FFCP PHASE1:Mm9::chr3:129763728..129763744,-: Difference between revisions
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{{FFCP|EntrezGene=99683|HGNC=|MCL_coexpression_id=321|UniProt=Q80ZX0,Q3U882|association_with_transcript=80bp_to_ENSMUST00000001079,ENSMUST00000098616,NM_207209,uc008rit.1_5end|description=CAGE_peak_4_at_Sec24b_5end|id=chr3:129763728..129763744,-|ontology_enrichment_celltype=CL:0000540!1.87e-15!33;CL:0000047!1.87e-15!33;CL:0000031!1.87e-15!33;CL:0000404!1.87e-15!33;CL:0000221!9.18e-13!44;CL:0000133!9.18e-13!44;CL:0002319!1.95e-12!43;CL:0000117!4.38e-12!23;CL:0000337!4.38e-12!23;CL:0000393!6.91e-12!39;CL:0000211!6.91e-12!39;CL:0000055!2.92e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.56e-19,33;CL:0000047,1.56e-19,33;CL:0000031,1.56e-19,33;CL:0000404,1.56e-19,33;CL:0000393,1.91e-15,39;CL:0000211,1.91e-15,39;CL:0000221,3.74e-15,44;CL:0000133,3.74e-15,44;CL:0000117,8.25e-15,23;CL:0000337,8.25e-15,23;CL:0002319,1.04e-14,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.33e-22!102;UBERON:0000924!7.33e-22!102;UBERON:0006601!7.33e-22!102;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0000073!5.94e-20!75;UBERON:0001016!5.94e-20!75;UBERON:0000033!1.91e-17!63;UBERON:0002346!7.26e-17!71;UBERON:0003075!7.26e-17!71;UBERON:0007284!7.26e-17!71;UBERON:0003056!1.18e-15!49;UBERON:0001049!2.04e-13!52;UBERON:0005068!2.04e-13!52;UBERON:0006241!2.04e-13!52;UBERON:0007135!2.04e-13!52;UBERON:0000153!3.36e-13!94;UBERON:0000955!9.75e-13!50;UBERON:0006238!9.75e-13!50;UBERON:0002616!2.99e-12!49;UBERON:0007811!7.54e-12!86;UBERON:0002020!2.05e-11!34;UBERON:0003080!2.13e-11!40;UBERON:0002780!6.69e-11!39;UBERON:0001890!6.69e-11!39;UBERON:0006240!6.69e-11!39;UBERON:0000468!6.22e-09!333;UBERON:0002791!9.78e-09!29;UBERON:0003528!9.78e-09!29;UBERON:0001893!9.78e-09!29;UBERON:0000922!5.74e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.47e-21,95;UBERON:0000924,1.47e-21,95;UBERON:0006601,1.47e-21,95;UBERON:0001017,2.15e-21,73;UBERON:0001016,2.81e-20,75;UBERON:0002346,5.28e-19,64;UBERON:0003075,5.28e-19,64;UBERON:0007284,5.28e-19,64;UBERON:0010371,2.80e-16,73;UBERON:0003056,1.30e-14,49;UBERON:0000073,1.53e-14,54;UBERON:0010314,5.52e-14,92;UBERON:0001049,2.23e-12,52;UBERON:0005068,2.23e-12,52;UBERON:0006241,2.23e-12,52;UBERON:0007135,2.23e-12,52;UBERON:0002020,6.27e-11,34;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0002616,1.13e-09,46;UBERON:0003080,1.98e-09,40;UBERON:0002780,7.53e-09,39;UBERON:0001890,7.53e-09,39;UBERON:0006240,7.53e-09,39;UBERON:0003528,1.21e-07,29;UBERON:0002791,1.21e-07,29;UBERON:0001893,1.21e-07,29;UBERON:0000970,4.38e-07,9;UBERON:0000019,4.38e-07,9;UBERON:0000047,4.38e-07,9;UBERON:0010312,4.38e-07,9;UBERON:0004088,4.38e-07,9;UBERON:0002104,4.38e-07,9;UBERON:0001456,4.38e-07,9;UBERON:0003072,4.38e-07,9;UBERON:0004128,4.38e-07,9;UBERON:0003071,4.38e-07,9;UBERON:0000020,6.45e-07,12;UBERON:0001032,6.45e-07,12;UBERON:0004456,6.45e-07,12|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0.558405112967355,0.342401459862411,0.174840804837995,0,0,0,0,0.411343300817216,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,1.30815093828268,0.878744730937887,0.388859798148567,0.55994568650145,0,0.167782606057736,0,0,1.02903774414379,0,0,4.24864567805