FFCP PHASE1:Mm9::chr2:70401593..70401604,+: Difference between revisions
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{{FFCP|EntrezGene=14415|HGNC=|MCL_coexpression_id=20|UniProt=D3Z5S3|association_with_transcript=94bp_to_ENSMUST00000123330_5end|description=CAGE_peak_15_at_Gad1_5end|id=chr2:70401593..70401604,+|ontology_enrichment_celltype=CL:0000117!2.88e-21!23;CL:0000337!2.88e-21!23;CL:0000540!1.87e-13!33;CL:0000047!1.87e-13!33;CL:0000031!1.87e-13!33;CL:0000404!1.87e-13!33;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000221!3.56e-10!44;CL:0000133!3.56e-10!44;CL:0002319!2.55e-09!43;CL:0002610!1.39e-07!3;CL:0000055!1.94e-07!50;CL:0002614!2.45e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,2.38e-23,3;CL:0002614,1.83e-22,3;CL:0000117,2.60e-15,23;CL:0000337,2.60e-15,23;CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0000393,7.50e-09,39;CL:0000211,7.50e-09,39;CL:0002319,5.55e-08,43;CL:0000221,8.66e-08,44;CL:0000133,8.66e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.77e-32!52;UBERON:0005068!5.77e-32!52;UBERON:0006241!5.77e-32!52;UBERON:0007135!5.77e-32!52;UBERON:0000033!1.36e-28!63;UBERON:0002616!3.17e-28!49;UBERON:0001017!8.45e-28!73;UBERON:0005743!8.45e-28!73;UBERON:0002346!1.41e-27!71;UBERON:0003075!1.41e-27!71;UBERON:0007284!1.41e-27!71;UBERON:0000955!1.67e-27!50;UBERON:0006238!1.67e-27!50;UBERON:0002020!2.11e-27!34;UBERON:0000073!8.16e-27!75;UBERON:0001016!8.16e-27!75;UBERON:0004121!1.06e-23!102;UBERON:0000924!1.06e-23!102;UBERON:0006601!1.06e-23!102;UBERON:0003056!1.62e-20!49;UBERON:0002791!4.06e-20!29;UBERON:0003528!4.06e-20!29;UBERON:0001893!4.06e-20!29;UBERON:0003080!7.39e-19!40;UBERON:0007811!1.27e-18!86;UBERON:0002780!2.07e-17!39;UBERON:0001890!2.07e-17!39;UBERON:0006240!2.07e-17!39;UBERON:0000153!2.63e-16!94;UBERON:0002420!7.09e-16!8;UBERON:0007245!7.09e-16!8;UBERON:0010009!7.09e-16!8;UBERON:0010011!7.09e-16!8;UBERON:0000454!7.09e-16!8;UBERON:0003076!1.50e-14!12;UBERON:0003057!1.50e-14!12;UBERON:0002298!3.58e-13!6;UBERON:0002021!3.83e-11!10;UBERON:0000411!3.83e-11!10;UBERON:0001950!3.83e-11!10;UBERON:0002240!4.46e-11!6;UBERON:0005174!4.46e-11!6;UBERON:0001137!4.46e-11!6;UBERON:0000025!5.92e-11!114;UBERON:0004111!1.61e-10!122;UBERON:0000369!3.89e-10!5;UBERON:0002435!3.89e-10!5;UBERON:0000204!3.89e-10!5;UBERON:0010082!3.89e-10!5;UBERON:0002950!3.39e-09!4;UBERON:0001891!3.39e-09!4;UBERON:0009616!3.39e-09!4;UBERON:0001948!3.70e-09!5;UBERON:0002315!3.70e-09!5;UBERON:0002619!4.33e-09!17;UBERON:0000956!1.24e-08!21;UBERON:0001869!1.24e-08!21;UBERON:0000203!1.24e-08!21;UBERON:0004684!1.39e-07!3;UBERON:0002275!1.39e-07!3;UBERON:0002038!2.45e-07!3;UBERON:0002308!2.45e-07!3;UBERON:0009663!2.45e-07!3;UBERON:0009661!2.45e-07!3;UBERON:0006331!2.45e-07!3;UBERON:0000125!2.45e-07!3;UBERON:0000475!3.20e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002950,3.39e-29,4;UBERON:0001891,3.39e-29,4;UBERON:0009616,3.39e-29,4;UBERON:0010286,3.39e-29,4;UBERON:0004684,2.38e-23,3;UBERON:0002275,2.38e-23,3;UBERON:0002038,1.83e-22,3;UBERON:0009663,1.83e-22,3;UBERON:0009661,1.83e-22,3;UBERON:0000125,1.83e-22,3;