,24.8412392986096,29.2572975830947,21.2336130512864,40.59756818148,56.2561448057136,50.2582794214846,33.5291948177678,35.5183652178392,37.86980753643,40.0351881162336,40.6521494190253,49.9247165879774,32.0780451182696,54.7243142514921,43.2781779986909,65.1340161898849,52.0749488446349,34.5006154475932,83.5557378167527,78.3391113372252,74.612823409627,41.9332880738594,48.7106847895886,53.1142255045766,44.1049884673923,40.2033144246745,48.8050180699758,22.7025836486319,35.5717918444456,29.6966906702862,26.6993917893083,28.419204597844,17.6764065205859,28.0479362884735,61.0731816496933,54.9474169009981,72.3517867048754,47.1324124266276,72.003144350226,80.2314734857949,68.2419753649843,88.245003514562,88.092704799511,119.387661109651,132.408831666882,49.8530167620133,59.4669683415663,69.8023916546058,108.043820613534,103.548320245829,130.642501849173,52.7385167997865,68.7655218259667,58.7158254349697,65.0488000732051,54.260380156672,62.6107295595624,39.5794983411438,37.3984233539263,57.2085383136086,66.9269709971099,69.8921943871843,69.5199879652172,64.5930922570839,91.7044596248127,96.1083642668125,26.3377194982393,57.746914836443,112.114305470924,85.3280043783997,53.6897781707811,52.4454921533454,73.8065689721584,51.0401942344198,114.191606688403,54.9235914539852,44.9326996324292,37.1447883540812,43.1250979868829,51.9993109906548,49.6224344112674,47.1249717486283,79.5967796104684,63.0453196170815,71.6534547079398,51.7653919831709,58.7438439104647,68.8522859452015,85.7402101603362,92.5187318556489,67.651286300746,48.2813834344238,39.7786213359655,63.5896894853012,36.3420849428965,84.9312925425345,111.630147087745,44.481640647954,120.63407821344,110.213362109372,98.0759570321124,109.675093833804,40.2265487208749,52.6241485680693,62.6752440915513,73.4442077043794,58.9445606621048,60.9240576748703,76.1662809076627,53.3495055138431,39.8693885026781,47.786417666249,44.8831260641101,48.1188269574569,79.3290213992859,84.5304178350152,63.3424046990216,55.2373245717489,42.8192763807421,56.7651031431131,52.4744447840256,51.3508408391712,84.9677956649014,83.6380698122824,48.023631397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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66492 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CPW7 | |||
|association_with_transcript=0bp_to_ENSMUST00000001419,NM_025594,uc008eos.1_5end | |||
|cluster_id=chr18:36953572..36953591,+ | |||
|description=CAGE_peak_1_at_Zmat2_5end | |||
|id=chr18:36953572..36953591,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.48e-11!50;UBERON:0006238!1.48e-11!50;UBERON:0000073!3.64e-11!75;UBERON:0001016!3.64e-11!75;UBERON:0002616!4.49e-11!49;UBERON:0001017!5.11e-11!73;UBERON:0005743!5.11e-11!73;UBERON:0000153!1.65e-10!94;UBERON:0002791!2.59e-10!29;UBERON:0003528!2.59e-10!29;UBERON:0001893!2.59e-10!29;UBERON:0001049!4.76e-10!52;UBERON:0005068!4.76e-10!52;UBERON:0006241!4.76e-10!52;UBERON:0007135!4.76e-10!52;UBERON:0002020!5.47e-10!34;UBERON:0007811!1.31e-09!86;UBERON:0000956!4.32e-09!21;UBERON:0001869!4.32e-09!21;UBERON:0000203!4.32e-09!21;UBERON:0003080!5.53e-09!40;UBERON:0000033!6.69e-09!63;UBERON:0002780!1.33e-08!39;UBERON:0001890!1.33e-08!39;UBERON:0006240!1.33e-08!39;UBERON:0004121!1.60e-08!102;UBERON:0000924!1.60e-08!102;UBERON:0006601!1.60e-08!102;UBERON:0002619!1.63e-08!17;UBERON:0002346!2.99e-08!71;UBERON:0003075!2.99e-08!71;UBERON:0007284!2.99e-08!71;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0003056!6.16e-08!49;UBERON:0000064!2.68e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.64e-11,75;UBERON:0000073,4.59e-11,54;UBERON:0001017,5.11e-11,73;UBERON:0003528,2.59e-10,29;UBERON:0002791,2.59e-10,29;UBERON:0001893,2.59e-10,29;UBERON:0002346,3.81e-10,64;UBERON:0003075,3.81e-10,64;UBERON:0007284,3.81e-10,64;UBERON:0001049,4.76e-10,52;UBERON:0005068,4.76e-10,52;UBERON:0006241,4.76e-10,52;UBERON:0007135,4.76e-10,52;UBERON:0000955,4.97e-10,47;UBERON:0006238,4.97e-10,47;UBERON:0004121,5.35e-10,95;UBERON:0000924,5.35e-10,95;UBERON:0006601,5.35e-10,95;UBERON:0002020,5.47e-10,34;UBERON:0002616,1.44e-09,46;UBERON:0000956,4.32e-09,21;UBERON:0001869,4.32e-09,21;UBERON:0000203,4.32e-09,21;UBERON:0003080,5.53e-09,40;UBERON:0002780,1.33e-08,39;UBERON:0001890,1.33e-08,39;UBERON:0006240,1.33e-08,39;UBERON:0002619,1.63e-08,17;UBERON:0010371,1.75e-08,73;UBERON:0002021,3.59e-08,10;UBERON:0000411,3.59e-08,10;UBERON:0001950,3.59e-08,10;UBERON:0003056,6.16e-08,49 | |||
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| |||
|short_description=p1@Zmat2 | |||
}} |
Revision as of 17:41, 5 August 2015
Short description: | p1@Zmat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zmat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000001419, NM_025594, uc008eos.1_5end |
EntrezGene: | 66492 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.64e-11 | 75 |
regional part of nervous system | 4.59e-11 | 54 |
central nervous system | 5.11e-11 | 73 |
brain grey matter | 2.59e-10 | 29 |
regional part of telencephalon | 2.59e-10 | 29 |
telencephalon | 2.59e-10 | 29 |
neurectoderm | 3.81e-10 | 64 |
neural plate | 3.81e-10 | 64 |
presumptive neural plate | 3.81e-10 | 64 |
neural tube | 4.76e-10 | 52 |
neural rod | 4.76e-10 | 52 |
future spinal cord | 4.76e-10 | 52 |
neural keel | 4.76e-10 | 52 |
brain | 4.97e-10 | 47 |
future brain | 4.97e-10 | 47 |
ectoderm-derived structure | 5.35e-10 | 95 |
ectoderm | 5.35e-10 | 95 |
presumptive ectoderm | 5.35e-10 | 95 |
gray matter | 5.47e-10 | 34 |
regional part of brain | 1.44e-09 | 46 |
cerebral cortex | 4.32e-09 | 21 |
cerebral hemisphere | 4.32e-09 | 21 |
pallium | 4.32e-09 | 21 |
anterior neural tube | 5.53e-09 | 40 |
regional part of forebrain | 1.33e-08 | 39 |
forebrain | 1.33e-08 | 39 |
future forebrain | 1.33e-08 | 39 |
regional part of cerebral cortex | 1.63e-08 | 17 |
ecto-epithelium | 1.75e-08 | 73 |
occipital lobe | 3.59e-08 | 10 |
visual cortex | 3.59e-08 | 10 |
neocortex | 3.59e-08 | 10 |
pre-chordal neural plate | 6.16e-08 | 49 |