155,3.1739458756322,3.80298842103708,1.0165335962074,0.889294796111139,0,0,0,1.19840044207362,1.15265491596466,3.7328260431052,2.97013064329719,2.73422449756797,3.14216082844184,1.98781686856452,2.69479758272899,3.54628242767475,0.919218786610021,5.50579404996943,1.91531007127782,1.38245879930619,3.56092976871523,3.7509933876988,5.73004707612436,0.558365998002762,1.68828783009504,1.37518422999129,4.12480019663135,3.41692033917847,3.54158947068071,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0.776813650941515,0.445326417194474,0.346970653532272,0.304465478312141,1.15307748628029,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.433798070759735,0,0.808834249737046,0,0,0,0.292780797011547,1.04723353406728,0.255457055208591,0.239630249011841,0,0,2.69623150928681,3.20250421973039,2.89005009859588,1.91206752211504,2.04572365864264,1.0389402227978,0.973447578406546,2.44414473240759,0.373220911830279,0.252722758433675,1.47309299120532,2.60240885925407,1.60931473103431,3.06105620669094,2.71268672104287,4.83059143974428,4.35586648968489,3.65436725782942,1.03481348295606,3.44908788692548,4.16033376369202,1.58356011747554,1.09597866213787,1.94633074457919,0.696504333044333,0,1.99034266818493,0,0,0,1.44988040774851,2.34526059981096,0.900310307305074,2.13070262026689,0.787056926989615,0.308534225774757,1.62773761325285,1.07309360559848,0.700592054203017,0.658239399653922,0.32833492815819,0.729619285912702,0.438599962275997,0.219550115291051,0.536825675041487,1.05144974282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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:99683 | |||
|HGNC= | |||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80ZX0,uniprot:Q3U882 | |||
|association_with_transcript=80bp_to_ENSMUST00000001079,ENSMUST00000098616,NM_207209,uc008rit.1_5end | |||
|cluster_id=chr3:129763728..129763744,- | |||
|description=CAGE_peak_4_at_Sec24b_5end | |||
|id=chr3:129763728..129763744,- | |||
|ontology_enrichment_celltype=CL:0000540!1.87e-15!33;CL:0000047!1.87e-15!33;CL:0000031!1.87e-15!33;CL:0000404!1.87e-15!33;CL:0000221!9.18e-13!44;CL:0000133!9.18e-13!44;CL:0002319!1.95e-12!43;CL:0000117!4.38e-12!23;CL:0000337!4.38e-12!23;CL:0000393!6.91e-12!39;CL:0000211!6.91e-12!39;CL:0000055!2.92e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.56e-19,33;CL:0000047,1.56e-19,33;CL:0000031,1.56e-19,33;CL:0000404,1.56e-19,33;CL:0000393,1.91e-15,39;CL:0000211,1.91e-15,39;CL:0000221,3.74e-15,44;CL:0000133,3.74e-15,44;CL:0000117,8.25e-15,23;CL:0000337,8.25e-15,23;CL:0002319,1.04e-14,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.33e-22!102;UBERON:0000924!7.33e-22!102;UBERON:0006601!7.33e-22!102;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0000073!5.94e-20!75;UBERON:0001016!5.94e-20!75;UBERON:0000033!1.91e-17!63;UBERON:0002346!7.26e-17!71;UBERON:0003075!7.26e-17!71;UBERON:0007284!7.26e-17!71;UBERON:0003056!1.18e-15!49;UBERON:0001049!2.04e-13!52;UBERON:0005068!2.04e-13!52;UBERON:0006241!2.04e-13!52;UBERON:0007135!2.04e-13!52;UBERON:0000153!3.36e-13!94;UBERON:0000955!9.75e-13!50;UBERON:0006238!9.75e-13!50;UBERON:0002616!2.99e-12!49;UBERON:0007811!7.54e-12!86;UBERON:0002020!2.05e-11!34;UBERON:0003080!2.13e-11!40;UBERON:0002780!6.69e-11!39;UBERON:0001890!6.69e-11!39;UBERON:0006240!6.69e-11!39;UBERON:0000468!6.22e-09!333;UBERON:0002791!9.78e-09!29;UBERON:0003528!9.78e-09!29;UBERON:0001893!9.78e-09!29;UBERON:0000922!5.74e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.47e-21,95;UBERON:0000924,1.47e-21,95;UBERON:0006601,1.47e-21,95;UBERON:0001017,2.15e-21,73;UBERON:0001016,2.81e-20,75;UBERON:0002346,5.28e-19,64;UBERON:0003075,5.28e-19,64;UBERON:0007284,5.28e-19,64;UBERON:0010371,2.80e-16,73;UBERON:0003056,1.30e-14,49;UBERON:0000073,1.53e-14,54;UBERON:0010314,5.52e-14,92;UBERON:0001049,2.23e-12,52;UBERON:0005068,2.23e-12,52;UBERON:0006241,2.23e-12,52;UBERON:0007135,2.23e-12,52;UBERON:0002020,6.27e-11,34;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0002616,1.13e-09,46;UBERON:0003080,1.98e-09,40;UBERON:0002780,7.53e-09,39;UBERON:0001890,7.53e-09,39;UBERON:0006240,7.53e-09,39;UBERON:0003528,1.21e-07,29;UBERON:0002791,1.21e-07,29;UBERON:0001893,1.21e-07,29;UBERON:0000970,4.38e-07,9;UBERON:0000019,4.38e-07,9;UBERON:0000047,4.38e-07,9;UBERON:0010312,4.38e-07,9;UBERON:0004088,4.38e-07,9;UBERON:0002104,4.38e-07,9;UBERON:0001456,4.38e-07,9;UBERON:0003072,4.38e-07,9;UBERON:0004128,4.38e-07,9;UBERON:0003071,4.38e-07,9;UBERON:0000020,6.45e-07,12;UBERON:0001032,6.45e-07,12;UBERON:0004456,6.45e-07,12 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0.558405112967355,0.342401459862411,0.174840804837995,0,0,0,0,0.411343300817216,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,1.30815093828268,0.878744730937887,0.388859798148567,0.55994568650145,0,0.167782606057736,0,0,1.02903774414379,0,0,4.24864567805155,3.1739458756322,3.80298842103708,1.0165335962074,0.889294796111139,0,0,0,1.19840044207362,1.15265491596466,3.7328260431052,2.97013064329719,2.73422449756797,3.14216082844184,1.98781686856452,2.69479758272899,3.54628242767475,0.919218786610021,5.50579404996943,1.91531007127782,1.38245879930619,3.56092976871523,3.7509933876988,5.73004707612436,0.558365998002762,1.68828783009504,1.37518422999129,4.12480019663135,3.41692033917847,3.54158947068071,0.37863096666592,0.906858721281426,0.289864488701678,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0.776813650941515,0.445326417194474,0.346970653532272,0.304465478312141,1.15307748628029,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.433798070759735,0,0.808834249737046,0,0,0,0.292780797011547,1.04723353406728,0.255457055208591,0.239630249011841,0,0,2.69623150928681,3.20250421973039,2.89005009859588,1.91206752211504,2.04572365864264,1.0389402227978,0.973447578406546,2.44414473240759,0.373220911830279,0.252722758433675,1.47309299120532,2.60240885925407,1.60931473103431,3.06105620669094,2.71268672104287,4.83059143974428,4.35586648968489,3.65436725782942,1.03481348295606,3.44908788692548,4.16033376369202,1.58356011747554,1.09597866213787,1.94633074457919,0.696504333044333,0,1.99034266818493,0,0,0,1.44988040774851,2.34526059981096,0.900310307305074,2.13070262026689,0.787056926989615,0.308534225774757,1.62773761325285,1.07309360559848,0.700592054203017,0.658239399653922,0.32833492815819,0.729619285912702,0.438599962275997,0.219550115291051,0.536825675041487,1.05144974282064,4.01327988279209,0,0,1.2797295032114,1.16118335930219,0.902072229254653,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