FFCP PHASE1:Hg19::chrX:76937858..76937877,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=886 | |||
|TSSclassifier=not | |||
|UniProt=P46100 | |||
|association_with_transcript=345bp_to_U09820_5end | |||
|description=CAGE_peak_5_at_ATRX_5end | |||
|id=chrX:76937858..76937877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.15e-14!235;DOID:14566!2.92e-14!239;DOID:0050687!4.66e-09!143;DOID:0050686!4.33e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.87e-07;34!UBERON:0002020;1.87e-07;34!UBERON:0000073;4.01e-07;53!UBERON:0002616;4.01e-07;53!UBERON:0002619;6.11e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.08e-10,89;UBERON:0002346,3.68e-10,86;UBERON:0000073,8.60e-10,53;UBERON:0002616,8.60e-10,53;UBERON:0000955,1.19e-09,68;UBERON:0006238,1.19e-09,68;UBERON:0001017,1.61e-09,81;UBERON:0002780,3.75e-09,41;UBERON:0001890,3.75e-09,41;UBERON:0003080,3.75e-09,41;UBERON:0006240,3.75e-09,41;UBERON:0001049,7.26e-09,56;UBERON:0005068,7.26e-09,56;UBERON:0006241,7.26e-09,56;UBERON:0007135,7.26e-09,56;UBERON:0003528,9.40e-09,34;UBERON:0002020,9.40e-09,34;UBERON:0003075,1.17e-08,82;UBERON:0007284,1.17e-08,82;UBERON:0003056,2.15e-08,61;UBERON:0004121,3.78e-08,171;UBERON:0000924,3.78e-08,171;UBERON:0006601,3.78e-08,171;UBERON:0002791,2.14e-07,32;UBERON:0002619,2.62e-07,22;UBERON:0000956,5.98e-07,25;UBERON:0000203,5.98e-07,25;UBERON:0001950,7.11e-07,20;UBERON:0010371,7.60e-07,104 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,1.80808358407193,0,1.46379839637152,0,0.408001382488506,0,1.14494394852423,0.821246550437305,0.87879847716362,0.916960868975415,0.656804715599566,1.10195093839151,0,0,0.154816123316076,0,0,0,0.92960640696362,0.568676929949686,0,0.553995408531877,1.20326668482085,1.51907609501096,0.223915474239924,0,0.257575567634187,0.436194716338694,0,0,0.464858073811369,0,0,1.1507695692886,0.512321413058201,0,0,0,0,0.188242339542605,0.545812300115692,0,0.918251677112708,0,0.639337125799041,0,0.797854630486527,0.426224750532694,0.870627715885752,0.56738522469114,0,0,2.60741459210101,0,0,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.600707571366025,0.48217676009124,0.570025487482497,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,2.29363936875137,0,0.560508562981536,0,0.983548850569165,0.786021525498329,1.85041349099558,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0.541607727530031,1.28091319725675,1.56071217071854,1.80881695064044,1.10540007114339,0.579606171470105,0.889719378972363,0.267540828089713,0,0.453237370790265,0.383220493601921,0,1.01207876807801,0,0,0.950452044448374,0,0,0,0.947109008176067,0.821127996921047,1.61285394579786,1.06976078313403,2.02754165435919,0,0.670700859703636,0.383587685530591,0.361439152384566,0,2.02785126545153,0,0,1.03988298880475,1.33037638477538,1.66886092816939,0,0,0.370784442784429,0.324547393654683,0.348259474598534,0.398873881556595,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.732186172644509,0,0,0.625098097988558,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.662045904066094,2.0078563452417,1.41867352879343,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,1.72852777344,0,0,0,0.448346041655403,0,0,0.140450806702248,0.61246251376468,0.982674538494144,0.206651562351531,0,1.23633464639278,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0.113432183160021,1.97328599257748,1.06778694409284,0,0,0.103052529238439,0.772921620136887,0.18611685633159,1.68776332241266,0.389748020644795,1.26216887122057,0.552299391853796,0,1.77504796258307,0.503760491138201,0.67824236924195,0,0.272746120590835,0.286804595389004,0.243947412259191,0.662648841607426,0.348581