UBERON:0002308,1.83e-22,3;UBERON:0001896,4.09e-16,2;UBERON:0002298,4.09e-16,2;UBERON:0005290,4.09e-16,2;UBERON:0010096,4.09e-16,2;UBERON:0000073,1.39e-15,54;UBERON:0002420,9.03e-15,8;UBERON:0007245,9.03e-15,8;UBERON:0010009,9.03e-15,8;UBERON:0010011,9.03e-15,8;UBERON:0000454,9.03e-15,8;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,1.31e-10,52;UBERON:0005068,1.31e-10,52;UBERON:0006241,1.31e-10,52;UBERON:0007135,1.31e-10,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.62e-09,46;UBERON:0000955,2.67e-09,47;UBERON:0006238,2.67e-09,47;UBERON:0002346,1.81e-08,64;UBERON:0003075,1.81e-08,64;UBERON:0007284,1.81e-08,64;UBERON:0002259,2.06e-08,1;UBERON:0002314,2.06e-08,1;UBERON:0004061,2.06e-08,1;UBERON:0006777,2.06e-08,1;UBERON:0005882,2.06e-08,1;UBERON:0010371,2.56e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.367472397644862,0.0958454710182364,0,4.40463523997555,1.53224805702225,3.07213066512487,0.527545150920775,0.640413505216868,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,0.753926112677186,0.869121600961382,0,1.0389402227978,0.973447578406546,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14415 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z5S3 | |||
|association_with_transcript=94bp_to_ENSMUST00000123330_5end | |||
|cluster_id=chr2:70401593..70401604,+ | |||
|description=CAGE_peak_15_at_Gad1_5end | |||
|id=chr2:70401593..70401604,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.88e-21!23;CL:0000337!2.88e-21!23;CL:0000540!1.87e-13!33;CL:0000047!1.87e-13!33;CL:0000031!1.87e-13!33;CL:0000404!1.87e-13!33;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000221!3.56e-10!44;CL:0000133!3.56e-10!44;CL:0002319!2.55e-09!43;CL:0002610!1.39e-07!3;CL:0000055!1.94e-07!50;CL:0002614!2.45e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.38e-23,3;CL:0002614,1.83e-22,3;CL:0000117,2.60e-15,23;CL:0000337,2.60e-15,23;CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0000393,7.50e-09,39;CL:0000211,7.50e-09,39;CL:0002319,5.55e-08,43;CL:0000221,8.66e-08,44;CL:0000133,8.66e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.77e-32!52;UBERON:0005068!5.77e-32!52;UBERON:0006241!5.77e-32!52;UBERON:0007135!5.77e-32!52;UBERON:0000033!1.36e-28!63;UBERON:0002616!3.17e-28!49;UBERON:0001017!8.45e-28!73;UBERON:0005743!8.45e-28!73;UBERON:0002346!1.41e-27!71;UBERON:0003075!1.41e-27!71;UBERON:0007284!1.41e-27!71;UBERON:0000955!1.67e-27!50;UBERON:0006238!1.67e-27!50;UBERON:0002020!2.11e-27!34;UBERON:0000073!8.16e-27!75;UBERON:0001016!8.16e-27!75;UBERON:0004121!1.06e-23!102;UBERON:0000924!1.06e-23!102;UBERON:0006601!1.06e-23!102;UBERON:0003056!1.62e-20!49;UBERON:0002791!4.06e-20!29;UBERON:0003528!4.06e-20!29;UBERON:0001893!4.06e-20!29;UBERON:0003080!7.39e-19!40;UBERON:0007811!1.27e-18!86;UBERON:0002780!2.07e-17!39;UBERON:0001890!2.07e-17!39;UBERON:0006240!2.07e-17!39;UBERON:0000153!2.63e-16!94;UBERON:0002420!7.09e-16!8;UBERON:0007245!7.09e-16!8;UBERON:0010009!7.09e-16!8;UBERON:0010011!7.09e-16!8;UBERON:0000454!7.09e-16!8;UBERON:0003076!1.50e-14!12;UBERON:0003057!1.50e-14!12;UBERON:0002298!3.58e-13!6;UBERON:0002