0,1.13800740571849,1.48523066392647,1.1270773567308,2.03651327845314,1.93952487167626,2.52488951605147,0.948548056863859,0.590440591918409,0.156998727841375,0,0,0.667380422864376,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0,0,0.482443521363367,0.184753190166605,0.37898282354097,1.79261474086228,1.01847051465113,0.469380496577004,0.837531287209079,0.714130922658041,1.17080188714679,0.788175720530955,0.664394068946325,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,1.44495530989013,1.40654023910644,0.655739781506702,0.252470927204373,1.26203287766503,1.17131623288992,2.36965737506079,1.43381278771531,3.34198011123591,2.54768877709949,3.23848561339915,1.46127928955656,1.18586333383957,2.57057053137446,0.851640511249612,2.49291845134157,2.11753047159649,0.659880491890142,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.36175842301515,2.52085531643834,0.905510786479282,1.92903331528433,1.77340233642274,1.60531935841864,1.31639216481697,0.913394847343798,0,0,0,0.65954501176592,0.968786560175433,0.663442174209714,0.358117032009409,0.984845398470368,0,0.556275906031529,0.170870880797853,0.619160603889667,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,3.00519193902079,1.42323626988794,0.648032044930808,0.418176592028937,0.655087691238533,0.134864346384821,0.826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0.56369293868419,0.897099276263873,1.15820943319968,1.36115831840833,1.16243841129958,1.01373675294467,1.99507305697782,1.3020438484395,0.838874755405687,0.483168241652012,0,0.948033361884535,1.21635129174099,1.02710957164827,1.29920822977795,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.304827226619999,0.504130925684203,0.584747284438515,0.288635524920988,0.701261413089414,0.680191150845634,0.887943813496259,0.717710852875806,0.503653849092235,0.386379188064381,0.187682475451182,1.28206136987086,0.214368379079066,0.501572104035363,1.6942555278512,1.38097570952153,1.71868654031819,3.43706364687375,0.685082519770642,0.755393897389701,0.675022500231806,2.70192721934532,0.906284817968409,0.51776031175182,2.49089634202024,3.59122386060928,1.87806966329548,0.486213434136588,1.25767897576789,0.919217542250071,0.888986911206461,1.64828045791115,0.64183841918363,0.758091635291392,1.52087579934144,1.32038438970253,2.06011316433741,1.28050304809739,1.66562859971278,0.476293691283074,1.50649623728312,1.54327376370964,0.8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| |||
|short_description=p4@Sec24b | |||
}} |
Revision as of 00:52, 6 August 2015
Short description: | p4@Sec24b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sec24b_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 80bp_to_ENSMUST00000001079, ENSMUST00000098616, NM_207209, uc008rit.1_5end |
EntrezGene: | 99683 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.56e-19 | 33 |
neuronal stem cell | 1.56e-19 | 33 |
neuroblast | 1.56e-19 | 33 |
electrically signaling cell | 1.56e-19 | 33 |
electrically responsive cell | 1.91e-15 | 39 |
electrically active cell | 1.91e-15 | 39 |
ectodermal cell | 3.74e-15 | 44 |
neurectodermal cell | 3.74e-15 | 44 |
CNS neuron (sensu Vertebrata) | 8.25e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-15 | 23 |
neural cell | 1.04e-14 | 43 |