828608555,0.621966330092223,1.51392510525377,0.36497735907583,0,1.28648187638577,0,0,1.44375896333917,0.709840800239063,0.337169380156203,0,0.661763836394364,0.435758888184812,0,0.539325232640658,0.196221465125346,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0.441463099414651,0.368965315629341,0,0.548751427043128,0,1.00528972411631,0.648119116109707,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,1.00789276919316,0.425325291727159,0.806026704325635,0,0,0.492663237895943,0.704387472105808,0.414656231081544,0.432359860250884,0.12624243342638,0.253991577168676,0,0,0,0.308482478109971,0,0.571652865261156,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0,0.714889968290738,0.542621605391443,0,0.65147236858747,0.710783897485092,0,0.301439377059586,0,1.59956785891291,0,0,0,0.479249710983165,0,0,0.289562613335158,1.43833425785268,0.358121926479791,0.224170287987055,0.985153801009636,0.646882724578552,1.54011643535698,0.508189248444927,1.30139853857622,3.09315525111078,1.17261385734044,0.637938751653163,1.49801404789436,2.99161459204025,0.414415513436035,1.47229790062968,1.00034104211935,0.271265023699736,1.03985430765404,0.535286966391485,0.630809660135739,0.702848489956279,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0.82707210449155,0.647142602455851,0.426910231213777,0,0,0,0,0.61384789315225,0.561320188866147,0.256278298511402,0.511707249066704,1.12597744800525,0,0.616838775210622,0.355123450626254,0.739144404124282,1.03850885836724,0.464841513839837,0.362578348774867,0.40101294060657,1.56537681191024,0.114814448164607,0.728364672026868,0.786746489756545,0,0.539107359730903,0,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0.650756789328606,0.9273691048295,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0.275673144969061,0.859361958946189,0.290033387828457,0.255679882248303,0.801288320820636,0.495854746082934,0.192190067365106,0.638063562472921,0.4046311234222,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,1.21856744815642,0,0.409499734223957,1.83827061539827,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.573645408816206,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.096222112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| |||
|short_description=p5@ATRX | |||
}} |
Revision as of 06:09, 23 January 2014
Short description: | p5@ATRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATRX_5end |
Coexpression cluster: | NA |
Association with transcript: | 345bp_to_U09820_5end |
EntrezGene: | ATRX |
HGNC: | 886 |
UniProt: | P46100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.08e-10 | 89 |
neurectoderm | 3.68e-10 | 86 |
regional part of nervous system | 8.60e-10 | 53 |
regional part of brain | 8.60e-10 | 53 |
brain | 1.19e-09 | 68 |
future brain | 1.19e-09 | 68 |
central nervous system | 1.61e-09 | 81 |
regional part of forebrain | 3.75e-09 | 41 |
forebrain | 3.75e-09 | 41 |
anterior neural tube | 3.75e-09 | 41 |
future forebrain | 3.75e-09 | 41 |
neural tube | 7.26e-09 | 56 |
neural rod | 7.26e-09 | 56 |
future spinal cord | 7.26e-09 | 56 |
neural keel | 7.26e-09 | 56 |
brain grey matter | 9.40e-09 | 34 |
gray matter | 9.40e-09 | 34 |
neural plate | 1.17e-08 | 82 |
presumptive neural plate | 1.17e-08 | 82 |
pre-chordal neural plate | 2.15e-08 | 61 |
ectoderm-derived structure | 3.78e-08 | 171 |
ectoderm | 3.78e-08 | 171 |
presumptive ectoderm | 3.78e-08 | 171 |
regional part of telencephalon | 2.14e-07 | 32 |
regional part of cerebral cortex | 2.62e-07 | 22 |
cerebral cortex | 5.98e-07 | 25 |
pallium | 5.98e-07 | 25 |
neocortex | 7.11e-07 | 20 |
ecto-epithelium | 7.60e-07 | 104 |