021!3.83e-11!10;UBERON:0000411!3.83e-11!10;UBERON:0001950!3.83e-11!10;UBERON:0002240!4.46e-11!6;UBERON:0005174!4.46e-11!6;UBERON:0001137!4.46e-11!6;UBERON:0000025!5.92e-11!114;UBERON:0004111!1.61e-10!122;UBERON:0000369!3.89e-10!5;UBERON:0002435!3.89e-10!5;UBERON:0000204!3.89e-10!5;UBERON:0010082!3.89e-10!5;UBERON:0002950!3.39e-09!4;UBERON:0001891!3.39e-09!4;UBERON:0009616!3.39e-09!4;UBERON:0001948!3.70e-09!5;UBERON:0002315!3.70e-09!5;UBERON:0002619!4.33e-09!17;UBERON:0000956!1.24e-08!21;UBERON:0001869!1.24e-08!21;UBERON:0000203!1.24e-08!21;UBERON:0004684!1.39e-07!3;UBERON:0002275!1.39e-07!3;UBERON:0002038!2.45e-07!3;UBERON:0002308!2.45e-07!3;UBERON:0009663!2.45e-07!3;UBERON:0009661!2.45e-07!3;UBERON:0006331!2.45e-07!3;UBERON:0000125!2.45e-07!3;UBERON:0000475!3.20e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,3.39e-29,4;UBERON:0001891,3.39e-29,4;UBERON:0009616,3.39e-29,4;UBERON:0010286,3.39e-29,4;UBERON:0004684,2.38e-23,3;UBERON:0002275,2.38e-23,3;UBERON:0002038,1.83e-22,3;UBERON:0009663,1.83e-22,3;UBERON:0009661,1.83e-22,3;UBERON:0000125,1.83e-22,3;UBERON:0002308,1.83e-22,3;UBERON:0001896,4.09e-16,2;UBERON:0002298,4.09e-16,2;UBERON:0005290,4.09e-16,2;UBERON:0010096,4.09e-16,2;UBERON:0000073,1.39e-15,54;UBERON:0002420,9.03e-15,8;UBERON:0007245,9.03e-15,8;UBERON:0010009,9.03e-15,8;UBERON:0010011,9.03e-15,8;UBERON:0000454,9.03e-15,8;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,1.31e-10,52;UBERON:0005068,1.31e-10,52;UBERON:0006241,1.31e-10,52;UBERON:0007135,1.31e-10,52;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.62e-09,46;UBERON:0000955,2.67e-09,47;UBERON:0006238,2.67e-09,47;UBERON:0002346,1.81e-08,64;UBERON:0003075,1.81e-08,64;UBERON:0007284,1.81e-08,64;UBERON:0002259,2.06e-08,1;UBERON:0002314,2.06e-08,1;UBERON:0004061,2.06e-08,1;UBERON:0006777,2.06e-08,1;UBERON:0005882,2.06e-08,1;UBERON:0010371,2.56e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.367472397644862,0.0958454710182364,0,4.40463523997555,1.53224805702225,3.07213066512487,0.527545150920775,0.640413505216868,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,0.294628585473668,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,0.753926112677186,0.869121600961382,0,1.0389402227978,0.973447578406546,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p15@Gad1 | |||
}} |
Revision as of 09:53, 5 August 2015
Short description: | p15@Gad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Gad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 94bp_to_ENSMUST00000123330_5end |
EntrezGene: | 14415 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.38e-23 | 3 |
neuron of the substantia nigra | 1.83e-22 | 3 |
CNS neuron (sensu Vertebrata) | 2.60e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.60e-15 | 23 |
neuron | 1.52e-10 | 33 |
neuronal stem cell | 1.52e-10 | 33 |
neuroblast | 1.52e-10 | 33 |
electrically signaling cell | 1.52e-10 | 33 |
electrically responsive cell | 7.50e-09 | 39 |
electrically active cell | 7.50e-09 | 39 |
neural cell | 5.55e-08 | 43 |
ectodermal cell | 8.66e-08 | 44 |
neurectodermal cell | 8.66e-08 | 44 |